Poecilia reticulata (guppy): 103467454
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Entry
103467454 CDS
T05149
Symbol
ddx20
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pret03041
]
103467454 (ddx20)
Enzymes [BR:
pret01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103467454 (ddx20)
Spliceosome [BR:
pret03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
103467454 (ddx20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_19
Motif
Other DBs
NCBI-GeneID:
103467454
NCBI-ProteinID:
XP_008412071
UniProt:
A0A3P9Q0Z3
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Position
LG7:24739273..24745885
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AA seq
764 aa
AA seq
DB search
MAASMRRAAHDIETRKRTEDVLLAEGIDFGSLLLSQAVLDGLSSAGFQKPSPIQLKAIPL
GRCGLDLIVQAKSGTGKTCVFVTIALDSLILENPSTQVLVLAPTREIAVQIHSVVMAIGC
AMEGLECHVFIGGRPVSQDKAHLKKCHIAVGSPGRIKQLIELGMLSTGSVRLFVLDEADK
LLEEGSFQEQINWIFSSLPVNKQMLALSATYPESLAQHLTRYMNEPTFVRLNPSDMGLKG
LKQYYKLLPSHPLPHKVFEEKVQHLLELFSKIPFNQALVFSNLHTRAQHLADILSSKGLP
AVCISGGLSQDQRLEAMSKLKQYQCRVLISTDLTSRGIDAEKVNLVINLDVPQDWETYMH
RIGRAGRFGTQGMAVTYCCHGEEENKMMAIAQKCGLSLSALPSALEPGLMDEPCDWDVCA
DAAAPDTISPLISRTVKKKRTKVEAPASDVTRDEAGESSNQRPDKTQTATLTPRHEEEGE
RQVTSIGVKRQQQQQHRPSEVAPTRKELQDALPKIPPLSSFKTSRSTFVTLEEAELDFHT
FITAGLGRTVEVIREFRGRESGDETSYNEHITLHDDGAAALTQSSKWLQSLSDSSSSDVG
VRPEGLHETTEAEQKTVFKHGTGSASTVPKSSAAGVYQQETCTTITRAPPEPQSNESVRR
KQASQNTPGQNRREKSAKIKDSRKLAEKIKREPKRETDEEECMEAEEDWSSEAYWKACYE
AWSDYYSAMSAFPEQGYQSYYSVAHNWMAAYRMNAVYMQELMKH
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctccatgaggagagcagctcacgacatagaaacgcgaaagaggaccgaagat
gtgcttctggcggaggggattgacttcggctctctgctgttgtctcaggccgtgctggac
ggactgtcctccgcggggtttcagaaaccgtccccgatccagctcaaggcgatcccgctg
ggccgctgcggactcgatttgattgtacaagccaagtctgggacaggaaagacatgcgtg
ttcgtcaccatcgccctagactctcttattttggagaatccctccactcaggttctcgtt
ttggctccgacacgtgagatcgccgtgcagatccactcggtggtgatggccatcggctgc
gccatggagggcctggagtgtcatgttttcatcggggggcggcctgtgagccaagacaaa
gcccatctgaagaagtgtcacattgccgtgggctcgcctggtcggatcaagcagctgatt
gagctgggcatgttgtccaccggcagcgtcaggctgtttgtcctggacgaggcagacaag
ctgctggaggagggcagcttccaggagcagatcaactggatcttctcgtccctgcctgtc
aacaagcaaatgcttgcgctctctgccacctacccagaatcccttgctcaacaccttacc
cgctacatgaacgagcccacttttgttagactcaatccgagcgacatgggcctgaaaggt
ctgaagcagtactacaagctgctgccgtctcatccgctgcctcacaaagtctttgaggag
aaggtgcagcacctgctcgagctgttcagtaaaatcccattcaaccaagcgttggtgttt
tctaacctccacaccagggctcagcacctggcagacatcctgtcctccaaaggcttacct
gcagtttgtatttcaggtggtttgagtcaggaccagaggctcgaggcgatgtccaagctg
aagcagtatcagtgcagagttctcatctccaccgacctgacttccaggggaatagatgca
gagaaagtgaacctggtgatcaacctagatgtgccacaagactgggaaacctacatgcac
cgaatcggacgcgccgggcggtttggcactcaggggatggccgtgacctactgctgccac
ggggaagaggagaacaagatgatggccattgctcagaagtgtggcctcagtttgtctgct
ttaccttccgccttggagcctggtttgatggatgagccgtgcgactgggacgtgtgcgcc
gacgctgctgctccagacacgatatcgccgctgatttccagaaccgtaaagaaaaagcgt
acaaaggtcgaagctccggcgtctgatgtcaccagggatgaagctggagagtccagcaat
cagaggccagataaaacccaaacagcaaccctgacaccacggcatgaagaagagggtgaa
aggcaggtgacttctatcggggtgaagaggcagcagcagcagcagcatcgtccttctgaa
gtggcgccaactcgtaaagagctacaagacgccctgccaaagatcccgcccctcagctca
ttcaagaccagccggtcaacatttgtgacgttggaggaggcagagctggacttccacacc
ttcatcactgcaggtttggggaggacagtagaggtcatcagggagttcagaggcagagag
tccggagatgagactagctacaatgagcacatcacactgcatgatgacggggccgcggct
ttgacccaaagcagtaaatggttacagtcactttctgattcctccagctcagacgttggt
gtcagacccgaaggtttgcacgagaccacagaagcggagcaaaagacagtttttaagcat
ggcactggatctgcatctaccgtgcccaaatcctctgcagccggagtctaccagcaggaa
acctgcacaacaatcacgagagctccacctgagcctcagagcaacgagtctgtaagaagg
aagcaagccagtcagaacacaccagggcagaatcgcagggagaagtccgcaaaaataaaa
gacagcagaaagttggcagagaagattaaaagagagccgaagagggagaccgatgaagag
gagtgcatggaggccgaggaggactggagctctgaggcgtactggaaagcctgctatgaa
gcctggagcgactactactctgctatgtcggcttttccagagcagggctaccagagctac
tacagcgtagctcacaactggatggccgcgtatcgcatgaatgcagtctacatgcaggaa
ctcatgaaacactaa
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