Poecilia reticulata (guppy): 103467561
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Entry
103467561 CDS
T05149
Symbol
mbd4
Name
(RefSeq) methyl-CpG-binding domain protein 4
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
103467561 (mbd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pret03036
]
103467561 (mbd4)
03400 DNA repair and recombination proteins [BR:
pret03400
]
103467561 (mbd4)
Chromosome and associated proteins [BR:
pret03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
103467561 (mbd4)
DNA repair and recombination proteins [BR:
pret03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
103467561 (mbd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
103467561
NCBI-ProteinID:
XP_017161190
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All DBs
Position
LG7:complement(21867113..21874508)
Genome browser
AA seq
452 aa
AA seq
DB search
MDVQSNKEALPHGWVREVRQRKAGKTAGKLDVYIISPSGQRFRSKSSLHDYLLKNGGENL
DINLFDFTSSKTKFITSETDQSKGTQEKWTKKQANGQQDKTGGKVKSARHKSKNSFSSTR
CKVSKSKITPAVEDTKSNTLQEDVAEEAGPISSQATSSSDLAVDDHTPQSPRRVGLLREK
ILRLAPSSDQQNTFLPAHRNQPANAPPSVPTLSVEAATESENESENVANTDVAQPHSKGD
NKSNSEVVDNADSHREEEVLPDNSGGSCTPVRDSHNRSKNLESRRKTSPYFSAKRLKDGL
SPPRRKSLRKWTPPRSPFNLIQETLFHDPWKLLVATIFLNKTSGKMAIPVLWVFFERYPS
AEVTREADWKPMSELMKPLGLYELRAKTIIRFSDEFLNKQWRYPVELHGIGKYGNDSYRI
FCVEEWRQVTPEDHKLNKYHAWLWENHKTLGI
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggacgtccagagtaacaaggaagcactgccacatggatgggttagagaagtgaggcag
agaaaagctggcaagactgcaggaaaactggacgtgtacataataagtcccagtgggcag
aggttccggtctaagtcgtccttgcatgattatctgttaaaaaatggaggagagaacctg
gacataaacctgtttgatttcacctcatccaaaactaagttcatcacctctgaaacagat
cagtccaaaggaacgcaagagaaatggacgaaaaagcaagcaaatggacagcaggataaa
acaggtggaaaagtgaaatctgccagacataaatctaaaaacagcttttcctctaccaga
tgtaaagtcagcaagagcaagataacgcctgctgttgaggatactaaaagtaatactttg
caagaggacgtagctgaggaggctgggccgattagctcacaagctacatcttcatcagac
ttggcggttgatgatcatacaccccagagcccccggagggtgggactgttgagggagaaa
attctgagactggctccttccagtgatcaacaaaacaccttccttccagctcacaggaat
cagccggcaaacgcgccgccttcggtcccgactctgagtgttgaagctgccactgagagc
gagaatgaaagtgagaacgtggcaaacacagatgttgcacagcctcacagcaaaggtgac
aacaagtctaattcagaggtagtggataatgctgacagtcacagagaggaggaggtgtta
cctgacaacagtggtggaagctgcacaccagttagagattcccataatagatccaagaat
ttggagagcaggcggaaaacaagcccttatttcagtgcgaaacgtctcaaagatggactc
agcccacccaggaggaaatctctcagaaaatggacacctccccggtctcccttcaacctc
atacaggaaacccttttccatgacccctggaagctcctggtggccactatttttctgaat
aagacaagtgggaaaatggccattccggtgctttgggtgttctttgagcgctacccgtct
gcagaggtgacccgggaggccgactggaagcccatgtctgaactcatgaagccacttggg
ctctatgagcttcgagccaaaacaatcatccgcttctccgatgagtttttaaataaacag
tggcgttaccctgttgagttgcacggtattggcaagtatggaaacgactcctacaggatc
ttctgtgttgaagagtggaggcaggtgactcctgaagatcacaagttaaataaatatcat
gcctggctgtgggagaaccataaaacgttgggaatatga
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