Poecilia reticulata (guppy): 103467730
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Entry
103467730 CDS
T05149
Symbol
ddx39a
Name
(RefSeq) ATP-dependent RNA helicase DDX39A
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pret03041
]
103467730 (ddx39a)
Enzymes [BR:
pret01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103467730 (ddx39a)
Spliceosome [BR:
pret03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
103467730 (ddx39a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
103467730
NCBI-ProteinID:
XP_008412609
UniProt:
A0A3P9PV73
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All DBs
Position
LG1:complement(25084057..25091285)
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AA seq
427 aa
AA seq
DB search
MAENDVDNELLDYEEDDEPQGLPESGTPANKKEVKGSYVSIHSSGFRDFLLKPELLRAIV
DCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCH
IRELAFQISKEYERFSKYMPNVKVSVFFGGLAIKKDEEVLKKNCPHIVVGTPGRTLALIR
NKTLSVKNIKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQVMMFSATLSKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYCKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVNRCV
ALSQLLVEQNFPAIAIHRGMGQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAITFVSDETDAKTLNEVQDRFEVNVAELPDEIDIS
SYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaatgacgttgataatgagcttctggactacgaggaggacgacgagccccag
gggctcccagaaagcggcacccctgccaacaagaaggaggtgaaaggttcctatgtgtcc
atccacagctcgggcttcagagacttcctcctcaaaccagagctgctccgcgccattgtt
gactgcggttttgagcatccttcagaagttcaacatgagtgcattcctcaagctatcctt
ggcatggatatcctctgccaggcaaagtctggcatgggaaagacggctgtgtttgtgttg
gccacattgcagcagattgaacctgtggatggccaggtctctgttcttgtgatgtgccac
atacgagaattggccttccagattagcaaagagtacgagcgcttctccaagtacatgccc
aacgtcaaggtgtccgtgttctttggcggcctggccatcaagaaggacgaggaagtcctg
aagaagaactgccctcacatcgttgtaggaactccaggccgcacgctggccctcattcga
aacaagactctgagcgtgaagaacatcaaacactttgtgctcgacgagtgcgacaagatg
ctggagcagctggacatgaggcgtgatgtgcaggagatcttcagactgacacctcatgag
aaacaagttatgatgttcagcgcaacactaagcaaggagatccgccccgtctgccgcaag
ttcatgcaagatcccatggaagtatttgtggacgacgagacgaaactgacactgcatggc
ttacagcagtattactgcaagctgaaggacagcgagaagaacaggaagctgtttgacctc
ctcgatgtgctcgagttcaaccaggtggtgatctttgtgaagtctgtgaatcgttgcgtt
gccctgtcgcagctgctggtggagcagaacttccccgccatagcaatccaccgggggatg
ggacaggaggagaggttgtcccggtaccagcagtttaaagacttccagaggcggatcctg
gttgccactaacctgttcggccgaggaatggacatcgagagagtcaacatagtcttcaac
tacgacatgcctgaggactctgacacatacctccacagagtggcccgtgcaggcaggttt
ggaaccaaaggcttggccatcacctttgtttcagacgagactgacgccaagaccctgaat
gaagtccaggatcgcttcgaggtcaacgtggctgagctgccagacgagatcgacatctcc
tcctacattgaacagtccagatga
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