Poecilia reticulata (guppy): 103467822
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Entry
103467822 CDS
T05149
Name
(RefSeq) ATP-dependent RNA helicase DDX19A-like isoform X1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03013
Nucleocytoplasmic transport
pret03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103467822
03015 mRNA surveillance pathway
103467822
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pret03019
]
103467822
Enzymes [BR:
pret01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103467822
Messenger RNA biogenesis [BR:
pret03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
103467822
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
Motif
Other DBs
NCBI-GeneID:
103467822
NCBI-ProteinID:
XP_008412741
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All DBs
Position
LG7:complement(15226456..15231343)
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AA seq
496 aa
AA seq
DB search
MAEDSWALAVDEQEATTPSFQFQFSKRINRIRAPLNVKEDINANVVQNKIPDEGGEGDGD
KVDLAEQSLLNKLIRHSLVKNRNQVEVQQADPNSPLFSVKTFQELRLKPELLQGVFNMGF
NRPSRIQENALPLMLAEPHQNLIAQSQSGTGKTAAFSLAMLSHVNPDNTWTQCLCVAPTY
ELALQIGQVIEQMGKFCPSVKLAYAIRGNRMDRRVKLQEHIVIGTPGTILDWCTKYKLID
PKKITMFVLDEADVMIAMQGHRDQSIRIHRLLNKNCQMLLFSATFEDSVMKFAERVIPDP
NIIRLKREEETLDTIKQFYVLCREKEDKFTALCNLYGCLTIAQAMIFCHTRKMAGWLACS
LIKEGHQVALLSGEMAVEQRAAVIERFKNGREKVLVTTNVCSRGIDVEQVSLVVNFDLPV
DVEGNADNETYLHRIGRTGRFGRRGFAVNMVDSENSMEIIKQIEMHFRKSQNSIPAILRK
WRRWQFNVLLLSMCNS
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagactcttgggcattagcagtggacgagcaagaggcgacaactccatcattt
cagtttcagttctccaaaaggatcaacagaatacgagctccattaaacgtgaaggaagat
ataaatgccaacgtggtgcagaacaagatcccggatgaagggggtgaaggagacggcgac
aaagttgacctggccgaacagtctttgcttaataaattgatccgccactctctggtgaag
aaccgaaaccaagttgaggtccaacaggcggatcccaactctcctctgttctccgtgaag
actttccaggagctcagattgaaacctgaattgttgcaaggtgttttcaacatgggattc
aacagaccgtccaggatccaggagaatgctttgcctctgatgctggctgaaccacatcag
aacctgatcgctcagtcacagtctggcactggtaagactgcagctttctctctggccatg
ctgagtcatgtgaaccctgacaatacctggactcagtgtctttgtgttgcgccaacgtac
gagctcgcgttgcagatcggccaagtgatcgaacaaatgggcaaattctgtccaagtgtg
aaactggcctacgccattcgagggaacagaatggaccgacgtgtcaagttgcaagagcac
attgtcattggaaccccaggcaccatccttgactggtgcaccaagtacaagcttattgat
ccaaagaagatcacaatgtttgtgttggacgaagctgatgtgatgatcgccatgcagggt
catcgggaccagagcatccggatccacaggctgctcaacaaaaactgtcagatgctgctg
ttctctgcaacatttgaggactctgtgatgaagtttgccgagcgagtgattcccgatcca
aatataatccggctgaaacgagaagaggagacgctggacacaatcaagcagttctatgtg
ctctgcagggagaaggaggacaagttcacagctctctgtaatctgtatgggtgtctgact
attgcacaggcaatgatcttctgccatactcggaagatggctggctggctggcctgtagt
ctgataaaggagggccaccaggtggcgctgctgagcggggaaatggcagtggaacagaga
gccgctgtcatcgaacgcttcaaaaacggcagagagaaagtgcttgtgaccaccaatgtg
tgttcccgaggtattgatgtggagcaggtgtcccttgtggtgaattttgacctcccggtg
gatgtggaagggaacgccgacaatgaaacatacctgcacaggatcggccgaacgggacgc
ttcggcagacgaggatttgcggttaacatggtggacagcgaaaacagcatggaaatcatt
aagcaaattgaaatgcatttcagaaaatcacaaaactcgataccagcaatcttgaggaaa
tggagaagatggcaatttaatgttctgttgctttccatgtgcaacagttga
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