Poecilia reticulata (guppy): 103467941
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Entry
103467941 CDS
T05149
Name
(RefSeq) cadherin-4-like
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret04514
Cell adhesion molecule (CAM) interaction
pret04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
103467941
04519 Cadherin signaling
103467941
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pret04515
]
103467941
Cell adhesion molecules [BR:
pret04515
]
Cadherins
Major cadherins
103467941
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Ig_CLSTN
Cadherin_FAT4_N
F59B103_C
Cadherin_CELSR2_9th
DUF2254
DUF5527
Motif
Other DBs
NCBI-GeneID:
103467941
NCBI-ProteinID:
XP_081465251
LinkDB
All DBs
Position
7:complement(22890439..23148547)
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AA seq
934 aa
AA seq
DB search
MRTDFAVVLTAALLFDSIWRNNGEHASQGPCRPGFSQSFYSVQISRDVLQGQGVLKGTAV
SPQKVKFDDCMGNEAVVFQSTDPVFNVRTDGSIFAKGQGAGLDETVQFKVTARGPHTNVW
ETLVQLTLIDLSSSGQNENEVTEEAGNISEQNKKKDASQAPTPVIMFSGSRVNSTGGLRR
QKRDWVIPPINVAENSRGPFPQMLVSIRSDQDQDISIRYSITGVGADQPPNEVFSIDPVL
GKMFVTKPLDREHRSSYHLRAHAVDMNGNQVENPIDLYIFVIDMNDNRPEFKNQVYNGSV
DENSKPGTYVMHLSAFDADDNTTANGMVRYRILSQTPHSPIPNMFTINSETGDIMTVAPG
LDREKVSQYTIIVQATDMEGNLNFGLSNTATAIITVTDINDNPPMLTSRTFSGEVPENTE
DVAVANLTVIDADQPHSPNWNAIYRIIGGDPTGHFTIRTDPVSNDGMVTVVKPVDFEMNR
AFMLTVVVSNQAHLASGIQSSLQSTAGVTISVKDVNEPPYFPTNPKQIRFEEGVPTGTSL
TTFSASDPDRLQMQQIIRYSKLNDPANWLSINRTSGQIVTTGMLDRESVYVKNNIYEATF
LATDNGSPEASGTGTLQIYLIDINDNPPALVPRESQICERMNKNVNGVNITAADADTDPN
AGPFVFELPNFPSSIRRNWTIARISGDYARLALRYQVYLEPGMYEVPIIVSDSGNPPLSN
RSVIKVKVCPCDDNGDCTTLGAVAAAGLGTGAIIFILICIIILLCMVLLFVVWIKRREKE
RQTKQLLIDPEDDVRDNILKYDEEGGGEEDQDYDLSQLQQPDSLEHIISKPPGVRRVDER
PIIPESQYPIRPVVPHPGDIGDFIHEGLRAADNDPTAPPYDSLLVFDYEGSGSTAGSVSS
LNSSSTGDQDYDYLNDWGPRFKKLADMYGGGDDD
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgaggactgacttcgcagtggtcctgacagcagctcttctttttgattcaatttggagg
aataatggggagcacgcctcccaaggtccctgtcgacctggcttctcgcaaagcttctac
tccgtccagatatcgagggatgtactgcaaggccagggcgtacttaaaggtactgcagta
tcaccgcaaaaagtgaagtttgacgactgcatggggaatgaggccgtggttttccagagc
accgacccggtcttcaacgtccggacagatggatccatctttgccaagggacagggagcc
ggcttggatgagacagttcagtttaaagtgacagcgcgtggccctcacacaaatgtctgg
gagactttggttcaactgaccctgattgacctgtcgtcatcagggcaaaatgaaaatgag
gtcacagaggaagcagggaacatcagtgagcaaaacaagaagaaggacgcgtcgcaggca
ccaactcctgtcatcatgttctcagggtcccgcgtcaacagcaccgggggtctccgaagg
cagaagagagactgggtgatcccaccaatcaacgtggcggaaaattctcgtggaccattc
cctcagatgctcgtcagtattcgttccgaccaggaccaggacatttcaatccgatacagc
attactggggtgggagcggatcaaccacccaatgaggtgttcagcatcgacccagtgctc
ggaaagatgtttgtcaccaaacctttggatcgagaacatcgatcttcttatcatctgcgg
gcccatgcagtggacatgaatgggaaccaggtcgagaacccgattgatctgtacatcttc
gtcatcgacatgaatgacaacagaccagagttcaaaaaccaggtctacaatggttctgtg
gatgaaaattctaaaccaggaacttatgtgatgcatctatctgcatttgatgccgatgac
aacaccacggctaatggaatggtgcgctatcggatcctgtcccagacaccgcacagcccc
atccctaacatgttcaccatcaacagtgagacgggggacattatgacagtggcgcctgga
ctcgacagagagaaagtgtcccagtacaccatcattgtgcaagccactgacatggaggga
aacctcaactttggcctttccaacacagccactgccatcatcactgtcacggacatcaac
gataatcctcccatgctgacctcaagaactttttctggcgaggtcccagagaacacagag
gatgttgcggtggctaatctgactgttatagatgctgaccagcctcactctcctaactgg
aacgccatttacaggatcataggtggggacccaactgggcactttaccatccgcactgat
cccgtttccaacgacggcatggtcaccgtggtgaagccagtcgatttcgagatgaaccgg
gccttcatgctgacagtggtcgtgtcaaaccaggcccacctggccagcggcatccagtct
tcactccagtcgactgctggagtcaccatatctgtgaaggacgtcaacgagcccccttac
ttccccaccaaccccaagcagatccgatttgaggaaggcgttcccactggcaccagcctg
accactttctcggcttcagatcctgacagactccagatgcaacagataatcaggtattca
aagctgaacgacccggcaaactggctgtctatcaacagaaccagcggtcagattgtaaca
actggaatgctcgaccgggagtccgtctacgtaaaaaacaacatatacgaagctacgttt
ctggctacagacaatggctctcctgaagccagcggcacaggcacattgcagatctatttg
atagatattaatgacaaccccccggcgctcgtaccaagggagtctcagatctgcgaaagg
atgaacaaaaacgtcaatggtgtcaacatcactgccgccgatgctgacacggatcccaac
gctggaccctttgtcttcgagctgcccaacttccccagcagcatccgacgcaactggacc
attgcacggatcagtggtgattatgcccgtctcgctcttcggtaccaggtctacttagaa
ccaggaatgtacgaggtccctatcattgtgtcagactctggcaaccctccgttgtccaac
aggtctgtcatcaaagtgaaggtttgtccgtgcgatgacaatggagactgtaccacactt
ggtgctgtcgcggccgctggcctggggactggagccatcatcttcatcctcatctgcatc
atcatactgctgtgcatggtgctgttgtttgtggtgtggatcaagcgcagggagaaggag
aggcagacgaagcagctgctgattgacccagaagatgacgtccgagacaacatcctcaaa
tacgacgaggagggcggaggagaagaggatcaagactacgacttgagccagctgcagcag
cccgactctttagaacacatcatcagcaagccgcctggcgtacgcagagttgacgagagg
cccatcatcccagagtctcagtacccaatcagaccagttgtgccccatcctggagacatc
ggagactttatccatgagggtctgcgggctgcagacaacgaccccacagcccctccgtat
gattccctgctcgtttttgactatgaaggcagcggctccaccgccggctcagtcagctcc
ctcaactcctccagcacaggagaccaggactatgactacctcaatgactggggaccccgt
tttaagaagttggctgacatgtacgggggtggggatgacgattaa
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