Poecilia reticulata (guppy): 103468401
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Entry
103468401 CDS
T05149
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103468401
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pret03041
]
103468401
03009 Ribosome biogenesis [BR:
pret03009
]
103468401
Enzymes [BR:
pret01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103468401
Spliceosome [BR:
pret03041
]
Complex A
U1 snRNP components
U1 related factors
103468401
Complex B
103468401
Ribosome biogenesis [BR:
pret03009
]
Eukaryotic type
Pre-60S particles
Helicases
103468401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
103468401
NCBI-ProteinID:
XP_008413683
UniProt:
A0A3P9PM67
LinkDB
All DBs
Position
LG8:7317777..7323326
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AA seq
636 aa
AA seq
DB search
MPGYSDRDRGRDRDRGYGGGPPRFGGSRSGGGGGGKFGNPGERLRKKHWNLDELPKFEKN
FYQQHPDVAHRSLQEAEQYRRSKTITVKGRDCPNPITQFHEASFPSYVMEVINKMNWTEP
TPIQAQGWPLALSGMDMVGIAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTR
ELAQQVQQVAAEYGRASRLKSTCIYGGAPKGPQLRDLERGVEICIATPGRLIDFLEAGKT
NLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEY
VQINIGALQLSANHNILQIVDVCNDGEKENKLIRLLEEIMSEKENKTIIFVETKRRCDDL
TRRMRRDGWPAMGIHGDKSQQERDWVLNEFKFGKAPILIATDVASRGLDVEDVKFVINYD
YPNNSEDYIHRIGRTARSQKTGTAYTFFTPNNMRQAGDLVSVLREANQAINPKLLQMAEE
RGGRSRGGRGGDYDRRDRYSSGRRDYGGGRDRDNNRGYNNGPNKSYGAGSQNGGYGGSNG
ASNGYGGGNYNTNGQSNFGTNQAGAFVAQNNFQAQQFVPNKLIAQNGTSHPQYQFPQAQV
PPQHPPQPQHPPQQLGPQQHPPPPLVPYPMPPQFAQ
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgcctggatattcagacagagaccgcggcagagatagagacagaggctatggcggtggt
ccaccccgattcggtggcagccggagtggaggtggaggtggaggaaagtttggcaatcca
ggtgagcgattgaggaagaaacactggaacctggatgagctcccaaagtttgagaaaaac
ttctatcagcagcatcccgatgtcgcccatagatcactgcaagaagctgagcaatacaga
aggtccaaaactataacagtgaaggggagggactgcccaaatcccataactcagttccat
gaagcaagctttccctcttatgtgatggaggtcatcaataaaatgaactggactgaacca
acacctatccaggcccagggttggcctttggctctcagtggcatggacatggttggcatt
gcacagactggctctggcaagacactttcttatcttctgcctgcaatcgtgcacattaat
caccagcctttcttggaacgtggggacggtccaatttgtctggtgttggcccccactcgt
gagctggcccagcaggtgcaacaggtggctgctgaatatggcagagcttctcgtctgaag
tccacctgcatctacggaggcgcaccaaaagggcctcagctccgtgatttggaaagaggt
gtggagatttgcatcgccactccaggcaggctcattgacttccttgaagcaggaaaaacg
aaccttcgcagatgcacttayctggtgctggatgaggcagacagaatgctggacatgggg
tttgagccacagatcaggaagattgttgaccaaatcaggcctgacaggcagactctgatg
tggagtgctacttggcctaaagaggttcgccaactggcagaagactttctgaaagagtat
gttcagatcaacattggtgcactgcagcttagtgctaaccataacatcctgcagattgtg
gatgtctgcaatgatggagaaaaagagaataagctaatccgtctgcttgaggaaatcatg
agtgagaaggagaacaagaccatcatttttgttgagacaaaaaggcggtgtgatgacctc
actcgacgaatgagaagagatgggtggccagctatgggaatccatggtgacaaaagccag
caggaaagggactgggttcttaatgagttcaaatttggcaaagcccccatactgattgcc
actgatgttgcgtccagaggcctagatgtggaagacgtgaaatttgtcatcaactatgac
taccctaacaactctgaggactatatccaccgcattggcagaacggctcgtagccaaaag
acgggcacggcctataccttcttcactcccaacaacatgaggcaggccggggacctcgtc
tctgtgctgcgcgaggccaaccaggcaattaacccaaagctcctccagatggcagaagaa
agaggaggtcgttcaaggggcggcagaggtggtgactacgaccgtcgagataggtattcc
tctggaaggcgtgattatggcggbggtagggatagagataataatagaggatataacaac
ggaccaaacaagagctatggcgcaggttctcagaatggaggctatggaggcagcaacggt
gccagcaatggttacggtggagggaactacaacaccaatggacagtcaaactttggcacc
aatcaagcaggagcttttgttgcccaaaacaacttccaggcccaacagtttgttcccaat
aagctcattgcacaaaatggcacaagccatcctcagtaccagtttcctcaggcccaggtg
cctcctcagcatccaccccaacctcagcatccaccccaacaacttggccctcaacagcat
cctccaccgcctctggtgccgtaccccatgcctccacagttcgctcagtaa
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