Poecilia reticulata (guppy): 103468401
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Entry
103468401 CDS
T05149
Symbol
ddx5
Name
(RefSeq) putative ATP-dependent RNA helicase DDX5 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103468401 (ddx5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pret03041
]
103468401 (ddx5)
03009 Ribosome biogenesis [BR:
pret03009
]
103468401 (ddx5)
Enzymes [BR:
pret01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103468401 (ddx5)
Spliceosome [BR:
pret03041
]
Complex A
U1 snRNP components
U1 related factors
103468401 (ddx5)
Complex B
103468401 (ddx5)
Ribosome biogenesis [BR:
pret03009
]
Eukaryotic type
Pre-60S particles
Helicases
103468401 (ddx5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
103468401
NCBI-ProteinID:
XP_008413683
UniProt:
A0A3P9PM67
LinkDB
All DBs
Position
8:6041164..6046703
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AA seq
632 aa
AA seq
DB search
MPGYSDRDRGRDRDRGYGGGPPRFGGSRSGGGGGGKFGNPGERLRKKHWNLDELPKFEKN
FYQQHPDVAHRSLQEAEQYRRSKTITVKGRDCPNPITQFHEASFPSYVMEVINKMNWTEP
TPIQAQGWPLALSGMDMVGIAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTR
ELAQQVQQVAAEYGRASRLKSTCIYGGAPKGPQLRDLERGVEICIATPGRLIDFLEAGKT
NLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEY
VQINIGALQLSANHNILQIVDVCNDGEKENKLIRLLEEIMSEKENKTIIFVETKRRCDDL
TRRMRRDGWPAMGIHGDKSQQERDWVLNEFKFGKAPILIATDVASRGLDVEDVKFVINYD
YPNNSEDYIHRIGRTARSQKTGTAYTFFTPNNMRQAGDLVSVLREANQAINPKLLQMAEE
RGGRSRGGRGGDYDRRDRYSSGRRDYGGGRDRDNNRGYNNGPNKSYGAGSQNGGYGGSNG
YGGGNYNTNGQSNFGTNQAGAFVAQNNFQAQQFVPNKLIAQNGTSHPQYQFPQAQVPPQH
PPQPQHPPQQLGPQQHPPPPLVPYPMPPQFAQ
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgcctggatattcagacagagaccgcggcagagatagagacagaggctatggcggtggt
ccaccccgattcggtggcagccggagtggaggtggaggtggaggaaagtttggcaatcca
ggtgagcgattgaggaagaaacactggaacctggatgagctcccaaagtttgagaaaaac
ttctatcagcagcatcccgatgtcgcccatagatcactgcaagaagctgagcaatacaga
aggtccaaaactataacagtgaaggggagggactgcccaaatcccataactcagttccat
gaagcaagctttccctcttatgtgatggaggtcatcaataaaatgaactggactgaacca
acacctatccaggcccagggttggcctttggctctcagtggcatggacatggttggcatt
gcacagactggctctggcaagacactttcttatcttctgcctgcaatcgtgcacattaat
caccagcctttcttggaacgtggggacggtccaatttgtctggtgttggcccccactcgt
gagctggcccagcaggtgcaacaggtggctgctgaatatggcagagcttctcgtctgaag
tccacctgcatctacggaggcgcaccaaaagggcctcagctccgtgatttggaaagaggt
gtggagatttgcatcgccactccaggcaggctcattgacttccttgaagcaggaaaaacg
aaccttcgcagatgcacttatctggtgctggatgaggcagacagaatgctggacatgggg
tttgagccacagatcaggaagattgttgaccaaatcaggcctgacaggcagactctgatg
tggagtgctacttggcctaaagaggttcgccaactggcagaagactttctgaaagagtat
gttcagatcaacattggtgcactgcagcttagtgctaaccataacatcctgcagattgtg
gatgtctgcaatgatggagaaaaagagaataagctaatccgtctgcttgaggaaatcatg
agtgagaaggagaacaagaccatcatttttgttgagacaaaaaggcggtgtgatgacctc
actcgacgaatgagaagagatgggtggccagctatgggaatccatggtgacaaaagccag
caggaaagggactgggttcttaatgagttcaaatttggcaaagcccccatactgattgcc
actgatgttgcgtccagaggcctagatgtggaagacgtgaaatttgtcatcaactatgac
taccctaacaactctgaggactatatccaccgcattggcagaacggctcgtagccaaaag
acgggcacggcctataccttcttcactcccaacaacatgaggcaggccggggacctcgtc
tctgtgctgcgcgaggccaaccaggcaattaacccaaagctcctccagatggcagaagaa
agaggaggtcgttcaaggggcggcagaggtggtgactacgaccgtcgagataggtattcc
tctggaaggcgtgattatggcggcggtagggatagagataataatagaggatataacaac
ggaccaaacaagagctatggcgcaggttctcagaatggaggctatggaggcagcaatggt
tacggtggagggaactacaacaccaatggacagtcaaactttggcaccaatcaagcagga
gcttttgttgcccaaaacaacttccaggcccaacagtttgttcccaataagctcattgca
caaaatggcacaagccatcctcagtaccagtttcctcaggcccaggtgcctcctcagcat
ccaccccaacctcagcatccaccccaacaacttggccctcaacagcatcctccaccgcct
ctggtgccgtaccccatgcctccacagttcgctcagtaa
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