Poecilia reticulata (guppy): 103468478
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Entry
103468478 CDS
T05149
Symbol
smurf1
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret04120
Ubiquitin mediated proteolysis
pret04137
Mitophagy - animal
pret04144
Endocytosis
pret04340
Hedgehog signaling pathway
pret04350
TGF-beta signaling pathway
pret04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103468478 (smurf1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
103468478 (smurf1)
04350 TGF-beta signaling pathway
103468478 (smurf1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
103468478 (smurf1)
04137 Mitophagy - animal
103468478 (smurf1)
09144 Cellular community - eukaryotes
04520 Adherens junction
103468478 (smurf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pret04131
]
103468478 (smurf1)
04121 Ubiquitin system [BR:
pret04121
]
103468478 (smurf1)
03029 Mitochondrial biogenesis [BR:
pret03029
]
103468478 (smurf1)
Enzymes [BR:
pret01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
103468478 (smurf1)
Membrane trafficking [BR:
pret04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
103468478 (smurf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
103468478 (smurf1)
Ubiquitin system [BR:
pret04121
]
Ubiquitin ligases (E3)
HECT type E3
103468478 (smurf1)
Mitochondrial biogenesis [BR:
pret03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
103468478 (smurf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
103468478
NCBI-ProteinID:
XP_008413809
LinkDB
All DBs
Position
LG8:complement(8885706..8904086)
Genome browser
AA seq
730 aa
AA seq
DB search
MSNPGSRRNGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVKSTLDP
KWNQHYDLYIGKTDSITISIWNHKKIHKRQGAGFLGCIRLLSNAISRLKDTGYQRLDLCK
LNPSDSDAVRGQIVVSLQTRDRIGSGGPVVDCRGLLENDGPVFEGCFSEEPLPYSDPTGA
AGGGNCRLDSPGQESRLQTLRIRGSDSRGHGHTPQNRPHGHQPPDLPEGYEQRTTVQGQV
YFLHTQTGVSTWHDPRIPRRDLASVSCEELGPLPVGWEVRSTVSGRIYFVDHNNRTTQFT
DPRLHNIISHQSQVKETSQAPPMDVGVDEGGGGGIGGGGDGDVAVRYERDLVHKLKLLRH
ELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVAREW
LYLLCHEMLNPYYGLFQYSTDNIYTLQINPDSSINPDHLSYFHFVGRVMGLAVFHSHYIN
GSFTLPFYKQLLGKPIQLNDLETTDPELHKSLVWILENDITSVLDHTFCVEHNAFGKFSQ
HELKPNGRNIPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFSELIPQHLLKPFDHKE
LELIIGGLGKIDLADWKANTRLKHCTGESNVVRWFWQAVEAFSEERRGRLLQFVTGSTRV
PLQGFKALQGSTGSAGPRLFTIHLIDANTENLPKAHTCFNRIDIPPYESYEKLYEKLLTA
VEETCGFAVE
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatcctgggagtcggagaaacgggtccagcatcaaaatccgactgacagtatta
tgtgccaagaacctcgcaaagaaagacttctttcgcctaccggatccgttcgctaaggtg
gtggtagacggatcgggtcaatgccactccacagacacagttaagagcacactggacccc
aagtggaatcagcactatgatctctacatcgggaagaccgactccatcaccatcagcata
tggaaccacaagaagatccacaagcggcagggggcggggtttctgggctgcatacgactg
ctttccaacgccatcagcaggctaaaagacacaggataccagcgtctagatctatgcaag
ctgaacccctctgacagtgacgcagtgagggggcagatcgtagtgagcttacagacgcgg
gaccgcattggcagtggtggtcctgtagtggactgcagaggactgttggaaaacgatgga
cccgttttcgagggctgcttcagcgaagagccgctgccctactccgaccccaccggcgcg
gcgggcggcgggaactgccggctggactccccaggtcaggagagccgcctgcagactctg
cgaatcagagggtcggactccaggggtcacggccacacccctcagaaccgacctcacggg
catcagccacccgatctgccggagggatacgagcaacgaacaactgtgcaaggccaggtg
tacttcctccacacacagacaggcgtcagcacctggcacgaccctcggataccacgtagg
gatctggccagcgtgagctgcgaggagctcggcccactgccggtgggctgggaggtccga
agcaccgtgtccggccgcatctactttgtggaccacaacaaccggaccacgcagttcact
gacccccgtctgcacaacatcatcagccaccaatcccaagtgaaggagacgtcccaggcc
ccgccgatggacgtcggggtggacgaggggggaggcggagggatcggcggcggaggagac
ggagacgtggcggtgcgctacgagcgagacctggtgcacaagctgaagctgctgcgccat
gagctgtcgctgcagcaacctcaagcgggacactgtcgcatcgaggtgtcccgagaggag
atctttgaggagtcgtatcgacagataatgaagatgaggccgaaggacctgaagaaacgg
ctgatggtgaagttcagaggagaggagggcctcgattacggaggagtggccagggagtgg
ctgtatctgctgtgtcatgagatgttgaatccatactatggcctcttccagtactccact
gacaatatctacacactacagatcaaccccgactcctccatcaaccctgaccacttgtcc
tattttcactttgtgggccgcgtgatgggcctggcggtcttccacagtcactacatcaat
ggcagcttcacgctgcccttctacaagcaactgttaggcaaacccatccagctcaatgac
ctggagaccacggacccggagttgcacaagagcctcgtctggatattggagaacgacatc
acttcagtcctggatcacacgttctgcgtggagcacaacgcctttgggaagttctcccaa
cacgaactcaaacctaacggcagaaatattcccgtcaccgaggagaacaagaaggaatac
gttagactttatgtaaactggaggtttatgcgtgggattgaagcccagttcctggctctc
cagaaaggattcagcgagctgatcccgcagcacctcctcaaaccatttgaccacaaagag
ctagagttaataattggcggactggggaagatagacctggccgactggaaggccaacacc
cggctgaagcactgcaccggggagagcaacgtggtgcggtggttctggcaggccgtggag
gccttcagcgaggagaggagagggcgcctcctgcagttcgtcacgggctccactcgggtt
cccctgcaggggttcaaagcgctgcagggctctacaggttctgcaggaccgaggctcttc
accatccacttgatagacgccaacacagagaacctaccgaaagctcacacgtgtttcaac
aggatagacatccctccctatgagtcctacgagaaactttacgagaagctgctgacggcc
gtggaggagacgtgcggcttcgccgtggagtga
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