Poecilia reticulata (guppy): 103468604
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Entry
103468604 CDS
T05149
Symbol
ciita
Name
(RefSeq) MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pret01001
]
103468604 (ciita)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pret04054
]
103468604 (ciita)
Enzymes [BR:
pret01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
103468604 (ciita)
Protein kinases [BR:
pret01001
]
Serine/threonine kinases: Other
TAF1 family
103468604 (ciita)
Pattern recognition receptors [BR:
pret04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
103468604 (ciita)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
LRR_14
nSTAND3
RsgA_GTPase
AAA_22
Motif
Other DBs
NCBI-GeneID:
103468604
NCBI-ProteinID:
XP_008413987
LinkDB
All DBs
Position
LG8:9643381..9667415
Genome browser
AA seq
1525 aa
AA seq
DB search
MAQFXEVLNQVRSVLTVALPGEVHALLEGLVEEGIISEAYRNSLNLHWLNDGIVPKFTSK
XGCVELDEDLNSPGSVAQLDLNQEPMSQVRTGGSKSLAGDHNVEQTESVSLIEEPNNTRF
TPEKNKWLQHEILQRNQEEMQELLEEVLMDVSYFXQXPLSSLPVYDCTLRSSDEKAELLN
GXSREPPSDNESINMGNEESEEVWLQQVEDSARRIAVPLWQNWDRGRGMLQTLLPCGPSG
CSISDRMMLEGEAQSVVLDMEEEMELAAACSSLDTCVGDFECEELSFACDTDAGRSEREG
LHFSTLSGVAVFNADDFRILGATRKASPVEACKATEAGYITQMREGQFDVLCPVGKTADQ
VDDLFCFTADAPYQQCGAQSGLSEATFRDLLHSDVPVDSRTVLQDASHSLAEGFTDYLED
AEMYNQDGEFQEKTDLHGDAKMQENDQDSAGLXDLGYIMDLLCDDEYLASQLDLLFSNDL
GPDCFDDITQNSDTPVALEVSDTANHNEQREQRKPSGKIKPKRKRQKDALSTQCTNGDSR
VKRHKTTEPPKTQEETAEPPAIHDAEAVSVPAESVGCLPTTPPGNLLVFPPQSANSIPIQ
FITIPDPSAYKVVQLSSSPPPLIRLPLPNTAATPTYIFVPNPSPTRKRQVPPLSPERDDE
KLCNSRNCDNENRPTIFDSLNGKRYNVLFGNAGMGKTTVIKKLCLDWSKDCIPQFDFVFL
LDGKQLALTEPVHSLQTLLLSQSSFAPRCADPDGVYSQILADPKRVLIVFDGFDELRHYE
VLLQTQKKELVASLQKDSKGQTFTVKQLFSSILQRVLLPGCTLLLATRPRGXASQLLRRA
DSFLEVCGFTPANVETYVSQYFSDPGLRESALDFLKSSSYLKLLCWNPALCHLVCAALEQ
CKSEAALPRTLTALCHKVLCLKMEKDRGSTESLPETDISNNSQWMRVQKNNRTRPRACAA
SGIQRARRTKGQKKLDEENVCVDTIRSELLSQLCSIAWEGVKSNSSVVPKGRTVSTKLRA
FSLRTGLLLSQSLMRRTPSKREDTEGGGQVNNGIEEVEKEENREKGGNPQMSXECEDGIL
LWANPFLQSYMAAVHLSLSRTVTDHSFLQTLPFQMGAKGRRKPQREEMELTQRIAAGLLF
HNRTELRSLHSHSETVFRDMVASKQALVMKHLEGLCFGDLSSAQILEVCNYVYEASFTQQ
VSGTDTSAKMLTHLASNLPELLTFRGVPLNPPDVFTVQNALGAGGAQGRSFCLDLEDSGI
QICGLRTLVALSNINTYRACIADVVTLWEELEKRSDEGLLQGAVSKFKIHPLKATQVCHI
EHLERLVSIHTSKRLSDSSDQSNSLLSEGVPAVKELHKLEFELGPENSPLALPKLWDLLP
GLHNLQHLDVENSKIGDKGAEKLANALVSLRSLEVLNLSENCIGDQGVKKLALSLKDLPK
LHCLSLYSNVISDEGAESLAAVLPHMASLTDLDIKYNKMTDIGAQSLGASLRKCSKVKTL
RMWNQCIPYGVFERLKQQDSRILWQ
NT seq
4578 nt
NT seq
+upstream
nt +downstream
nt
atggctcagttcgycgaggtcctgaaccaggtgaggtcggtccttaccgtggcgctgccc
ggcgaggttcacgctctgctggagggtctggtggaagaggggatcatctcggaggcatac
aggaacagtttgaatctgcactggctcaatgatgggattgtgcctaaattcacaagcaaa
cmaggatgcgtcgagctggatgaggacttaaactctccaggatccgtggctcagttggac
ctcaaccaagaaccgatgagccaagtragaacaggcggatcgaaatctctcgctggtgac
cacaatgtggaacaaacggaatcggtctcattaatagaggaaccaaacaacacaagattt
accccggagaagaacaagtggctccaacatgaaattctgcagagaaatcaggaggaaatg
caggagttattggaagaagttctaatggacgtgtcctacttyarccaakwccctctttcc
tcactgccagtgtatgactgcactctcagatccagtgatgaaaaagcagaactgctgaac
ggtscaagcagagagcctcctagtgataatgaaagcataaacatggggaatgaggaaagt
gaggaggtgtggttacagcaggtagaggactcagccaggaggatagctgttcctctgtgg
cagaactgggacagagggagagggatgttgcagaccctcctgccctgtgggccaagcggc
tgctcaataagcgacaggatgatgctggagggtgaagcccagagtgtcgttttggacatg
gaggaggaaatggagcttgcagccgcttgcagttcacttgacacctgcgttggcgacttt
gagtgtgaagagctgagcttcgcgtgtgacacagatgcaggcaggtcagaacgagaaggg
cttcacttctctaccctcagcggagttgctgtgttcaacgcggacgacttcaggatcctc
ggagcgacaagaaaagcctcacctgttgaagcctgcaaagcaacagaggcgggatacatc
acccaaatgcgggagggccaattcgatgttctgtgtccagtcggcaagacggcagaccaa
gtggatgacctgttctgtttcacagcagacgcaccatatcaacaatgtggagctcaatca
ggactgtctgaagccactttcagggacctgctccattcagatgtgcctgtagacagcaga
actgttctgcaagatgcctctcatagtctcgcagaaggatttacagattacctagaagat
gcagaaatgtataaccaagatggagaattccaagaaaagacggatttacatggtgatgcc
aagatgcaagaaaacgaccaggattccgcgggcctgttkgatttgggttatataatggac
cttttgtgcgatgatgaatatttagcttctcagctggatctgctcttcagtaatgatctg
gggcctgactgctttgatgatatcacccaaaacagtgacactcctgtggcactggaggtc
tctgatactgctaaccacaacgagcagagagagcagcggaagccatcgggcaaaataaaa
cccaagagaaaaagacagaaagatgccctttccacacagtgcaccaatggagactccaga
gtgaaaaggcataaaacaacagaaccaccaaaaacccaggaagaaactgctgagccacct
gccattcatgatgccgaagcagtgtcagttccagcagagtctgtgggatgccttcccacc
actcctccgggcaacctgctcgtgttcccgcctcagtcagctaattccattcccattcag
ttcatcacaatcccagacccatctgcttataaggtggtccagctatcctcctcccctcct
ccgcttattaggctcccactcccraacacggctgctacgccaacgtacatcttcgttcct
aatccctctccgacccgcaaacgccaggttccacccctctctccagagagggacgacgaa
aagttgtgcaactcgcgcaattgcgacaatgagaaccgacccacgatctttgacagcctg
aatgggaaacgctacaacgtgctgtttggcaacgctggcatggggaaaacaaccgtgatc
aagaagctgtgtctcgactggtccaaagactgcatccctcagtttgactttgtcttccta
ttagacggcaaacagctcgctttaacggagcccgtccacagcctccagacgctgctgctc
agtcagtcctccttcgctccacgctgcgcggaccctgacggggtttactcgcagatcctc
gcagatcctaaacgggtrcttatcgttttcgatgggtttgacgagctgcggcactacgaa
gtcctgctccagactcagaagaaggagttggtagcctcgctgcaaaaagacagcaaaggc
cagacctttacggtgaagcagctgttytccagcatccttcagagggtcctgcttccaggc
tgyacgctcctcctygccacccgcccgagaggcayrgccagccagttgctccgccgcgct
gacagctttctggaggtctgcggcttcactccagcgaacgtggagacatacgtctcccaa
tacttctccgatcctggacttagggaatctgctttggacttcctaaaaagcagcagctac
ctgaaactcctctgctggaacccggctctctgccacttggtgtgcgcagctttggaacag
tgcaaaagtgaggctgccttaccaagaactctaactgcactctgtcacaaggtgctctgc
ttgaaaatggaaaaagacagaggaagcacagagtcacttcctgagacagacatttctaac
aattctcagtggatgagagtacagaaaaacaatcgcacaaggcccagagcgtgtgctgct
tctggtatccaaagagcaaggaggacgaagggacagaagaaactggatgaggagaacgtg
tgcgtggacaccatcagatcagagttgctgtcccagctttgctctatagcctgggaggga
gtgaaatccaactcatctgttgttcccaaaggacgaactgtctccaccaaactcagagcy
ttcagcttgaggacgggcctgctactttctcagtccctcatgagaaggacgccttccaaa
agagaggatacggagggaggaggacaagttaacaatgggatagaagaagtagagaaggaa
gagaatagagaaaagggaggaaacccacaaatgtctsatgaatgtgaagatgggatcctg
ttgtgggctaatcctttccttcagagttacatggctgctgtccatttgtctttgtcaagg
actgtgacagaccactcctttctccagaccctgcctttccagatgggtgccaaaggccga
cggaaaccacagagagaggagatggagctgacgcagcggatcgccgcaggcctcctgttc
cacaacaggacagagctacggagtcttcattcacactcggaaacagtcttcagggacatg
gttgccagtaagcaagctttggtgatgaaacacctggaaggtctgtgttttggggatttg
agttcagctcagatactggaggtgtgcaactacgtctacgaagcaagtttcacgcagcaa
gtgagcgggacggacaccagtgccaaaatgctgacccatctggcatcaaatctccctgaa
ctcctaacatttcggggcgttcccctcaacccgccagatgtgttcacagtgcaaaacgct
ctcggggcgggcggagctcagggcaggagtttctgtttggatctggaagactctgggata
cagatctgtggacttagaacgttagtggccctcagcaacatcaacacatacagggcctgc
atagcagacgtcgtcaccctgtgggaggagctggagaagaggagcgacgagggtctcctg
caaggagcggtgtccaagttcaagatccatcctctgaaagccactcaggtctgtcacata
gagcacctggaaaggctcgtcagcatacacaccagcaagaggctctcggacagctccgac
caatcaaattccctcctgtcagaaggggtgccagcagtcaaagagctgcacaagctggag
tttgagcttggcccagaaaacagtcccttggctcttcccaaactgtgggaccttctcccc
ggactccataacctgcagcacttggacgtggaaaacagtaagatcggagacaaaggagca
gagaaactggcaaatgcgttagtctctcttcgctcactggaagtactgaatttgtccgag
aactgcataggcgaccagggtgtgaagaagctagccctctccttgaaggacctgcccaag
ctgcactgtctaagtctgtacagtaacgtgatttccgacgaaggggcagagagtttagca
gctgtgctcccacacatggcttcgcttacagacctcgacattaaatataacaagatgacg
gatattggagcacaaagcttgggagccagtttgagaaagtgctctaaagttaagactttg
aggatgtggaaccagtgcataccatatggagtttttgagagacttaagcagcaggacagc
cgcatcctctggcaataa
DBGET
integrated database retrieval system
