Poecilia reticulata (guppy): 103468870
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Entry
103468870 CDS
T05149
Symbol
rnps1
Name
(RefSeq) RNA-binding protein with serine-rich domain 1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03013
Nucleocytoplasmic transport
pret03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103468870 (rnps1)
03015 mRNA surveillance pathway
103468870 (rnps1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pret03019
]
103468870 (rnps1)
Messenger RNA biogenesis [BR:
pret03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
103468870 (rnps1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
103468870
NCBI-ProteinID:
XP_008414470
UniProt:
A0A3P9MZ83
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Position
LG8:11697901..11701452
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AA seq
280 aa
AA seq
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MAPSPTKRKEDEKTKDRGKEKTGTKDGDKERGREKVRKRRSASSGSSSSSRSSSSSSSSS
GSSSGSSSGSSSSGSSRTGSSSSRSSSSSSSSGSPSPSRRRHDNRRRSRSPSKTQKRGDD
KDRRKRSPTPKPTKVHLGRLTRNVTKDHIQEIFSTYGKIKMIDMPADRLHPHLPKGYAYV
EFETAEEAAKALKHMDGGQIDGQEISAAAVLTQRVRLPPRRLSPPPRRMPPPPPMWRRSP
PRMRRRSRSPRRRSPVRRRSRSRSPGRRRHRSRSSSNSSR
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggctccatcacccacaaagcggaaggaggatgagaaaaccaaagatagaggtaaagag
aagactggtaccaaggatggagacaaggagagggggagggagaaagtgaggaagcgccgt
agtgcttcctctggtagcagcagcagcagcagatcgagctcatcgtccagcagcagctcg
ggttccagctcaggttcctcaagtggctccagctcttctggctccagccgcaccggatcc
tcaagctctcgttcatcttcctcctccagctcctcaggctccccaagccccagtcgcaga
cgccatgacaaccgtcgccgctcccgctcaccctctaaaacacagaagaggggagatgat
aaagaccgaaggaagcgaagccccaccccaaaaccaaccaaggttcacttaggaaggctg
accaggaatgtgaccaaggatcacatccaggaaatcttttctacttaygggaaaataaag
atgatagacatgcctgcggataggctccacccacacctgcccaaaggctacgcctatgtg
gagtttgagactgccgaagaggctgcgaaggccctcaaacatatggacggaggtcagatt
gacggacaggaaatcagtgcagctgctgtgctgactcagcgggttcgtctcccacctcgc
agactgtctcctcctcctcggcgaatgcccccaccaccaccaatgtggcgtcgcagcccc
ccacgcatgaggagaaggtctcgctccccgagaaggcggtcccctgtacgccgccgctct
cgctccagatcccccggtcgcaggcgccaccgctctcgctccagctccaactcctccaga
taa
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