Poecilia reticulata (guppy): 103468929
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Entry
103468929 CDS
T05149
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103468929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pret03019
]
103468929
Messenger RNA biogenesis [BR:
pret03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
103468929
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
103468929
NCBI-ProteinID:
XP_008414547
LinkDB
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Position
LG1:22534878..22544345
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AA seq
549 aa
AA seq
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MSGEEADKTATTDASAGDEEEEWLYGDESESKEEDEEPKLDAAASAPAETSTDDAAAVVD
VHATGNGVVSESQGEAAGEDVESDSDSDDDDDDVRVTIGDIKTGAPQYTTYGTPPVNLNI
KTTGSRPYGQVTTKVKGVDLDAPGSINGVPVLEVDMESFEEKPWRKPGADLSDYFNYGFN
EDTWKAYCEKQKRLRMGLEVSTIGSVTSKISVQQGRTGNEKDVSSLVVHTSKTDFTSPVS
LYKSAVSQITRKTSGTIDVIGGQTATISRVEGRRRHNLEGNNIQVISEHSTSEAEPAAAK
IPTFFPPGPLPPNIPPPPFLPPPPNVSTAPPLIPPPRLPITVPPPGFHPPTSGPPPSLIP
PMDSHPGGYDGRSVPPYPFPQGAYPPPLTGGVPPPWPPMVDNSKPWDYYSRREDKRDKER
DRPRERTHEREREREHSPSTMSYTRSEGQIQQCDEERYRYREYQERGYGERHRDRASREK
EERHRERRHREKEEGRRKSSHSSSSRRRHDSEEGDSHRRHKHKKSKRSKEGKEASEDMGA
DQENQEAME
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgtccggggaggaggcggacaaaacagctaccactgacgccagcgccggtgacgaagag
gaggaatggctttatggagatgagtcagaaagcaaagaggaagatgaagaacccaagcta
gatgctgctgccagtgcacctgctgagacttcaacagacgatgctgctgctgttgttgat
gtacacgctacgggcaacggagtggtctccgagtcccaaggtgaagctgcaggcgaggat
gtggagagcgacagcgacagcgatgatgacgacgacgatgtccgagtcaccattggtgac
atcaaaactggagcaccgcaatacacgacatatggcaccccccctgttaacctcaacata
aagacaacaggatccagaccttatggacaagtaaccacaaaggtgaagggcgtggatctg
gatgcaccaggaagcattaatggcgttcctgtgctggaggtggacatggagagctttgaa
gagaaaccctggaggaagccaggagccgatctgtcagactatttcaactatggttttaat
gaggacacctggaaggcttactgtgagaaacagaagaggctgcgaatgggcctggaggtc
tctacaattggctcagtgaccagcaagatctctgttcagcagggcagaacaggaaatgaa
aaggatgtatccagtttggttgttcacacctccaagacagactttacgtctcctgtcagc
ctgtacaagtctgctgtcagtcagatcaccaggaagacaagtggtactattgatgtgatt
ggtggacagacggccacgatcagcagggttgagggacgacgcagacacaatctagagggc
aacaacatccaggtgatatctgaacactcaacatcagaagctgaaccagccgcagccaag
attcccaccttcttcccccctggaccacttcctccgaacatacccccgcctcctttcctc
cctcctccaccaaacgtcagcactgcacctcctcttatacctccacccagattgcccatc
acagttcctcctcctggttttcaccctccaacaagcggccctccaccttctctaattccc
ccaatggatagccatcctggaggctacgatggtcgctctgtcccaccgtacccgtttcct
caaggtgcttaccctccacccttaactggaggcgtgcctcctccgtggccccccatggtg
gacaacagcaaaccttgggactattattcccgtcgggaagacaagagagacaaggagcgg
gaccggcccagagagcgaacgcatgagcgcgagcgagagagggagcacagcccctcaacc
atgagctacaccaggtcagaaggacagatacaacaatgtgatgaggagcggtatcgctac
cgtgagtaccaagaacgtggttacggggagcgccatcgtgaccgggcaagccgagaaaaa
gaggagagacacagagagaggcggcaccgagagaaagaggagggacgtcgcaagtcctct
cacagcagcagcagtcgacggagacacgacagcgaggagggcgacagccacaggagacac
aaacacaagaagagtaagaggagcaaggagggcaaagaggctagtgaggatatgggtgca
gatcaggagaaccaggaggctatggagtag
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