KEGG   Poecilia reticulata (guppy): 103469127
Entry
103469127         CDS       T05149                                 
Name
(RefSeq) THO complex subunit 4-like isoform X1
  KO
K12881  THO complex subunit 4
Organism
pret  Poecilia reticulata (guppy)
Pathway
pret03013  Nucleocytoplasmic transport
pret03015  mRNA surveillance pathway
pret03040  Spliceosome
pret05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:pret00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103469127
  09122 Translation
   03013 Nucleocytoplasmic transport
    103469127
   03015 mRNA surveillance pathway
    103469127
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    103469127
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pret03019]
    103469127
   03041 Spliceosome [BR:pret03041]
    103469127
Messenger RNA biogenesis [BR:pret03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     103469127
    TREX complex
     103469127
Spliceosome [BR:pret03041]
 Complex C
  Other components
   EJC/TREX
    103469127
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    103469127
SSDB
Motif
Pfam: RRM_1 FoP_duplication
Other DBs
NCBI-GeneID: 103469127
NCBI-ProteinID: XP_008414864
UniProt: A0A3P9PNY8
LinkDB
Position
LG8:complement(21060042..21064305)
AA seq 270 aa
MADKMDMSLDEIIKQNRQQRGGGRGGRGRGRGGRVGLGGGRGGGPGRLGGGGGGGFGGRG
GGSGPMRSRQNLNRARGRPTPYSRPKQLPDKWQHDMFDNGFGGFNGSAGGGGGAGVETGG
KLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERRADALKAMKQY
NGIPLDGRPMNIQLVTSQIDTQRRPMQGLVVVGGMNRNRTFGMQRGRGGRGSGFFRGRGR
GGGRGGGSKPLSAEELDAQLDAYNARMDTS
NT seq 813 nt   +upstreamnt  +downstreamnt
atggccgataaaatggatatgtctctagatgagattatcaagcagaacaggcagcagaga
ggtggaggccggggaggaagaggccgcggccgaggtggccgtgtaggcttaggcggcggc
cgaggaggaggccccgggcgacttggaggcggcggcggtggaggatttggaggccgaggc
ggcggatccggccccatgaggagtcgacagaacctgaaccgcgctagaggcaggccgacg
ccttacagcaggcctaaacagctccccgacaagtggcagcacgacatgttcgacaacggc
ttcggaggctttaatggtagtgccggcggtggcggaggagctggtgtggaaactggaggg
aagctcctagtctccaatctggacttcggtgtttcagatgcagacattcaggaacttttt
gctgaatttgggactctgaagaaggctgctgttcattacgaccgctcaggaagaagcctg
ggaacagctgatgtccattttgagaggagagcagatgcactgaaggccatgaagcaatat
aacggcatcccacttgatgggcggccaatgaacattcaactcgtcacatcacagattgac
acacagaggcggcctatgcaggggttggtcgtagttgggggcatgaacagaaatcgcacc
tttggcatgcagagaggtcgaggcggccgtggttcaggttttttcagagggagaggacgg
ggtggtggccgaggtggcggaagcaaaccgctttcagcagaggagcttgatgcacaatta
gacgcctacaacgccaggatggacaccagttaa

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