Poecilia reticulata (guppy): 103469324
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Entry
103469324 CDS
T05149
Name
(RefSeq) transducin beta-like protein 3
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
103469324
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pret03009
]
103469324
Ribosome biogenesis [BR:
pret03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
103469324
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
Utp13
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_EML
Beta-prop_DCAF4
Beta-prop_CAF1B_HIR1
Beta-prop_Vps41
Beta-prop_IFT122_1st
SPT6_acidic
INTS7_C_plants
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
103469324
NCBI-ProteinID:
XP_017161626
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Position
LG8:complement(23248335..23261980)
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AA seq
472 aa
AA seq
DB search
MANTPLQFKTNYAVSSKIEPFYKGGKVQISKDEKYIFCTCGSRVNVLEISTGKIVHCVEH
DDQEDITSFAVSCDDELLVTASRALLLKQWDWRQGTCTRSWKAIHTIPVASMTFDPSSTL
LATVYQLPSLTTQQQFVGYNDEVLDVKFLGKDDTHIVVATNSCQLKVFQLLTNSCQILYG
HTDTVLTLDVFKKGSLFASCAKDRSVRVWQLDSDNGQVRCVAQGSSHTNAVGSIGCSRSP
XSGSDGLVKLWTIKTNECVKTLDAHQDKVWGLHGSRKDDXMVTGSADSNITVWLDVTKVE
LAEEQAKQEDQIMKQQELSNLLHEKKYLKALGLAISLDQPHTVLTVIKGSQVDLNLCFQP
SFCFPPTQSKHIKCLCRICTALLLFSVCHECDGDREQEEESGFVVKDEEEAEEISASKKA
SANDAREKKGETNGRRQSESEESSEGEEEDDHVVQVMQNLPISSAPRLQALS
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacacacccctgcagttcaaaacgaattacgctgtttccagcaaaattgagccg
ttttacaaaggagggaaagtgcagatcagcaaagatgagaagtacattttctgcacatgt
ggatcccgtgtcaatgttttggagatcagcactggcaagatcgtccactgtgtggaacat
gatgatcaagaggatatcacatcatttgcagtgagctgtgatgatgagctgctggtgaca
gccagcagagctttgctgctgaagcagtgggactggaggcagggtacctgcactcgctcc
tggaaggccattcataccatccctgtggccagcatgacctttgaccccagctccacccta
cttgccacagtctaccagctgcccagtctcaccacacagcagcaatttgtgggttacaac
gacgaggtgctggacgtgaagttcctgggtaaagacgacactcacatcgtggtggccact
aacagctgtcagctgaaggtcttccagctgctcaccaacagctgccagattctctacggg
cacacagatactgtcctcactctggatgtgttcaaaaaaggctctctatttgcaagctgt
gcaaaggaccggtcagtgcgtgtctggcagctggacagcgacaacggtcaggttcgatgt
gtagctcagggatccagccacactaatgctgtcggctccataggctgctccaggtctccc
stcagcggctcagacggtttagtgaagctgtggaccataaagaccaatgagtgcgtgaag
acattggacgcccaccaggacaaagtgtggggtctccacggcagccgtaaggatgacarg
atggtcacaggctcagcagactcaaacatcacagtgtggctggatgtgactaaagtggag
ctggcagaggaacaagccaaacaagaggaccagataatgaagcagcaggagttgtccaac
ctgttgcacgagaagaaatacctgaaggccctgggtctcgccatctcgctggaccagcct
cacacggtgctcactgtcatcaaaggtagtcaggttgaccttaacttgtgttttcaacct
tcattctgttttcctcctacacaaagtaaacacataaaatgtctttgtcgtatttgcact
gcgctgcttttattttccgtctgtcacgaatgcgacggggatagagagcaagaagaggag
tctggttttgtggtgaaagatgaagaggaggccgaagaaatcagcgcctcgaagaaagcc
tccgctaacgacgcacgggagaaaaagggggaaaccaacgggcgccgccagtcagagagc
gaggagagctcagagggggaagaggaggaygatcatgtagtgcaagtgatgcaaaatctc
ccgatttcatccgctccccgactccaggctttaagctaa
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