Poecilia reticulata (guppy): 103469618
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Entry
103469618 CDS
T05149
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B-like isoform X3
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret04010
MAPK signaling pathway
pret04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
103469618
04020 Calcium signaling pathway
103469618
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pret04040
]
103469618
Ion channels [BR:
pret04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
103469618
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
103469618
NCBI-ProteinID:
XP_008415624
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All DBs
Position
LG9:3230857..3276889
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AA seq
1921 aa
AA seq
DB search
MLAEEDKNAEEKSVDGAWYKRKHNPNSVLKRTKKSKNDLINAEEGEDHFTDISSVAPPGS
PFARASVKSKNESSSYLRRKEKRIRFTIRHLVKSQTFYWTVLCLVGLNTLCVAIVHYDQP
EWLTYALYLAEFVFLGLFLAEMTMKMYGLGPQSYFHSSFNCFDFGVIIGSIFEVVWAAIK
PGASFGISVLRALRLLRIFKVTKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLG
MQLFGGQFNFEDETPTTNFDTFPAAILTVFQILTGEDWNAVMYHGIESQGGVHGGMFSSI
YFIILTLFGNYTLLNVFLAIAVDNLANAQELTKDEEEQEEAISKKLALQKAKEVQEVSPM
LAANISITTNEQQRSVKTMSVWEQKASQLRRHNQASCEVLYDPEECVHLPSGLQMRPDMK
THLDRPLVVGHSDGLLVRGHQHHRHKPGTPEEAETAADPPSAPPHSHHRHHRHRVRGPAK
VKEEPNDSGGDSGKDGRQHVHHSHSKNHDYSCRQEGKSGRSCSKDRSRKHHSSMDESAGG
GATREREHRHHHSHRQSRGGNGTVNGGGRGEHRVHRKDGRSSNKDGDREGKRRRHHTHGS
RSQSRAEGEESNEREEPNTNRFGDSDDISQQPGSLETSGQPEDSDNQKNVRRTGQTSIRI
PPVTITTPGEITMIQMNSTDNESMPMNEKNLKDQCHSGPRPILPYSSMFIFGQTNPVRRL
CHYIVTLRYFEMSILVVIAMSSIALAAEDPVWTNAPRNNVLKYLDYAFTGVFTFEMVIKM
VDLGLLLHPGSYFRDLWNILDFIVVSGALVAFAFSSFMGSQQAVTRGTKGKDISTIKSLR
VLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYILFMFIFAVIAVQLFKGKFFYC
TDESKALEKDCKGQFLDYDKETVAAMPREWKKYEFHYDNVLWAFLTLFTVSTGEGWPTVL
KHSVDATFEDQGPSPGYRIEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKALSECS
LEKNERACIDFAINAKPLTRYMPENTQSFQYRMWKFVVSAPFEYSIMIMIALNTVVLMMK
FYGAPDFYEAMLKYLNIVFTTLFSLECILKIIAFGPLNYLKDAWNVFDFVTVLGSITDIL
VTEIKTTDRLLNLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFF
IYAIIGMQVFGNIELNEDTAISHHNNFRTFLQALMLLFRSATGEAWHEIMLSCLSHRPCD
ELSGTSGKDCGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEF
IRVWAEYDPAACGRIKYSDMYQMLLHMPPPLGLGKKCPPRVAYKRLVKMNMPIADDKTVH
FTSTLMGLIRTALEIKLASGMVLQRLMDAELKKEVSTVWPSLSQKTMBLLVTPHKPNELT
VGKVYAALMIFDYLKQNRTRRLQQMANSDAQCKVEALFKPLLPLTHMQGSPSAPQSQQSL
ESFRQVVSSNSINNGGMLPGYDPRNKSVPSTGIERPTEEVYPKPKRTISKGPSVDTSNAV
NQESVELNSVSSTVPVPGPGPGLESQGRAASMPRLNVELQSGRDASSMRRSVTTVAPQRP
QEVNLRDYTLEKPRHERTHHHHHHHHCHHRRDRDKDKRQASLDTPFGGQPPNSAGGPEEP
ASEPAASRERAHKRGRSHERKHHHSSADKQRYYSCDRYCSRERCCPKSATAACSYREEQE
TSKKQGSGLVKGSPDASRSGSSTLSRGRRLLPQVPHTPRPGVGYKTAHPSQVPFVSSQAF
QSPGRLSRGLSEHNTLRHSGSYYFPCPVTRISSEPFLGQGHGETLGSPYSSFQNQLDXFQ
DVAPLSPTPSAEQSPRTTLPRMMGALHPTFGVEPSVPNGYHLRLGGSTSPGTGYRALRYR
R
NT seq
5766 nt
NT seq
+upstream
nt +downstream
nt
atgctggctgaggaagacaagaacgctgaggagaagtctgtggatggagcgtggtacaaa
aggaaacataaccccaactctgtgctgaaaagaacgaagaagagtaagaatgacctcatt
aatgcagaagaaggggaggaccatttcactgacatttcatcagttgcccccccagggtca
ccatttgcacgagcgagtgtgaagagcaagaacgagagctcgtcttacctgaggaggaag
gagaagagaattcgcttcaccatccgccacctggtcaaatcccagacgttttactggact
gtattatgtcttgttggcctcaacacactgtgtgtagctatagtacactatgaccagcca
gagtggcttacgtatgcattatacctggccgagtttgtgtttctgggcttgttcctggct
gagatgaccatgaaaatgtacggtcttggaccccagagctacttccactcttcttttaac
tgttttgattttggggtcattattgggagtatttttgaggtggtctgggctgccatcaaa
cctggggcttcatttggtatcagtgtcctgagagcgctgcgattactccggatcttcaaa
gttaccaagtactggaactctttgagaaacctggtggtatccctactcaactctatgaag
tccatcatcagtctgttgttcctgctcttcctcttcatcgtggtctttgctctgctggga
atgcagttgtttggtggacagtttaactttgaggatgaaactccaacaaccaactttgac
acattcccagctgctattctcactgtgtttcagattctaacgggggaggactggaatgct
gtcatgtaccatgggatagaatctcagggtggtgtgcatggaggaatgttctcctccatt
tatttcattattctcactctttttggaaactacacgctgctcaacgtgttcttggccatc
gctgttgataaccttgcaaatgcccaggagcttacaaaggatgaggaggaacaggaggag
gcaatcagcaaaaagttggctcttcagaaggctaaagaggttcaggaagtcagccctatg
ttggctgctaacatttcaatcacaaccaatgagcagcagaggtcagtcaagacgatgtct
gtctgggagcagaaagccagccagctgaggaggcacaatcaggcgagctgcgaggtctta
tatgatcccgaggagtgtgtccacctcccctctggccttcagatgcggcctgacatgaag
acccaccttgaccggcccctggttgttgggcattccgatgggctgctggtgagaggccat
caacatcaccgtcacaagccgggcacgccagaggaagcagagactgccgctgatccaccg
tctgctccgcctcattctcatcaccgtcatcaccgccacagagtcagagggccggctaag
gtgaaagaagagcctaatgacagcggtggtgacagtgggaaagacggaaggcaacacgtc
catcacagccactccaaaaaccatgactacagctgtagacaagaggggaagagcgggagg
tcctgcagcaaagacaggagcagaaagcatcacagttcaatggatgagagcgcaggtggg
ggggccacaagagagagagagcatcggcatcatcattcacatcgacagtccagagggggg
aatgggacagtgaatggtgggggtcgaggcgagcacagggttcaccgtaaagatggccga
tcatctaacaaggatggggacagggagggcaagaggagaaggcatcacacacacgggtcg
aggagtcagtccagggctgaaggagaggagtcaaatgagagagaagagccaaatactaac
aggtttggtgactcagatgacatttcccagcagccaggctctctggaaacgtctggccag
ccagaggactcagacaaccagaagaatgtcagaagaacagggcagacttccatccgcatt
ccccctgtgactatcaccacacctggagagatcactatgatacaaatgaatagtactgac
aatgaatcaatgcctatgaatgagaagaacctgaaggatcaatgtcactctggaccaaga
cccatcttaccttacagctcaatgtttatctttggacagaccaacccggtgaggcggtta
tgtcactacattgtgaccctgcggtattttgagatgtccatcctggttgttatcgcaatg
agcagcattgctctggcagctgaggatccagtctggacaaatgcccctcgcaacaatgtg
ctcaaatatctggactatgcctttactggggttttcactttcgaaatggtgatcaaaatg
gtggatcttggactgcttctccatcctggatcttacttcagagacctgtggaacattctg
gacttcatagtggtcagtggggctctggtggcatttgcattttcgagcttcatgggatcg
cagcaagctgtgaccagggggactaaaggcaaagacatcagcaccatcaagtcactgagg
gtcctcagggttcttaggcctctgaagaccatcaaacgtctgccaaaactcaaggccgtg
tttgactgtgtggtcaactctttgaagaacgtgctgaacatcctcattgtttacatcctc
ttcatgttcatttttgctgttattgcggttcagctcttcaagggaaaattcttctattgc
accgatgagtccaaagccctggagaaagactgcaaaggacaatttcttgactacgacaaa
gaaacagtggcagcaatgccaagagagtggaaaaaatatgaattccattatgacaatgta
ctctgggccttcctaactctcttcacagtctcaaccggggagggctggccaactgttctg
aaacattctgttgatgctaccttcgaagatcaaggtcccagccctggctaccgcatagag
atgtccatcttctatgtggtctactttgtggtctttccatttttctttgtcaacatcttt
gttgctctgatcataatcactttccaagaacagggagacaaggccttgtctgaatgcagt
ttggaaaagaatgagagagcttgcattgactttgccataaatgcgaaacctttgacacgc
tacatgccagagaacacacagtccttccagtacaggatgtggaagtttgtcgtttcagct
ccatttgagtactccattatgattatgattgctctcaacactgtggtactcatgatgaag
ttttatggagctccagacttttatgaggcaatgttgaagtacctgaacatagtgttcacc
actcttttctctctggagtgcattctcaagatcatcgcctttgggcccctgaactactta
aaagacgcctggaatgtatttgactttgtgacagttttggggagcatcactgacatcctg
gtgactgaaatcaaaactacggacagactattgaatttgagcttcctgaggctcttcaga
gcagctcggctcatcaagctgctgaggcagggctacaccatccgcatcctgctctggacc
tttgtccagtctttcaaggctctgccgtatgtgtgcctgcttattgccatgctgttcttc
atttatgccatcattgggatgcaggtgtttgggaacattgagctgaatgaagacacagct
atcagccaccataacaacttccgcacttttctccaggctcttatgctgctgttcaggagt
gcaactggagaagcctggcatgagatcatgctgtcgtgtctgagtcatcgaccctgtgat
gagctctcagggactagtggaaaagactgtggcagtgattttgcctacttctactttgtc
tccttcatcttcctctgctccttcctgatgctgaatctctttgtggctgtcataatggat
aactttgagtacctcaccagagactcctccatcctggggcctcatcatcttgatgaattc
attcgagtttgggccgagtatgacccagctgcttgtggccgtatcaagtactccgatatg
tatcagatgctgctacacatgcccccacccttaggtttgggaaagaaatgtccaccaaga
gtcgcctacaagcgtcttgtgaagatgaacatgcccatcgctgatgacaaaacagttcac
tttacctccactctaatgggcctgattcgcactgcgctggagatcaagttggcctcaggt
atggtcctgcagcgattaatggatgctgagttaaagaaagaagtgtccacagtttggccg
agcctctcacagaagaccatgratttgttggtgacgccacacaaacccaatgagctaacg
gtaggaaaggtttacgcagcactgatgatctttgactacttgaaacagaatcgaacgagg
aggctgcagcagatggccaactctgacgcccagtgcaaggtcgaagctctgtttaagcca
ttgctgcctctgactcacatgcagggctcacccagtgctcctcaatctcagcaaagcctg
gagtcattccgtcaagtggtcagctctaactccatcaacaatggagggatgctgccaggt
tatgaccccagaaataaatcagtaccttccactgggatagagaggcccactgaggaggtc
tatcccaaaccaaagagaaccatatccaaaggcccatcagtggacacatcaaacgctgtc
aatcaggagtcagtagagctgaacagtgtcagcagcacagttccagtcccaggccctggt
ccaggtctggagagccagggcagggctgcttcaatgcctcggctcaacgtggagctccag
tctggtcgtgatgctagctctatgagacgctctgttaccactgtagctccacagcggccc
caggaggttaaccttagggactacaccctagagaaacctcgtcatgaaagaacacatcac
catcaccaccaccatcactgccaccaccgcagagaccgggacaaagacaagagacaagcg
tctttggataccccttttgggggccaacctcccaactcagctggtggaccagaagagcca
gcatctgaacctgctgcctccagagagcgagcccataaacgtgggcgctcccatgaaagg
aaacaccatcactcctcagcagacaagcaacgttattactcctgtgaccgctactgcagc
cgggaacgctgctgtcccaaatctgctactgccgcctgctcgtaccgagaggagcaggaa
accagcaaaaagcagggcagtggtttggttaaaggcagcccagatgcatcaagatccggt
tctagcacactaagccgtggacgccggctgctcccacaggtcccacacaccccacggcct
ggggtgggatataagactgcacacccttctcaagtgccctttgtgtctagtcaggctttt
cagagtcctggccgactaagccgtggcctgtcggaacacaacaccctccgtcatagtggt
tcctactacttcccctgccctgtcactcgtatcagctcggagccctttttgggccagggc
catggtgagaccctgggcagtccttacagcagcttccagaaccagctggatrtcttccag
gatgtggcaccactgtcccctacccctagtgccgaacagtcaccccggaccacactgcct
cgaatgatgggagccctacatccaacttttggtgtagaaccgagtgtgcccaatgggtac
cacttacgtttagggggcagcaccagcccaggcactggatacagggcactgaggtacaga
aggtag
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