Poecilia reticulata (guppy): 103469782
Help
Entry
103469782 CDS
T05149
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103469782
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pret03041
]
103469782
03009 Ribosome biogenesis [BR:
pret03009
]
103469782
Enzymes [BR:
pret01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103469782
Spliceosome [BR:
pret03041
]
Complex A
U1 snRNP components
U1 related factors
103469782
Complex B
103469782
Ribosome biogenesis [BR:
pret03009
]
Eukaryotic type
Pre-60S particles
Helicases
103469782
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
BNIP2
Motif
Other DBs
NCBI-GeneID:
103469782
NCBI-ProteinID:
XP_008415927
UniProt:
A0A3P9Q1F0
LinkDB
All DBs
Position
LG1:25613429..25624141
Genome browser
AA seq
636 aa
AA seq
DB search
MPGFSDRDRGRDRGYGGGPPRFGGGGGGNRGGPPPGKFGNPGERLRKRHWNLDELPKFQK
NFYQEHLDVTHRPLQEVEEYRRSKEVTVKGRDCPKPIVKFHEAAFPSYVMDVIVKQNFTE
PTPIQSQGWPVALSGKDMVGIAQTGSGKTIAYLLPAIVHIQHQPFLEHGDGPICLVLAPT
RELAQQVQQVAAEYGRASRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGK
TNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVRQLAEDFLKD
YVQINIGALQLSANHNILQIVDVCNDLEKEDKLIRLLEEIMSEKENKTIIFVETKRRCDE
LTRRMRRDGWPAMGIHGDKSQQERDWVLNEFRFGKAPILIATDVASRGLDVEDVKFVINY
DYPNSSEDYIHRIGRTARSQKTGTAYTFFTPNNMKQASDLISVLREANQAINPKLIQMAE
DRGGRGRGGRGGYRDDRRDRYSGGRSNFGGGGGYRDRDGDRGFGNGPKTAFGGNKAQNGG
NYGGNNSNSSGNYGNSNYSNSNGQGNFSAPPNQGGGGGFGNQNFQGPPQFGGMQRPAQNG
VNHPPFPFNSQPPPQNQQPPPPPPMVPYPMPPPFPQ
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgcctggcttttcagacagagaccggggcagagatagaggctatggtggcggccctcct
cgtttcggtggcggtggaggaggcaacaggggaggacctcctccgggaaagtttggaaac
cccggagaacggctgaggaagagacactggaacctggatgagcttccaaagtttcagaag
aacttctaccaggaacacctggacgtcacacacagacctctgcaagaggttgaagagtat
cggagaagcaaagaagtcacagtgaaaggcagagattgtcccaaaccgatcgttaaattc
catgaagctgcttttccaagctacgtcatggatgttattgttaagcagaacttcactgaa
ccgactccaatccagtcccagggctggccagtcgctctgagcggcaaagacatggtgggc
atcgctcaaaccggctctgggaaaaccattgcttatcttctgccggcgattgttcacatc
caacatcagccgttcctggagcacggagacggacccatttgcttggttctggcgccgacc
cgggagctggctcagcaggtgcaacaagtggctgctgaatatgggagggcttctcgtctc
aagagtacctgcatctacggtggcgcgcctaaagggccacagataagggacttggagagg
ggagtggagatttgcatcgctactccaggccgtctcatcgatttcctggagtgtggtaaa
accaatctgcgtcgttgcacctaccttgtgctggatgaagccgaccgcatgctggacatg
ggctttgagccacagatccgcaaaatagtggaacaaattcggcctgatcgtcagactctg
atgtggagcgccacctggcccaaagaggttcgtcagctggctgaggacttcctgaaggat
tacgtccagatcaatattggtgcattgcagctcagtgccaatcataacatcctgcagata
gttgatgtctgcaatgacctggagaaggaggacaagctgatccgtttgttggaggagata
atgagcgaaaaggagaacaagaccattatctttgtggagaccaaaagacgttgtgatgaa
cttaccaggagaatgagaagagatgggtggccagcaatgggtatccatggagacaagagt
caacaagagagggactgggttcttaatgagttcagatttggcaaagctccaattctgatt
gctacagacgtggcctcccgtggtttagatgtggaggatgtgaaatttgtcatcaattat
gactaccctaactcctccgaggactatatccaccgcattggccgcacggcccgcagtcaa
aaaacgggcacagcctacaccttcttcacccccaacaacatgaaacaggccagcgacctg
atctctgtgctgcgcgaggctaaccaggccatcaatcccaagctcatccagatggcagag
gacagaggaggtcgcggacgggggggaagaggtggctacagggatgaccgtcgcgatagg
tattcaggcggcagaagtaacttcggtggcggcggcggctacagggacagggacggcgat
agagggttcggcaatgggccaaaaaccgcctttgggggaaacaaagcccaaaacggtggg
aattacggaggcaacaatagcaattctagcggtaactatggcaacagcaattacagcaat
agtaacggacagggtaactttagcgcgccaccaaaccaaggcggcggtggcggcttcggt
aaccagaacttccaaggcccccctcagtttggcggcatgcagaggcccgctcagaacggc
gtgaaccacccgccgttccccttcaactctcagccgccgccacagaaccaacagccgccg
ccaccgccaccgatggtgccctacccgatgccgccgccattccctcagtaa
DBGET
integrated database retrieval system
