Poecilia reticulata (guppy): 103469867
Help
Entry
103469867 CDS
T05149
Symbol
rfc5
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03030
DNA replication
pret03410
Base excision repair
pret03420
Nucleotide excision repair
pret03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
103469867 (rfc5)
03410 Base excision repair
103469867 (rfc5)
03420 Nucleotide excision repair
103469867 (rfc5)
03430 Mismatch repair
103469867 (rfc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pret03032
]
103469867 (rfc5)
03036 Chromosome and associated proteins [BR:
pret03036
]
103469867 (rfc5)
03400 DNA repair and recombination proteins [BR:
pret03400
]
103469867 (rfc5)
DNA replication proteins [BR:
pret03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
103469867 (rfc5)
DNA Replication Termination Factors
ELG1-RFC complex
103469867 (rfc5)
Chromosome and associated proteins [BR:
pret03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
103469867 (rfc5)
DNA repair and recombination proteins [BR:
pret03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
103469867 (rfc5)
Check point factors
HRAD17(Rad24)-RFC complex
103469867 (rfc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_11
AAA_22
AAA_24
AAA_assoc_2
RuvB_N
AAA_14
AAA_16
DEAD
ResIII
DUF815
AAA_7
PhoH
AAA_5
TIP49
AAA_19
AAA_30
ATPase_2
DNAX_ATPase_lid
AAA_2
nSTAND3
Thioredoxin_6
AAA_25
AAA_3
Motif
Other DBs
NCBI-GeneID:
103469867
NCBI-ProteinID:
XP_008416101
UniProt:
A0A3P9NBP3
LinkDB
All DBs
Position
LG9:complement(11145626..11151373)
Genome browser
AA seq
335 aa
AA seq
DB search
MASTSKGQLQTRNLPWVEKYRPQTLDDLISHTDILSTIRRFISEDKLPHLLFYGPPGTGK
TSTILACARQLYKDKEFTSMVLELNASDDRGIDVVRGPILSFASTRTIFKKGFKLVILDE
ADAMTQDAQNALRRVIEKYTENTRFCLICNYLSKIIPALQSRCTRFRFGPLSPDQMKPRL
EHVIEKENIDITPDGMNAIVTLSKGDMRRSLNILQSTSMAYEKVTEHTVYTCTGHPLRSD
IANILDWCLNKDFTSAYKQVLELKTLKGLALHDILSEVHLLVHRVDFPPAIRMGLLIKLA
DIEYRLAAGTNEKIQLSSMVAAFQAVRNLVVSEAC
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccacaagcaaagggcagttacagaccagaaacctaccatgggttgaaaaatac
agacctcagacactggatgatttaatttcacacacagacattctgagcaccatccggagg
ttcatcagcgaggacaagcttccccacctgttgttctacggccctcctggaacaggaaag
acctccaccatcctcgcctgcgcaaggcagctctacaaggacaaagagtttacctccatg
gtgttggagctaaatgcatcagacgacagaggaattgacgtagtccgaggtcctattctg
agtttcgccagcaccaggactattttcaaaaagggcttcaagttggtgatactggatgag
gccgatgccatgacccaggatgcccagaatgcattgcgacgagtcattgagaagtacaca
gaaaacactcgattctgcctgatctgcaactacctgtccaagatcatcccagccctgcag
tctcgctgcaccaggttccgcttcggcccgctgtctccggaccagatgaagcctcgactg
gagcacgttattgagaaggaaaacattgacatcactccagatggaatgaacgccatagtc
actctgtcgaaaggcgacatgagaagatcactcaacatcctgcagagcaccagcatggcg
tacgagaaggtcacagagcacacggtctacacctgcaccggccatcctctccgctctgac
atagccaacatcctcgactggtgcctcaacaaagacttcacttcagcttacaaacaggtt
cttgagctgaagactttgaagggtttggctctgcatgatattctgtctgaggtgcatctg
ctcgtccacagagtggactttcctccggccatacggatgggcctgcttatcaagttagcc
gacatagaataccggctggcggcaggaaccaatgaaaagatccagctgagctccatggtt
gcagccttccaggccgtcagaaacctggtggtcagtgaagcctgttaa
DBGET
integrated database retrieval system
