Poecilia reticulata (guppy): 103470149
Help
Entry
103470149 CDS
T05149
Symbol
rnf180
Name
(RefSeq) E3 ubiquitin-protein ligase RNF180
KO
K15708
E3 ubiquitin-protein ligase RNF180 [EC:
2.3.2.27
]
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pret04121
]
103470149 (rnf180)
Enzymes [BR:
pret01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103470149 (rnf180)
Ubiquitin system [BR:
pret04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103470149 (rnf180)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF180_C
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
C1_2
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
103470149
NCBI-ProteinID:
XP_008416558
LinkDB
All DBs
Position
LG9:complement(17820642..17830932)
Genome browser
AA seq
480 aa
AA seq
DB search
MMSSRMGASRNGGNENEDPSEGNGSNEGHNQRMKPTTSCLSDADQAGQHLAKPALSGRKA
RRKTCPEDKQGRRGDRNQERDEERRFRGKDRGQELSRRMETACADQVQDEPGRGTSECFS
SSNSDMQLKTIFEAGEPSNHSERQHKSSRSQAISFTQTTTTNLRSGRPAVQSRFTHPSSQ
DPLSRDLDPFWAEVRTGRPSQYHSNQTQISESADEEEEDENKDATEEEGCGVIEVTGRAM
YSTETPPCIASGERRMSKREKNRIESLRRRQRRWERWRPSQQPESTQSSAETPTTTSSCS
STEDEETLSMRDKEGFICAVCLDVYFSPYMCHPCNHIFCEPCLRTLAKNNPTHTPCPLCR
TIITHVFFQKELNQTAKTFFPKEYLSRKQNFQRAPCSKWPLPSCRKLFRIFRGFQRQSTP
SVRRQFPHGGGFPLDTIDFEDDSRGWRFDMDMVIIYIYSVNWVIGFFIFCFLCYLFFPSF
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgatgagctcccgcatgggagctagcagaaacggaggaaatgagaatgaagacccgagt
gaaggaaatggcagcaatgagggtcacaatcagcggatgaagccgacgacatcttgtctg
agtgatgcagatcaagctggacagcatctggcaaaacctgccctgtccggaagaaaggca
cgcagaaaaacctgtcctgaagacaaacaaggcagaagaggggacagaaaccaagaaagg
gatgaggagagacgcttcagaggtaaggacagaggtcaagaactgtctagaaggatggaa
acagcatgtgcagatcaagtccaagatgaaccagggagagggacctctgaatgcttttcc
agcagtaactctgatatgcagttaaaaaccatttttgaagctggggaaccatcaaatcat
tcagaaagacaacataaaagttctagatcgcaagctatcagcttcacccaaactacaact
accaatttaagatctgggcggcctgctgttcaaagccgatttactcatccgtcatcacaa
gaccctttatccagagatttagatccattctgggcagaagtgagaacagggcgaccgtca
caataccattcgaatcagacgcaaatctcagagtcagcagatgaagaagaggaggatgag
aacaaggacgccactgaagaagaaggctgtggcgtgatcgaagtgacgggtcgagccatg
tactccacagagacaccaccttgcatcgcttcaggagagaggaggatgagtaaaagagag
aagaacaggattgaaagtctgagaaggaggcagaggaggtgggagagatggagaccaagt
cagcagccggagagcacacagagttcagcagagacccccactaccaccagcagctgcagc
agcactgaggatgaagaaactctgagcatgagagacaaagaaggtttcatctgtgccgtg
tgcttggatgtgtacttcagtccttacatgtgtcacccatgcaaccacatcttctgcgag
ccatgtctgaggacacttgcaaagaacaaccccacccacaccccctgccctctctgcaga
accatcatcactcatgtcttcttccaaaaggagctgaaccaaacagcaaaaacattcttc
cccaaggaatacctttccagaaagcaaaactttcagagagcaccttgctcaaagtggcct
ctcccaagctgcaggaagctcttccgcatctttcgaggtttccaaaggcagtcaacccca
agtgtgagacgccagttcccccatggaggaggattcccactcgacaccatcgacttcgag
gatgactctagaggctggcgtttcgacatggacatggtcataatctacatctactcagtc
aactgggttattggatttttcatattctgcttcctttgctatttattctttccttccttt
tga
DBGET
integrated database retrieval system
