Poecilia reticulata (guppy): 103470168
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Entry
103470168 CDS
T05149
Symbol
ercc8
Name
(RefSeq) DNA excision repair protein ERCC-8 isoform X1
KO
K10570
DNA excision repair protein ERCC-8
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03420
Nucleotide excision repair
pret04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103470168 (ercc8)
09124 Replication and repair
03420 Nucleotide excision repair
103470168 (ercc8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pret04121
]
103470168 (ercc8)
03400 DNA repair and recombination proteins [BR:
pret03400
]
103470168 (ercc8)
Ubiquitin system [BR:
pret04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
103470168 (ercc8)
DNA repair and recombination proteins [BR:
pret03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
103470168 (ercc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WDR55
ANAPC4_WD40
Beta-prop_TEP1_C
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_Vps41
Beta-prop_IFT122_1st
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_RIG_1st
WD_LRWD1
Beta-prop_NUP159_NUP214
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_2nd
Beta-prop_WDR75_2nd
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
103470168
NCBI-ProteinID:
XP_008416597
UniProt:
A0A3P9PW04
LinkDB
All DBs
Position
LG9:18555682..18566836
Genome browser
AA seq
401 aa
AA seq
DB search
MLGFLSARQAGVDDPLRLRRAESTRRVLSLKLNPDREVDRIHGNGINTIDIDAIEGRYML
SGGADGVIVIYDLENHSGKQQYTCRAVRTVGRSSRHVHKFSVETVQWYPYDTGMFVSSSF
DKTMKVWDTETLKPAEVFEFEGNVYSHHLSPIARKHSLIAVGTKNPKIQLCDLKSGSRIH
VLQGHRAEVLAVRWSPRYENILATSSADSKVNIWDVRRASGSLFTLDQHNGEKSKASSQA
ENTAHNGRVNGLCFTSDGLYLLTTGTDDRMRLWNSATGENTLVNYGKVCNESRKRLQLSV
SHGCSPEFVFVPCGSSVAVYALHTGELITMLRGHYNNVDCCEFHPDYQELYSGGKDGNLL
AWVPVVRTADVEEEPNGENEVAASLSAVNPAFQDNWSSDED
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgttgggattcttatcagcaagacaggccggtgtggatgaccctttgcgacttagacgt
gctgagtcaacgagaagagtcctcagtctgaagctaaatcccgacagagaggtggaccgg
atccatggaaatgggattaataccattgacattgatgcgattgaaggcagatatatgttg
tctggaggggcagatggagttattgtcatctatgacctggagaaccacagtgggaaacaa
cagtacacctgccgagctgtccggactgttggaaggtctagtcgacatgtccacaaattc
agtgtggagacagttcagtggtatccttatgacacaggaatgtttgtctctagttccttt
gacaagaccatgaaagtgtgggacacagagactttaaagccagctgaagtgtttgagttt
gagggaaatgtctacagtcaccacctgtcgcccattgccaggaagcacagtctcatcgca
gttggcaccaaaaaccctaaaattcaactttgtgacctgaagtctggttcacggatccac
gttcttcagggtcacagagcagaagtgctggccgtgcggtggtcgccaagatacgagaac
atcttagcaacttccagtgcagacagcaaggtgaacatttgggatgtgcggcgagcttca
ggtagtcttttcactttggatcagcacaacggagagaagtcgaaagcctcgtcacaggca
gaaaacacagcccataacggcagagtgaatggtctgtgttttacttctgatggcctctac
ctcctaaccactggcacagatgaccgcatgaggctatggaatagcgccacaggggaaaac
acactggtgaattatgggaaggtctgcaatgagagccgtaaacggctgcagctctccgtg
tctcacggctgcagcccagagtttgtgtttgtgccatgcggcagctcggtggcggtgtac
gctctgcacacaggagaactgatcactatgctgcggggtcactacaacaacgtggactgc
tgcgagtttcacccagactaccaggagctgtacagcggaggtaaagatggtaacctgctg
gcgtgggtacccgtcgtccgtaccgcagacgtggaagaagagcccaatggtgaaaatgag
gttgctgccagcctttctgctgtgaaccctgcctttcaagacaattggagcagcgatgaa
gattaa
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