Poecilia reticulata (guppy): 103470250
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Entry
103470250 CDS
T05149
Name
(RefSeq) rab5 GDP/GTP exchange factor-like
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
103470250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pret04131
]
103470250
Membrane trafficking [BR:
pret04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
103470250
Protein recycling
Other Rab GTPase associated proteins
103470250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
zf-A20
DUF5601
CSN8_PSD8_EIF3K
PMC2NT
PDS5
Snapin_Pallidin
Herpes_UL25
Motif
Other DBs
NCBI-GeneID:
103470250
NCBI-ProteinID:
XP_008416767
UniProt:
A0A3P9QA89
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All DBs
Position
LG9:complement(21250930..21257072)
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AA seq
460 aa
AA seq
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MWTDKQRGLRVSQEELLCKNACGYYGNPAWKGFCSKCWRERSRPPGSQRQDTRPSSDGVP
PTFSKFEEKKNIEKGRRISTVRRLFWGSSSPPKPQEASESHTKMLKAYESLEPGDFTGFL
KILRSPPSQRLQSRCTAFLNTMEAYHNLQIQKQSDLVQDFYQSFAEYFRSFPETRVTQIM
EHVEKLIMTRLHKWVFCHDSCDDEQKDLALQRRIRSLNWVTPQMLSVPFPDEDTPVTGDP
FLPAITAIIEMDAKRAPQDKLACVSKCSQHIFEALSTSNNEPANADDFLTSLVYVVLKAN
PPRLHSNMQYMIRFGLPHSLMAGESGYYFTNLSCAVAFIEKLDGPALNLSPEQFDGYMRG
QRAPAALRRQQKANATQKLLEELQGRQEKLHQGVDALNMQLQKWVQVVDSQLDEATSQFD
KVQKEITSQAEASEVVTSSAEDGFQQREEEEQQPESEETV
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgtggacagacaaacaaagagggctcagagtttcccaggaggagctgctctgtaagaac
gcctgtgggtattacggaaacccagcgtggaaaggcttctgctccaagtgctggagagag
agatcacgcccgcctggatcacaaagacaagacacgagacccagcagcgatggagtccca
cccacgttctccaaatttgaggagaagaaaaacattgagaagggtcgacgaataagcaca
gtgaggcggctgttctggggcagctcttcacctccaaaaccccaagaggcctctgaaagc
cacactaagatgttaaaagcctatgagagccttgagcccggagacttcactggttttctg
aagatcctgcggagtccaccttctcagcgtctgcagtcccgctgcacagctttcctcaac
acgatggaggcttatcataatctgcaaatacagaagcagtcggaccttgtccaggatttc
tatcagtcttttgctgaatattttagaagcttcccagagactcgggtcactcagataatg
gagcatgtagagaagctcataatgactcggttgcacaaatgggttttctgccatgacagc
tgtgatgacgaacagaaggacctggctcttcagcgccgaatacgctccctaaactgggtc
acaccacagatgctgagtgtgccttttccggatgaagacaccccagtcacaggcgacccc
ttcctgcctgccataacagccataatagaaatggatgccaagcgagcgccacaggacaag
ctagcctgtgtgtcaaagtgcagtcagcacatttttgaagcgctgtccacctccaacaac
gagcctgcaaacgcggatgacttcctgacgagcctggtgtacgtggtgctgaaagccaat
ccgcctcgcctccactccaacatgcagtacatgattcgttttggcctccctcacagcctc
atggctggagagagcggctactatttcacaaacttgtcctgtgctgtggcttttattgag
aaactggacgggccggctctgaacctcagtcctgagcagtttgacggctacatgcgaggc
cagcgtgctcctgctgcgttaaggaggcagcagaaggccaatgccactcagaagctgctg
gaagagctgcaaggaaggcaggagaagctgcaccaaggtgtggatgctctgaacatgcag
ctgcagaagtgggtccaagtagttgattcccagctggatgaggcaacaagccagttcgat
aaggtacagaaggagataacatctcaggcggaggcctctgaggtcgtgacctcttcagct
gaggatggattccaacagagggaggaggaggaacagcagcctgagagcgaagaaacggtc
tga
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