Poecilia reticulata (guppy): 103470347
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Entry
103470347 CDS
T05149
Symbol
pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03030
DNA replication
pret03410
Base excision repair
pret03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
103470347 (pole)
03410 Base excision repair
103470347 (pole)
03420 Nucleotide excision repair
103470347 (pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pret03032
]
103470347 (pole)
03400 DNA repair and recombination proteins [BR:
pret03400
]
103470347 (pole)
Enzymes [BR:
pret01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
103470347 (pole)
DNA replication proteins [BR:
pret03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
103470347 (pole)
DNA repair and recombination proteins [BR:
pret03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
103470347 (pole)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
Sigma70_ner
APP_N
zf-RRPl_C4
Motif
Other DBs
NCBI-GeneID:
103470347
NCBI-ProteinID:
XP_008416950
LinkDB
All DBs
Position
LG9:22823657..22840065
Genome browser
AA seq
2294 aa
AA seq
DB search
MVLQNSGRYKSDRGQSGANQENQDDGSSMSALKRLERSQFTDDMDARFGFDRMKEPGEKT
GWLINMHPTEILDEDKRMISAVDYYFIQEDGSRFKVALPFKPYFYIATKKNCEREVISYL
SKKFQGKVAKLEILPKEDLDLPNHLVGLKRSYIKLSFNTVDDLVKVKREISPAVRKNRER
EQSNDAYTSMLSSALSGGSVISAEEDGTFKSIADQLDNIVDMREYDVPYHVRVSIDLKIH
VAHWYNVRYRGSAFPPEIVRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYM
IDGQGFLITNREIVSENIEDFEFTPKPEYDGPFTVFNEDDEAALIQRWFDHVQETKPNIF
VTYNGDFFDWPFVETRAALHGLSMHKEIGFQKDNQGEYKSSQAIHMDCLRWVKRDSYLPV
GSHNLKAAAKAKLGYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYLYMKYVHPFIF
ALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIVFPNKQEQIFNKLTDDGHVLDSETY
VGGHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVERTMRHAVEEEEKIPLEQVTNFNEV
CGEIKKKLTSLKDVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKP
GATCQRRMAWQWRGEIMPASRSEFHRIQQQLESEKFPPLFPNGAPRAFHTLNREEQAKHE
KKRLADYCKKAYKKTHVTRLEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKL
STAQDNGDAAEVKRCKNMEILYESLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTG
ANIITQARELIEQIGRPLELDTDGIWCVLPNTFPENFVVKTSNDKKPKVTISYPGAMLNI
LVKEGFTNDQYHELVDPASLTYNTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVF
NEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGTTLDEVYASVAKVADYWLDVLYS
KAANMPDAELFDLISENRSMSKKLEEYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYV
ISRKPEGSPVTERAIPLAIFQAEPSVKKHFLRKWLKMPSLHDLDIRSILDWSYYIERLGS
AIQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDIYKQKKISELFTSEGKRQIAHQP
LEADQAADMEDFGAAPRPLQPAILISTKRKRASQGGDSQVESQDVELTQSWREILGPPPP
MGKSREERLVWLRYHKKKWELQLRQRKEKKKRRKLLDGEPQPVGGGVIRGGPSNGLGSFL
RRTARSILDMPWQIVQIAETNHPGLYKLWAVIGNDLHCMKLNIPRVFYVNQKVPKQDEGG
VAYRKVNRMLPRSNIVYYLYEYSVPEDMYQNHINEINADLSAPDIEGVYETQVPLLFRAL
VQLGCVCMVNKHIVRDLAGRETDSFDLDHLEMRSLAQFSYLEPGSVRHMYLYHHSQGQKA
LFGLFIPSQRKASVFILDTVRSNQMPNLSNVYTAERTALLEKTSEELLPPEKHTFEVRAE
NDIKAISRALQRILLNYKDERRGPTLIAVQSNWELQRLAAGMPVLEEFPVVPVHVVDEIN
YNVLDWQRHGARRMIRHYLNLDSCLSQAFDMARYYHLPVGNLPQDVSIFGSDLFLARHLR
KHNHLLWLSPTARPDLGGKEADDSRLVMENDEKGSVEINAQGCYSTACVELDLQSLAVNT
ILQSQHVNDMEGGASLGVSFDVIQQASLEDMMSGNQGASALASYDETALCSNTFRILKSM
VVGWVREITQYHNVYADNQVMHFYRWLRSPSSLLYDPALHRTLHNMMKKVFLQLVAEFKR
LGSTVVYGNFNRIILCTKKRRIDDAIAYVEYITNSIHSREIFHSLSISFSRCWEFLLWMD
PSNYGGVKGKLPSSVLYGEEGAKQKKRKQGEEDEEGSEDEDEDNAEEDDGDAETDEVEEL
IESNWNVMHYLPQTASCQKYFLTIVSAYIAAVYHSMKEELRRNAPGATPVKRRAGSQASQ
QAVGDLSALPGMISFSQEYVASELTQNIFTITQKIQKKVTGTRSVTQTSEMFPVLPGSHL
TLNNPALEFVKYVCQVLSLDANIVNQVNKLKRDLLRLVDVGEFSEEAQFRDPCNSYILPE
VICHHCNFCRDLDLCKDPTVAQDGSVLPQWFCSNCQMQYETESIETALVDALQKKLMSYT
LQDLVCTKCKGVKEANMPIYCACAGNFDLTFSAKSFSEQTAVFRNIASHYNMRFLEETID
WLLEMSPQISQSRH
NT seq
6885 nt
NT seq
+upstream
nt +downstream
nt
atggttttgcagaacagcggacgatacaaatcggacaggggccaaagtggagcaaaccaa
gaaaaccaggatgatggatcctccatgtcggcgctcaagcggctggagcgcagccagttc
accgacgacatggacgcccgcttcggcttcgacaggatgaaggagcccggggagaaaacg
ggctggctgatcaacatgcaccctacggagatcctggatgaagacaaaaggatgatcagt
gccgtggactattattttatccaggaggacgggagcagatttaaggtggctcttcccttc
aagccttacttctacatagctactaaaaagaactgtgagagagaggtcatctcatatttg
tccaagaagttccaaggaaaagtggcgaaacttgaaattctcccaaaggaggacttggac
ctgccgaaccatctagttggactgaagagaagctacatcaagctgtcattcaacaccgtg
gatgatctagtcaaagtcaagcgtgagatttctccagccgtgcgcaagaacagagagagg
gagcagtccaacgacgcctacacatcaatgttgtcgagtgctctgtcaggaggcagcgtg
atctcagccgaagaggacgggacgtttaagagtatcgccgatcagctggacaacatcgtg
gacatgagagagtacgatgtcccttatcacgtccgagtgtccatcgacctcaagatccat
gtggctcactggtacaacgtccgataccgaggcagcgccttccctccagagattgtgcga
cgagacgatctggtggagcgcccggacccagttgttttggctttcgacatcgaaaccacc
aaacttcctctgaaattcccagacgcagagacggatcagattatgatgatctcctatatg
atcgacggacagggctttctaatcacgaatagagagattgtctccgagaacatcgaggat
tttgagttcacccccaagccagaatatgacggacctttcacagtttttaacgaggatgac
gaggctgctctcatccagaggtggttcgatcacgttcaagaaacaaagccgaacatcttt
gtaacctataacggagacttttttgactggccttttgttgagactcgtgcggcgctccat
ggactgagcatgcacaaggaaatcggtttccagaaggacaaccagggagagtataaatcc
agccaggccatccacatggactgcctcaggtgggtaaaaagggacagctacttgcctgta
ggaagtcacaacctgaaggcagcagccaaggctaaactgggctacgatccggtggagctg
gacccagaggagatgtgccgaatggcaactgaggaaccacagacattagcaacctactct
gtgtcagacgctgtggccacatattacctctacatgaaatatgttcaccccttcatcttc
gccctgtgcaccatcatccccatggagcctgatgaggtgctgcgtaagggttcaggcacc
ctgtgcgaagccttgctcatggtgcaggcgttccatgccaacatcgtcttccccaacaag
caggagcagatctttaacaagctgacggacgacggccacgtcctggactctgagacttac
gtgggcggccatgtggaggcgctggagtctggagttttccgcagcgacatcccctgtcgc
ttcaagatgaacccagctgccttcgactttctgcttcaaagagtcgagaggacaatgcgt
cacgccgtcgaagaggaagaaaagattcctctggagcaggttaccaactttaatgaggtt
tgtggtgaaatcaaaaagaagctaacttctttgaaggatgtcccaaacaggatcgaatgc
cccctcatctaccatctggacgtcggggccatgtaccccaatatcattctcacaaaccgt
ctgcagccatcagctatggttgatgaggccacatgtgccgcctgtgactttaacaaaccc
ggagccacctgccagaggaggatggcttggcagtggagaggagaaatcatgcctgcaagc
cgcagtgagtttcaccgcatccagcagcagctggagtcggagaagttcccacctctgttc
cccaacggcgcccctcgggcgttccacactctgaaccgggaggagcaggcaaaacacgag
aagaaacggctggcagactactgcaagaaggcctacaagaagactcacgtcacgcggctt
gaggagcgagttaccaccatctgtcagagagaaaactccttctacgtcgacacagtcaga
gctttcagggatcgccgttatgaattcaaaggacttcacaaagtttggaagaagaagctg
tcaacagctcaggacaatggagatgctgctgaggtgaagcgctgcaaaaacatggagatc
ctgtacgagtctctgcagctggcccacaaatgcatccttaactctttctacggctacgtc
atgagaaaaggggcgcgctggtactccatggagatggctggcatcgtgtgcttcaccgga
gctaacatcataactcaggccagagaacttatcgaacaaatagggaggcctctggagctg
gacactgacgggatctggtgtgtcctccccaacaccttccctgagaactttgtggtaaaa
accagcaatgataaaaaacccaaagtgaccatctcttacccgggggcaatgctcaacatc
ctggtgaaggagggattcaccaacgatcagtaccacgagctggtcgaccccgcctcgcta
acttacaacacccggtcagagaacagcatcttcttcgaggtggacgggccgtatctggcg
atgattctgcccgcctccaaagaggaagggaagaagctgaagaagaggtatgccgtgttt
aacgaggacggctcgttggctgagctcaaaggcttcgaagtgaagaggagaggagagctt
cagctcattaagatttttcagtcctctgtgtttgaggcgttcctcaaaggcaccactttg
gacgaggtctacgcgtcggtggccaaggtggccgactactggctggatgtgctttacagc
aaggccgccaacatgccggatgcggagctgttcgacctgatctcggaaaaccgctcgatg
tccaagaagctggaggaatacggcgagcagaagtccacgtccatcagcacggccaagagg
ctggccgagttcctgggagatcagatggtgaaagatgctggtctgagctgtcgctacgtc
atctcccggaaaccagagggttccccggtcacagaaagggccattcctctcgccatcttc
caggctgagcccagcgtgaagaaacatttcctccggaagtggctgaagatgcccagcctg
catgacttagacatccgctctatcctcgattggagctattacatcgagaggttgggcagt
gcaatccaaaaaattatcaccatccctgcagcgctgcagcaagtgaagaatccagttccc
agagtgaggcatcctgactggctccacaagaaactcctggagaaaaacgacatctataag
cagaagaaaatcagtgaactgttcaccagtgagggcaagagacagattgcccatcagccc
ctggaggctgaccaagctgcagacatggaggactttggggcggcgcctcgacccctgcag
cccgccatcctcatcagcaccaagaggaagcgggcttctcaaggaggggacagccaggtg
gagtcccaggatgtggagctcacgcagtcctggagggaaatcctgggacctccacctcca
atgggaaaatcgcgggaggagcgactggtgtggctgcgctatcacaagaaaaagtgggag
ctgcagctgaggcaaaggaaggagaagaagaagaggaggaagctgctggacggagaaccg
caaccggtcggaggaggagtcattagaggtggccccagcaacgggctgggaagcttcctg
cggcggacagcgcgcagcatcctggacatgccgtggcagattgtgcagattgcagagaca
aaccaccctggtctgtataagctgtgggctgtgattggaaatgatcttcactgcatgaag
ctcaacatcccgcgcgtcttctacgtcaaccagaaagtcccaaaacaagacgaaggagga
gttgcgtacaggaaggtgaaccgcatgttgcctcgctccaacattgtgtactacctgtat
gagtactcagtgccagaggacatgtatcagaaccacatcaatgagataaacgctgacctc
tccgcaccggacattgaaggagtctacgaaacacaggtccccctgctgttccgtgcgctg
gtgcaactgggatgtgtgtgcatggtaaacaagcacattgtgagggatctggccggcagg
gagaccgactccttcgatctggaccatctggagatgagatctctggcccagttcagctac
ctggaacctggaagcgttcgccacatgtacctgtaccatcacagccaaggtcagaaggct
ctgtttggcctcttcatcccctctcagcgcaaagccagcgtcttcatcctggacacggtc
agaagcaaccagatgcccaacctgagtaacgtctacaccgccgagcgcaccgccctcctg
gagaagacgtcagaggagcttctgcctccagaaaaacacaccttcgaggttcgagctgaa
aatgacatcaaggccatctcccgagctctgcagcgcatactgctgaactacaaggatgag
cgacggggacccaccctcattgctgtgcagtctaactgggagctgcagcggctggcagca
gggatgcctgtgctcgaggagttcccagtggttccagttcacgttgtggacgagatcaac
tacaatgtgctggactggcagcggcacggagcccgacgcatgatccgccattacctcaac
ctggacagctgcctgtcgcaggcttttgacatggccagatattaccaccttcctgtgggg
aacctgcctcaggatgtgtccatcttcggctcagacctgttcctggcgagacacctgcgg
aaacacaaccacctgttgtggctttctcccacagcgagaccagacctcggaggaaaagag
gccgacgacagtcgtttggtcatggaaaatgacgagaagggctcagtggagataaacgct
cagggatgttactccacagcgtgcgtggagctggacctgcagagcctggcggtgaacaca
atcctccagtcgcagcacgtcaacgacatggagggcggagccagtctgggcgtcagcttt
gatgtgatccagcaggcctcgctggaggacatgatgtcaggaaaccagggcgccagcgct
ctcgctagctacgacgagacggcgctctgctccaacaccttcaggatcttaaagagcatg
gtggtcgggtgggtgagggagatcacacagtaccacaacgtgtacgcagacaaccaggtg
atgcacttctaccgctggctgcgctctccgagttctctgctctacgacccggcgctgcat
cgcaccctgcacaacatgatgaagaaggtgtttctgcagctggttgcagagttcaaacgt
ctgggatcgactgtggtgtacgggaacttcaacaggatcatcttgtgcacaaagaaacga
aggatagacgacgctatcgcctatgtggaatatatcaccaacagcatacattcgagagaa
atcttccactctctgtccatctccttctcacgttgttgggagttcctgttgtggatggac
ccgtctaactacggcggtgtgaaaggaaaactgccttccagcgtcttgtacggagaggaa
ggagccaaacagaagaaaagaaaacaaggagaggaagatgaagagggcagcgaagatgaa
gatgaggataatgctgaggaagatgatggcgatgcagagaccgacgaggttgaagagctg
attgagagcaactggaatgtcatgcattatctcccccaaacagcctcctgtcagaaatac
ttcctcacgattgtgtctgcctacatagctgcagtttaccacagcatgaaagaggagctg
agacgtaatgctcctggagcaacgccagtcaagaggcgcgcaggcagccaggcttcccag
caggcagtcggggacttgagtgcgcttcctggaatgatctccttctcccaggagtatgtg
gccagcgagctgacgcagaacattttcaccatcacccagaagatccagaaaaaggtgacc
gggaccaggagtgtaacccagacctcagagatgtttcctgtcctgcccggctcccatctg
acgctcaacaatccggcgctggagttcgtcaaatatgtctgtcaggtcctttcacttgat
gccaacatcgtgaatcaggtgaacaaactgaagagagacctcctgcgtctcgtggatgtc
ggagagttttcggaggaggcccagtttcgtgacccctgcaactcctacatactgccagaa
gtcatctgtcaccactgcaacttctgtcgggacctcgacctctgcaaggacccgactgtg
gcacaggatgggtcagtcttacctcaatggttctgctcaaattgccaaatgcaatatgaa
actgagtctattgagacggccctggtggatgctctgcagaagaaacttatgagctacact
ctgcaggatctggtctgcaccaaatgcaaaggggtaaaagaagccaacatgcccatttac
tgcgcatgtgccggaaactttgacctcaccttctcagccaagagcttctccgagcagacg
gcagtgtttcggaacatagcctcccactacaacatgagattcctggaggagaccatcgac
tggctgcttgagatgagccctcagatcagccagagcaggcactga
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integrated database retrieval system
