Poecilia reticulata (guppy): 103470382
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Entry
103470382 CDS
T05149
Symbol
taf5l
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103470382 (taf5l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pret03021
]
103470382 (taf5l)
03036 Chromosome and associated proteins [BR:
pret03036
]
103470382 (taf5l)
Transcription machinery [BR:
pret03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
103470382 (taf5l)
Coactivators
SAGA/TFTC/STAGA complex
103470382 (taf5l)
Chromosome and associated proteins [BR:
pret03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
103470382 (taf5l)
STAGA complex
103470382 (taf5l)
TFTC complex
103470382 (taf5l)
SAGA complex
103470382 (taf5l)
SLIK complex
103470382 (taf5l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
EIF3I
TFIID_NTD2
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
ANAPC4_WD40
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_Vps41
PROPPIN
Nbas_N
PEP5_VPS11_N
Beta-prop_WDR19_1st
WD_LRWD1
WDR54
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
103470382
NCBI-ProteinID:
XP_008417022
UniProt:
A0A3P9QE43
LinkDB
All DBs
Position
LG1:27558996..27564665
Genome browser
AA seq
599 aa
AA seq
DB search
MKRVRAEQIQYAVAQYLKRRQYVDTDSSLKGAKLFQSTEELAAGLTVQTESGYANIVSAA
PCQPDPQQYEVQFSRLRCFLSETEISYAQEVSSLLYPLFVYLHLDMVHCGLKGAVDSFYV
RFHDAFLHDGEQRSVVEQLRHVVTAQDVAAYPKLRSFLEHKYVVHLTEPAHSYLLRYLQS
DDNSAICRALSTHLQVEVTASRRTEYQLYGAAAGSMAAANAGSWAGGGEGGAEAVEVPAG
IPQNEVALLALQDCIKKVREGPPSLTTICFYAFHHTEQMLNAAEVSPDSRLLAAGFDSSA
VKLWSLRARKLKAKPHQADVSYIHLACDVQEEEVDEEDGCGSEVKMLRGHSGPVYRTAFL
TDSSGLLSCSEDSTIRYWDLGSFTNTVLYQGHSYPVWDLDVSPCSLYFASGSHDRTARLW
TFSRSYPLRLYVGHLSDVDCVKFHPNSNYVATGSADKTVRLWSTQQGQSVRLFTGHRGAV
LALAFSPNGKYLASAGEDQRVKLWDLAAGTLFKELRGHADSITSLSFSPDSSLVASSSID
NSVRVWDIRSAHGGAPAADGSSGELVGQYVGNTSNVLNVQFMACNLLLVTGTALEKTEP
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgggtccgggccgagcagatccagtacgctgtggctcagtacctgaagaggaga
cagtatgtggatactgacagctccctgaaaggagccaaactcttccagtccacagaagag
ctggctgctggtctgactgtgcagacggagtcgggctacgccaacatcgtctctgctgct
ccctgccagcccgacccgcagcagtatgaggtccagttctccaggctccgctgctttctc
tcagaaacagaaatctcatatgcccaggaggtcagcagcctcctctacccgctcttcgtt
tatctccaccttgacatggtgcactgcggcctgaagggggcagtagacagcttctacgtc
cgttttcacgacgcctttcttcacgacggggagcagcggtcggtggtggagcagctccgc
cacgtcgtcacggcgcaggacgtcgccgcctatcccaagctgaggtctttcctggagcat
aagtatgtggttcacctgacggagccggctcacagctacctgctgcgctacctccagagc
gacgacaacagcgccatctgcagggcgctcagcacacacctgcaagtggaggtcaccgct
tccaggcgaaccgagtaccagctgtacggagccgccgcaggctccatggcggccgccaac
gccggctcctgggcgggcggaggcgagggcggcgccgaggcggtggaggttcccgccggg
atcccgcagaacgaggtggcgcttctggcgctgcaggactgcatcaagaaagtccgcgaa
ggcccgccgtcgctcaccaccatctgcttctacgccttccaccacacggagcagatgctg
aacgcggcagaggtttcgccggacagccggctgctggcggccgggttcgacagctccgcc
gtgaagctgtggagcctccgggccaggaagctgaaggccaaaccgcaccaggccgacgtg
tcgtacatccacctggcgtgcgacgtgcaagaggaggaggtggacgaggaggacggctgc
ggcagcgaggtgaagatgctgcgcggccacagcggtcccgtctatcgcaccgccttcctg
accgacagctccggcctgctgtcctgctccgaggactcgaccatccgctactgggacctg
ggcagcttcaccaacacagtgctgtaccagggccacagctacccagtgtgggacctggac
gtcagcccctgcagcctctacttcgccagtggctcccatgaccgcaccgcccgcctctgg
accttctcgcgctcctacccgctacggctctatgtcggccacctgtccgacgtcgactgc
gtcaaattccaccccaattccaactacgtggccaccggctccgcggacaaaacggtgcgg
ctgtggagcacccagcagggccagtcggtgcggctcttcacgggccaccgcggcgccgtg
ctggcgctcgccttctcgccgaacgggaagtacctggcgtcggccggcgaggaccagcgg
gtgaagctgtgggacctggcggcggggacgctgttcaaagagctgcgcggccacgcggac
agcatcaccagcctgtccttcagcccggacagcagcctggtggcgtcctcctccatagac
aactccgtccgcgtctgggacatccgcagcgcgcacggcggggcgccggccgccgacggc
tcgtccggcgagctggtgggtcagtacgtgggaaacaccagcaacgtcctgaacgtccag
ttcatggcctgcaacctgctgctggtcacaggaacggcgctggagaaaaccgagccgtag
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integrated database retrieval system
