KEGG   Poecilia reticulata (guppy): 103470600
Entry
103470600         CDS       T05149                                 
Symbol
sf3a1
Name
(RefSeq) splicing factor 3A subunit 1 isoform X1
  KO
K12825  splicing factor 3A subunit 1
Organism
pret  Poecilia reticulata (guppy)
Pathway
pret03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pret00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103470600 (sf3a1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pret03041]
    103470600 (sf3a1)
Spliceosome [BR:pret03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    103470600 (sf3a1)
 Complex B
    103470600 (sf3a1)
 Complex C
   U2 SnRNP specific factors
    103470600 (sf3a1)
SSDB
Motif
Pfam: Surp PRP21_like_P ubiquitin Rad60-SLD Ubiquitin_2
Other DBs
NCBI-GeneID: 103470600
NCBI-ProteinID: XP_008417387
UniProt: A0A3P9P0W3
LinkDB
Position
9:complement(11476498..11482520)
AA seq 786 aa
MPPGPVQIVQPEPNNKQNDGPAEETPATKPIVGIIYPPPEVRNIVDKTASFVARNGPEFE
ARIRQNEINNPKFNFLNPNDPYHAYYRHKVNEFKEGKAQEPSAAVPKVMQQQAMQQSQQL
PQKVQSQVIQETVVPKEPPPDFEFIADPPSISAFDLDVVKLTAQFVARNGRQFLTQLMQK
EQRNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLLIKLKKEAENPKEVMDQVRYRVE
WAKYQERERKKEEEEREKERVAYAQIDWHDFVVVETVDFQPNEQGHFPPPTTPEELGARI
LIQERYEKYGESEEVEMEVESEDEEDEREKRADGQPSQPDQDTQVQDMDEGSDDEDEGVK
APLPPDNPMPPPLPPAPEQVIIRKDYDPKASKPQPSVAAPDEYLISPITGEKVPASKMQE
HMRIGLLDPRWLEQRDRSIRDRQTEDEVYAPGLDIESSLKQLAERRTDIFGVEETAIGKK
IGEEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVGEDETKEKIGP
SKPNEIHQPPPMPSSAPSLPKPSPPVTAVARPPISVAPPVRTTLLSAVPVIPRPPVTPVV
RLAPGQVITQMPPMIPAPRVNVVPMPPAPHLMAPRPPPMVVPTAFVPAPPMPQPPSAAPA
PPVHPPPPHEDEPMSKKMKTEDNLIPEEEFLRRNKGPVAVKVQVPNMQDKTEWKLNGQVL
NFTVPLTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMTNGSIIHLALKE
RGGRKK
NT seq 2361 nt   +upstreamnt  +downstreamnt
atgccgcctgggcccgttcagatagttcagccggagcctaacaacaagcagaatgatgga
cctgcagaagagactccagccactaaacccattgttggcatcatataccctcctccagaa
gtccgaaacattgtcgacaagacggccagttttgttgccaggaatggaccagagtttgaa
gcaagaatccgtcagaatgagatcaacaaccccaaatttaatttcctcaaccccaacgat
ccctaccatgcttactaccgccacaaggtcaatgaatttaaggagggcaaggcacaagaa
ccatctgcagcagtgcctaaggtcatgcagcagcaagccatgcagcagtctcagcagctt
cctcaaaaggtgcagtcgcaggtgattcaggagaccgtggtccccaaagagccacccccc
gactttgagttcattgcggaccccccatcaatctctgcgtttgatctggatgttgtgaag
ctcactgctcagtttgtggctcgcaatggccgacagtttctcacccagctgatgcagaag
gagcagaggaactaccagtttgactttctgcgcccacaacacagcctcttcaactatttc
accaaactggtggagcagtacacgaagatcctgattcctcccaaaggcctgctgatcaaa
cttaaaaaagaagctgagaatccaaaggaagttatggaccaggtgaggtaccgagtcgaa
tgggcaaaataccaggagcgtgagagaaagaaggaggaagaggagagggagaaggaacgg
gtcgcttatgcccaaatagactggcatgattttgtggtggtagagacggtggatttccag
cccaatgaacaaggtcacttccctccacccacgacaccagaggagctcggcgctcgcatc
ctgatccaggagcgctacgagaaatacggagaaagcgaggaggtggagatggaggtggag
agtgaggatgaagaggatgaacgagagaagcgggccgacggccagccttcacagcctgat
caagacacacaagtccaggacatggatgagggatctgatgacgaagatgaaggtgtgaag
gctccgttgccaccagacaacccgatgccacccccgctgcctccagctccagaacaggtt
attattcgcaaggactacgaccccaaagcttccaagccgcagccctcggttgcagctcca
gacgaataccttatttcaccaatcactggtgagaaggtccccgccagtaagatgcaggag
cacatgcgcattggcctgctggatccacgctggcttgagcagagagaccgaagcatcaga
gacaggcagacggaggacgaagtctacgctcccggtttggacatcgagagcagcttgaag
cagctcgccgagaggcgtactgatatctttggtgtggaagagacggccatcggaaagaag
atcggcgaggaggaaattcagaagccagaagaaaaggtcacctgggacggccactcgggg
agcatggctcgcacgcagcaggcggcgcaggccaacatcactctgcaggagcagatcgaa
gccattcacaaggccaaagggctggtgggagaggatgaaacgaaggaaaaaatcggtccc
agcaagccaaatgaaattcatcagcctcctcccatgccctcatcggcaccaagtctgcct
aaacccagtcctcctgtcacagccgtggcacgcccacccatctctgtggctcctccagtc
cgtaccactctgttgtctgccgtacctgtgattccacggcccccggtgactcctgtggtg
cgtctggcgccaggtcaagtcattacacagatgccgcccatgattcccgctcctcgtgtc
aacgtggttcccatgccaccagcgccccacctcatggcccccagaccacctcctatggtt
gttccaactgcgtttgtccccgctcctcccatgccacaaccacccagcgctgccccagcg
ccgcccgtccacccaccccctcctcatgaggacgaaccaatgagcaagaagatgaagacg
gaggacaacctcatcccagaggaagagttccttcgtcgaaacaagggtcctgtggcagtc
aaagtgcaagtccccaacatgcaggacaagaccgaatggaagctaaatgggcaagtgtta
aatttcactgtcccacttaccgaccaggtgtctgttattaaagtcaaaatccatgaggca
acaggcatgcctgctggaaaacagaagttgcagtatgagggcatcttcatcaaggactca
aactctctggcttattacaacatgaccaatggttccatcatccatttggctctgaaggag
agaggtggaagaaagaagtga

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