Poecilia reticulata (guppy): 103470617
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Entry
103470617 CDS
T05149
Symbol
gapvd1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pret04131
]
103470617 (gapvd1)
Membrane trafficking [BR:
pret04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
103470617 (gapvd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5740
Motif
Other DBs
NCBI-GeneID:
103470617
NCBI-ProteinID:
XP_008417421
LinkDB
All DBs
Position
LG9:29295636..29333563
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AA seq
1486 aa
AA seq
DB search
MVKPDIHTLAHHLKQERLYVASEKQLIQRLNSDVLKTAERLYRAAWIAKQQRINLDRLIL
TSVEASPAECCQHAKMLEDTQFIDGYKTLGFQETIYGEFLARLRENPRLVASCLVAGERL
NQEHTQGVIHNVFTSLYGNCIMQEDESYLLQVLRYLVEFELKENDNPRRLLRRGTCAFSI
LFKLFSEGLYSAKLFLTATLHEPIMQLLVEDEDHLETDPAKVTERLTPAQQERFGEKGSE
DYKQRVQAAVEANEAKLVALVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVEQLEVGE
VRTMCTDLLLTCFICPAIVNPEQYGIISDAPINEVARFNLMQVGQLLQQLAMADDDIDPR
RKSSLSKFDKSCVAAFLDVVIGGRAVETPPMSSMNLLEGLSRTAVYITHSQLLALVDFVR
SVMAGDHLREEEHMALETLLANVPHSRTVKSNSLELTPSNTPQLSPATTPANKKNRLPIG
QHLAAITSWDPSTTTLSAHIPLVTPFAAARSRSRTNIAQEGEAEASSQESLQELMPEEVL
VISLGTGPQTVPGMMSENEVLNLQMSDGPQGDGPADDTKLHGKPDKTLRFSLCSDNLEGI
SEGPSNRSNSVSSLDLEGESVSELGAGPSGSNGVEALQLLEHEQATTQDNLDDKLRKFEI
RDMMGLTDDRDISETVSETWSTDVLGSDFDPNMDEDRLQEIAGAAAENMLGSLLCLPGSS
SVLLDPYGSTMSETTSEAWSVEVLPSDSEAPDLKQEERLQELESCSGVGSTSDDTEVREV
SSRPSTPGLSVVSGISATSEDIPNKIEDLRSECSSDFGGKDSVTSPDGEESGQGAHHLTS
PPSQADSLLAMFDPLSTGEGSSTGTIVRPKVHYARPTHPPPDPPIPEASAMGPDIRHSIC
TAQCLAQAELEQSKQRHSFPDRLVRSRSSDIVCPGRRPTSDPGLNRRVAVEERDPPGAFA
AGPSSSPSKDSLKGEVEDRKDSDDEKSDRNRPWWKKRFVSAIPKVLYWTAESDVPAPMTA
FRKKDKHEKEDAAQDRVPQDDPVPRQNTQVQAAEDILDKYRNIKRTSPSDGATGGASYDG
SGELCVEDNVNDPPREDALQNISADDLPDSASQTAQQHDSKFSFSDAKKKLRLALCSADS
VALPIMAPTTTRNGLPDHMDPEDNEIVCFLKVQLAEAINLQDKNQMAQIQETTRCVSRFD
ARTCRKLLAAIAEDYRKRAPYIAYLTRCRQGLQTSQAHLERLLQRVLRDKEVANRYFTTV
CVRLLLEHMETKMLEFIKAFQGCTAADDKTAAVEDFLRYLYGAMARDAIWQYASEDQLQD
AQMAIERSVMNRIFKLAFYPNQDGDILRDQLFHEHIQRLSKVVTANHKALQIPEVYLKEA
PWPSAQAEIRTINAYKTPRDKVQCILRMCSTIMNLLSLANEDSVPGADDFVPVLVFVLIR
ANPPCLLSTVQYINNFYASRLSGEECYWWMQFTAAVEFIKTIDDRK
NT seq
4461 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagccagacatccacactctggcccaccacctaaagcaggagcggctgtatgtg
gcatcggagaagcagctgatccagaggctcaacagtgatgtgctgaagacggctgagagg
ctgtaccgggcggcctggatcgccaagcagcagaggatcaacctcgatcggctcattctc
accagtgtggaggcctctccggctgagtgttgccaacatgcaaagatgctggaagatacg
cagtttattgacggctacaagactctgggtttccaggagacgatctatggcgagttcttg
gccagactgagggaaaaccccagacttgttgcgtcctgcctcgtggcaggagaaagactt
aaccaggagcacacccagggcgtcatccacaacgtcttcacctcactttatggcaactgt
atcatgcaggaggatgagagctacctgctgcaggtgttgcgatacctggtagaattcgag
ctgaaggagaacgacaacccccgccgtcttctgcgacgtggaacctgtgccttcagcatc
cttttcaaactcttctcagagggcctgtactctgccaagctcttcctcaccgccaccctt
cacgaacccataatgcagctgctggtggaggacgaggatcacctggaaaccgacccggcc
aaggtgacggagcgcctcaccccggcccagcaggaacgcttcggggagaaaggctctgag
gactacaagcaaagagttcaggcggctgtggaggccaacgaagccaagctggttgccttg
gtgaacaagttcatcggttacctgaagcagaacacctactgcttcccacacagcctgcgc
tggatcgtgtcccagatgtacaagactctgtcgtgtgtggagcaactcgaggtgggcgag
gtgcgcaccatgtgcaccgacctcctgctgacctgtttcatttgcccggctatagtcaac
ccagaacagtacggcattatctcagatgcgcccatcaatgaagtggctcgttttaatctc
atgcaggtggggcagcttttgcagcagctagccatggctgatgatgatatagaccccagg
aggaaaagcagtttgtctaagtttgataagagctgtgttgccgcttttctggatgtggtg
attggaggacgagcagttgagaccccgcccatgtcctccatgaatctcctcgaagggctc
agtagaactgcagtctacattactcacagtcagttgcttgcactggtggacttcgttcgg
agcgtaatggcaggcgaccaccttcgagaggaggagcacatggccctggagactctgctg
gctaacgtcccccattctcgaaccgtgaagagcaacagtttggagctgactccttccaac
acccctcagctttccccagctacaacccctgccaacaagaagaacagattacctatagga
caacatttagctgctataacatcctgggacccctcaaccaccactctgtctgctcacatt
ccattagtaaccccttttgcagctgctcgcagccgtagccgtaccaacatagcccaggag
ggggaggcagaggccagctcccaggagtccctgcaggaattgatgccagaggaggtgcta
gtaatttcactcggaactggtcctcaaactgtccctgggatgatgtcagagaatgaggtt
ttgaacttgcagatgtctgatgggccccagggggacggcccggctgacgacactaagctg
catggtaaaccagacaaaaccctgcgcttctcgctgtgcagcgacaacttggaaggaatc
tcagagggaccatccaatcgttccaactctgtgtcctctctggacctggagggagagtcc
gtttccgagttgggggccggcccgtcggggagcaacggcgtagaagcgctgcagctcttg
gagcacgaacaggctaccacacaggacaacctggatgacaaactgcgcaagtttgagatc
agagacatgatgggtctgacggatgaccgtgacatctccgagacggtcagtgaaacctgg
agcactgacgtccttggcagcgactttgacccaaatatggatgaagatcgactgcaggaa
atagcaggggcagcggcggagaacatgcttggcagcctgctgtgccttcccggctccagc
tcggttctgctggacccctacggctccaccatgtcagagaccacgagcgaggcctggagc
gtggaggtccttccgagtgactcagaagccccagacctgaagcaagaggagcgtctgcag
gagctggagagctgctctggcgttggcagcacctcggatgacaccgaggtcagagaagtc
agctcgagacccagcacaccaggcctcagtgttgtctcaggtatcagtgcgacctcggaa
gacatcccaaacaagatcgaggacctgcggtcagaatgtagctcagattttggtgggaag
gactccgtgaccagtcctgatggcgaggagtcgggtcaaggagcccaccatctgacatct
ccgccttcacaggccgattctttgctcgccatgtttgatccgctctccactggtgaaggc
tcctccacagggacaatagttcggcccaaggtgcactacgccaggcccactcaccctccc
cctgaccctcccatacctgaagccagtgccatgggcccggacatacggcactccatttgc
acagctcagtgcttggcccaggctgagctcgagcaatcaaagcagcgccattccttcccc
gacagactggtccgcagtcgcagttctgacatcgtgtgcccaggccgccggcccacgagc
gacccaggccttaacaggcgggtggcggttgaagagcgtgaccctcccggggccttcgct
gccggaccttcctcgtcgccgagcaaggactccctgaaaggagaggtggaagacagaaaa
gacagcgacgatgagaaatctgatcgcaacagaccctggtggaagaaacgttttgtgtct
gccattcccaaagtgctgtattggacggctgagagtgacgtcccagcgccgatgacggcg
ttcaggaagaaggacaaacatgagaaggaagatgctgcacaggaccgtgtcccacaagat
gacccagtgccaagacagaacactcaagtacaggcagcagaggacatcctggacaagtac
aggaacatcaagaggaccagcccgagtgatggagccaccggaggagcctcttatgatgga
tcaggagagctgtgtgtggaggacaatgtgaatgaccctcccagagaagacgctctgcaa
aacatctctgcagatgatctgccagactcagccagccagactgcacagcagcacgattcc
aaattctctttcagcgacgcaaagaaaaagctgaggttggctttgtgctctgcagactct
gtagctctccccatcatggcgccaactacaacacgtaacggactgcctgatcacatggat
cctgaagacaatgagatcgtctgcttcctgaaggtccagctggcggaggccatcaacctt
caggataagaaccagatggcccagattcaggagaccacacgctgcgtcagccgtttcgac
gcgcgcacctgcaggaagctgcttgctgccatcgcggaagattacaggaagcgggctccg
tacatagcctatctaacccggtgccgccagggtctgcagacatctcaggcccacttggag
cggctcctacagagggtgctgagagacaaggaggtggcaaaccgctacttcaccaccgtc
tgcgttcgcctcctcctcgaacatatggagacaaagatgctcgagttcattaaagctttc
caggggtgcacggcagccgatgacaagactgcagcagtggaggattttctgcgctacttg
tacggtgccatggcccgtgatgccatttggcagtatgcaagcgaggaccagctgcaggat
gcccagatggctatcgagcgcagcgttatgaaccgcatcttcaaactggccttctacccc
aatcaggatggagatattctcagagaccagctgttccatgaacacatccagcggctttca
aaagttgtgacggcaaatcacaaggctctgcagatccctgaggtttaccttaaagaggct
ccctggccttcagctcaggctgagatcaggaccatcaacgcatacaagaccccacgagac
aaagtccagtgcatactgcgtatgtgctccaccatcatgaatctgctgagtctagccaac
gaggactctgtgccaggagcagacgacttcgtcccagtcctcgtcttcgtcctcataaga
gcaaacccgccctgcctgctgtccaccgttcagtacatcaataatttctacgccagccgg
ctgagtggggaggagtgctattggtggatgcagttcaccgctgcggtggaattcattaag
accatcgacgatcgcaagtga
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