Poecilia reticulata (guppy): 103471027
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Entry
103471027 CDS
T05149
Symbol
herc3
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103471027 (herc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pret04121
]
103471027 (herc3)
Enzymes [BR:
pret01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
103471027 (herc3)
Ubiquitin system [BR:
pret04121
]
Ubiquitin ligases (E3)
HECT type E3
103471027 (herc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
103471027
NCBI-ProteinID:
XP_008418020
UniProt:
A0A3P9MY40
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All DBs
Position
LG1:complement(30796004..30831351)
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AA seq
1049 aa
AA seq
DB search
MLCWGNARDGQLGIGAERNPAFEPRSCHVFSGRGLKEVACGGQHTLFLLHDGSIYTCGSN
CCGQLGHNRDGTSPELVGALDTQKITMVSCGRAHSMAINEQGQVFAWGAGEGGQLGLGTV
EAAVRIPRLVKRLCDHSISQVMCGNQHCIALSRDGQLFTWGQNTSGQLGLGKGEPSKLTP
HPLKSLAGIPLAQITAGGDHSFALSLSGAVFGWGKNRAGQLGLNDKQDRAVPCHIKFLRS
QKVVYICCGDEHTAALTKDGGLFTFGDGSWGQLGHGSTNSELLPRRVLELMGTEVSQISC
GRHHTLALVPSSSMVYAFGCNSHGQLGTGILGDSRSPFPVKSSFLTGNLQRRDSKQYTVI
KIICGGDHSFLLYSNEQSSAATEDFRVVNVGKSLAPINYEQLNSWRLKMMYNTDSAVAND
IVIQLSSTACWNASFLDQSDDAHFKTNPKIPGIDLDSVRTLFEVLSKPAFSGLLEQASKS
FESLLIPQLPRSPPDVEAMRIYLILSEYPALQDSKNYIRLTIPLAMAILRLDANPSKVLD
NWWCFMDGSFFTRMVDMYKSIVVFMLTGGKTILVPVFYDNYFLATLQLLEKLHKVNLRAN
HVEYSRFYIPDISSLVDIQEDYLKWFLTKADIKTGSSPSQQNDFPSVNLCAFPFILNAQA
KTTMLQTDAELQMQMAVSGANLHNVFMLLTLEPHLARNPYLVLHVRRDHLVSDTLRELTM
YSDVDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELLDPVYGMFTHYKDSNLLWFSDKC
FVEQNWFHLIGIVCGLAIYNSTVVDLHFPLVLYKKLLDVSPSLDDFKELSPTEARSLQQL
LDYEGGDVEETFLLSFAITRENYGMTEIKELIPGGESIAVDKNNRKEFVEAYLRYVFSDS
VSEQYSAFSAGFLKVCGGEILSLFQPSELMAMVVGNNNYNWEEMEKNAVYKGEYTATHPT
VRLFWEVFHEFPLEKKKQFLLFLTGSDRIPIHGMESLRIVIQSTTAEEHYLPVAHTCYNL
LDMPRYQTKETLCRRLTQAVEQYEGFSLV
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgctgggggaacgccagggatgggcagctgggcatcggcgcggagaggaacccc
gcgtttgagcccaggagctgccatgtgttcagcgggcggggactgaaggaggtcgcgtgc
ggagggcagcacacgctgttcctgctgcacgacggcagcatttacacgtgtggctccaac
tgctgtggacagctgggccacaacagagatgggacgtccccagagctggttggggctctg
gatacccagaagataacgatggtgtcgtgcggccgggcgcattcgatggccatcaacgag
cagggccaggtgttcgcatggggagccggagaaggcgggcagctcggcctggggacagtg
gaggcggccgttcgaatcccgaggttggtcaaaaggctttgtgaccacagcatctcccaa
gtgatgtgtgggaaccagcactgcatcgcactttctagagatggtcagctgttcacttgg
ggtcagaacaccagcggccagctgggcctgggtaaaggagagccgagcaaactgacgcct
catcccctgaagtccctggcagggattcccctggctcagataactgctggaggagaccac
agtttcgccctctcactgtcgggagccgtcttcggatggggcaaaaacagggcggggcaa
cttggactgaatgacaaacaagatcgagccgtcccgtgtcacatcaagtttctgaggtca
cagaaggtcgtttatatctgctgtggagatgagcacaccgcggccctcacaaaggacgga
ggcctgtttacgtttggcgacggctcatggggtcagctgggtcacggctccaccaacagt
gagcttctaccgaggcgagtcctggagctgatgggcactgaggtttcccagatctcctgt
ggcaggcaccacactctggccttagtcccgtcgtccagcatggtttatgcattcggctgc
aacagccacggccagctgggcacgggaatcctgggggattcaagaagcccgtttcccgtc
aagtccagcttcctgactggaaacctgcagagaagagattcaaagcaatatacagttata
aaaatcatatgtggaggagaccacagtttcttattgtactccaacgaacagagttctgct
gccacggaggacttcagagtggttaatgtcggtaaaagcctcgccccgatcaactacgaa
cagttaaactcatggagattaaaaatgatgtacaacacagactctgccgtggcaaatgac
attgtgatccagctctcctcgacggcctgttggaacgccagcttcctggaccaaagtgat
gacgctcacttcaagaccaacccaaagatcccgggtatcgatctggactcggtcagaacg
ctgttcgaggttctcagcaaaccggccttctctggactcctggaacaggcctccaagagt
tttgagagcctgctgatcccccagctgccgcgctcgccgccggacgttgaggccatgagg
atctacctcatcttgtccgagtaccccgccctgcaggactccaagaactacatccgcctc
actattcccctggcgatggctattctccggctagacgccaaccccagcaaagtattggat
aactggtggtgcttcatggacggcagcttcttcaccagaatggtcgacatgtacaaaagc
atcgttgtgttcatgctgacgggcggcaagacgatcctggtgcccgtcttctacgataac
tacttcctggccacgctgcagctgctggagaaactccacaaggtaaacttgagggcgaat
cacgtggagtacagtcgcttttacatcccagacatcagcagcctggtggacatccaggag
gactacctcaaatggtttctgactaaagctgacattaaaacgggctcctccccatcacag
cagaacgactttccctcagtgaacctctgtgccttcccgttcatcctgaacgcccaagcc
aagacgacaatgctgcaaacagacgctgaactgcaaatgcagatggccgtcagcggtgca
aacctgcacaacgtcttcatgctgctcacgctggagccccacctcgctaggaacccatat
ctggtgctgcatgtgcgcagggaccatttagtcagtgacacgctgcgggagctcaccatg
tactctgacgtggatctgaagaagcccctcaaggtgatcttcgacggtgaggaagccgtc
gacgcgggcggcgtaactaaggagttcttcctgctgctgctaaaggagcttctggatcct
gtttatgggatgttcacccattataaagactccaacctgctgtggttctccgacaaatgt
tttgtggagcagaactggtttcatctgatcggcatcgtctgcggtctggccatctataac
tccactgtggtggatctgcactttcctctggtgctctacaagaagctactggacgtgtcg
ccttcgctggacgatttcaaagagctctcgccgacagaagccaggagtcttcagcaactt
ctagactatgagggaggagacgtagaagagacgtttcttctcagcttcgctatcacaagg
gaaaactacgggatgacagaaatcaaggagctgattcctggaggagagagcatcgctgtg
gacaaaaacaacaggaaggagtttgtggaggcctacctgcgctacgtgttctccgactcg
gtgagcgaacagtactcggccttctccgccggcttcctgaaagtgtgcggaggggagatc
ctgtcgctgttccagccctcggagctgatggccatggtggtcgggaacaacaactacaac
tgggaggagatggaaaagaacgccgtttacaaaggggagtacaccgccactcacccgaca
gtccgacttttctgggaggttttccacgaattcccgctggagaagaagaagcagttctta
ttgttcctgacgggaagcgaccgcatccccatccacggcatggagagcctccgcatcgtc
atccagtccaccacggcggaggagcactacctgcccgtggctcacacctgctacaacctg
ctggacatgccgcgctaccagaccaaagagacgctgtgccgccgcctgactcaggccgtg
gagcagtacgagggcttcagcctggtctga
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