Poecilia reticulata (guppy): 103471215
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Entry
103471215 CDS
T05149
Symbol
atrx
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
103471215 (atrx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pret03000
]
103471215 (atrx)
03036 Chromosome and associated proteins [BR:
pret03036
]
103471215 (atrx)
Transcription factors [BR:
pret03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
103471215 (atrx)
Chromosome and associated proteins [BR:
pret03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
103471215 (atrx)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
103471215
NCBI-ProteinID:
XP_008418285
LinkDB
All DBs
Position
LG10:complement(26961243..26998549)
Genome browser
AA seq
2215 aa
AA seq
DB search
MSLASSESNLDQMGEKGEEPGSSSESMKPSSSRSRRKPTNVTKHTEQKDSDASTNSENEG
ATSDSNTGSGSKGTLVIKPSGNESKGAMKLRVDFKQKKTDDTLEKKVNCTACGKQVNQFQ
RNSVYEHPMLKVLICKSCFKYYTSDDIGRDSDGMDEQCRWCAEGGKLICCDYCNNAFCKK
CILRNLGRKELSNITDENSKWHCYVCRSEPLQDLVSNCHSIMQRKEEVEMKQRKTDKAEE
REGKKEKKKSPKEQKAIANGKEHSEGLGTMTFSYKNLQIPKDLIKKTKKLVETTTGLNNT
FIQFIQQATDDQADATIRYRHLKAFKAVLSDLRKAHNALEEALKPEFRNMELQNGTEGQH
VRKTGNVVEPAENNEMDCSADSLPGEDGEQLNEVKPICDAEEMKESKQPPNENDSVCKSG
KTKKVSKEQDSIGDLVGKMETVEELPNEIEVSRKESPKKPSNETDSVDETETMDEGVKEL
DNQQDMKSEDEVSNKPEMEDHQTETSVPKKTIKSEVFDGEPVSTAETSLDHDIMSVPPSV
PEELFQMVESLADSSMLSQTDTSSAKDVDTKSNEHPPETQCPQPRVKNLIVKLTPVPVVK
SSSSRSSRSKDKENTEQSSKSKEKDKDKKDSDSSRAEEADSPPPTRRSSRVKTTPLRKQG
ENKGKKDSSESESDGDSKARVKLSKKPSNTKKETKRSAKTSEDSDSDEVPPVLLEKAATG
NSSTDEERESTTKKRLFKSDTSSKDAETLTKRKRKSESSGSDAENKDKKTSKKKKKKQAS
SDNSNSDSDGESKNKKTSKKKQQASSDNSDSDSDGESKNKKTSKKKKQQASSDNSDSDSG
GESKNKKTSKKKKQQASSDNSDSDSGGESKNKKMSKKKKKQASSDNSDSDSGGESKNKKM
SKKKKKQAGSDNSDSDSDVESRSKAVTARRRSSRVKKQENSKGSGKDLSDKKQKRSYEKK
RKGRSPKAASKLQSSSEEEEEEEEEAGGDSGEDSDQQKIKPIVEDNVLGGSGVFNQSSGD
EVDTKDDSQVFEDDDDDPENRIAKKMLLAQIKSSYSSGAESSSDNEEEDAXKKSSKKAKK
GKEDDEEEQDNEFTEDSESDVDVKKRGSRHKLLRHKLSLSEGESGDSSKEKKSKGSKKKS
SRKVGSDDSEDSDFEKSASGSASGMSEEVSDSEVDSKRRKTRSAKKKEDENQRSYKQQKK
KRRRIKVQDDSSSNNEKSGEEDGEDGEGRKGRKKIRKILKDDNLRTETRDALKEEEDRRK
RIAEREALREKLREVVVVEEASQVACPITTKLVLDEDEETKEPLVQVHKSLVTKLKPHQV
DGVQFMWDCCCESMKKIQKSAGSGCILAHCMGLGKTLQVVAFLHTLLLCEKLDFSTALVV
CPLNTVLNWLNEFEKWQVGLKDEESLEVTELATVKRPQERAYALQQWQESGGVMIIGYEM
YRNLTQGRNIKSKKLKETFQKTLVDPGPDLVICDEGHILKNEASAVSKAMNSIRTRRRIV
LTGTPLQNNLIEYHCMVNFIKENLLGSVKEFRNRFINPIQNGQCADSTLHDVRIMKKRAH
ILYEMLAGCVQRKDYSALTKFLPPKHEYVLSIRMTPLQCKLYRHYLEHFTGVGNALEGGR
GRAGTKLFQDFQMLSRIWTHPWCLQLDYISKENRGYFDEDSMDEFIASETEESSMSLTSE
DEKAKKKKKQGKGRKKGSDDSDSDEVEVIKEWNSSSRGRNGEGRSQPEPVEEPARAANST
PGSPCSADWYKEFVTEADAEILEHSGKMTLLFEILRMAEETEDKVLVFSQSLISLDLIED
FLELSCRTEEDEKLSPYKGEGKWFRNIDYYRLDGSTNAPTRKRWAEDFNDTSNTRGRLFL
ISTRAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQVKPVYVYRFLAQGTMEEK
IYERQVTKQSLSYRVVDQQQIERHFTMNELAELYTFDPDMLDDPSEKKSKRATPMLPKDP
LLAEMLQNNKDQLVCYHEHDSLLDHKEEEALSEEDRKAAWAEYEAEKKGLSMRTNYASNY
AQPDMGTSNYFSFNMAALATMSNQQLEDLINQGRQKVIEATNALKALARESMEDIIARIW
KDNPTLTESQVQALSLRHQATVEMELKRREGIYREVLNRQQTLMVYVQKLITNRKVQEQQ
LAMANQATYLNQLALQNGMMAGGMSQMNLLGLYQRLHGMGGNQGGGKNPGPSQGM
NT seq
6648 nt
NT seq
+upstream
nt +downstream
nt
atgagtctggcttcttccgaatcaaacctagatcaaatgggagagaaaggagaggagcct
gggagctcatcagaaagcatgaaaccgtcttcttctcgaagcaggaggaagcccaccaat
gtaacaaagcacacagaacagaaagactctgacgcctcgactaacagcgaaaacgaagga
gccacttctgacagtaacacaggcagcggatctaaaggcactttagtgataaaaccgagt
gggaatgaaagcaaaggtgccatgaagctcagagtggatttcaaacagaaaaaaacagat
gataccctggagaagaaagttaactgcacagcctgcggaaaacaagtaaaccaatttcag
cgcaactctgtgtacgagcatcctatgctcaaagtactcatttgcaagtcatgtttcaaa
tactacacaagcgatgacatcggccgggattctgatgggatggatgagcaatgcagatgg
tgtgctgagggtggaaagctaatctgctgtgactactgcaacaacgctttctgcaagaag
tgcatactgcgcaacctgggcaggaaggaactgtccaacatcacggatgagaactccaag
tggcactgctacgtgtgccggtccgagcccctccaggatctggtctctaactgccacagc
atcatgcagagaaaagaggaagtggaaatgaagcaaagaaaaacagataaagctgaggag
cgtgaaggcaagaaagagaagaagaaatcccccaaggaacagaaagcaatcgcaaatggg
aaagaacacagtgaaggcttggggaccatgacgttctcctataaaaatctgcagataccc
aaagatctaatcaagaagacaaagaagcttgttgaaactacaactgggttaaataacact
ttcattcagttcatccagcaggcgaccgacgaccaggcagacgccaccatcaggtatcga
catttgaaagccttcaaggcggtgctctcagatctgaggaaagcccacaatgccttggaa
gaggctttgaagcctgagttcagaaacatggagctgcagaatggtaccgaagggcaacat
gtgagaaagactggcaatgttgtggaacctgcagaaaacaatgagatggattgttctgca
gattcacttcctggtgaggacggtgagcagcttaatgaagtcaagccaatttgtgacgca
gaagaaatgaaggagtctaagcagccgcctaatgagaatgattcagtctgtaaatctggc
aaaaccaaaaaggtgtcaaaggagcaggacagtataggagatttagttggtaagatggaa
acggttgaagagctgcctaacgaaatagaggtttcaagaaaagagtcgcccaaaaagccg
tcaaatgaaacagattcagttgatgaaacagaaacgatggacgaaggggtgaaagagttg
gataaccagcaggacatgaagtcagaagacgaagtgtccaataagcctgaaatggaagac
caccaaacagaaacaagcgtccccaaaaagacaattaagagcgaggtctttgacggtgag
ccagtgtctactgctgaaacgtccctggatcacgacattatgtctgttcctccttcagtt
cctgaggagcttttccagatggtggagagtctcgctgactcctccatgctctcacagact
gataccagttcagcgaaagacgtggatacaaagtcaaatgagcatcctccagaaactcaa
tgcccccaacccagagttaagaacctgatagtcaaactgactcctgtaccagttgtcaaa
agcagcagttctaggtcctctaggtcaaaggacaaagaaaacacagaacagtcgagcaag
agtaaggaaaaagacaaggataagaaagactctgattctagtagagcagaagaagctgat
agcccaccaccgacccgccgctccagtagggtgaagaccactcctttaaggaagcaagga
gaaaataaaggcaagaaggactcctctgagtcagaatctgacggagacagcaaggccagg
gtcaagctatcaaagaaacccagtaacactaaaaaagagaccaaacgttcagcaaaaaca
tcggaagactctgactcagacgaagttcctcctgttctactggagaaagctgcaacaggc
aacagcagcacggacgaggaacgggaaagcacgactaaaaagcgtctcttcaaatcagac
acgtcctcaaaggacgcagagacgctaaccaaacgcaaacggaagtccgaaagctcaggt
tcagatgcagagaataaagacaagaagacgtccaagaagaagaagaagaaacaagccagc
tcagacaactcgaactctgattcagatggagagagtaaaaacaagaaaacgtccaagaag
aagcagcaagccagctcagacaactcggactctgattcagatggagagagtaaaaacaag
aaaacgtccaagaagaagaagcagcaagccagctcagacaactcggactctgattcaggt
ggagagagtaaaaacaagaagacgtccaagaagaagaagcagcaagccagctcagacaac
tcggactctgattcaggtggagagagtaaaaacaagaagatgtccaagaagaagaagaaa
caagccagctcggacaactcggactctgattcaggtggagagagtaaaaacaagaagatg
tccaagaagaagaagaaacaagccggctcggacaactcggactctgactcagatgtggag
agtaggagcaaagcagtcactgctaggaggaggtctagccgcgtcaagaaacaggagaac
tccaagggcagtggaaaagacttgtctgataagaagcagaagcgatcttatgaaaagaag
cggaagggaaggagcccaaaagctgcctccaagctacaatcttcatctgaggaggaggag
gaggaagaggaggaggctggaggcgactccggagaggatagtgaccagcaaaagatcaaa
cccattgtggaggataatgtacttggaggcagtggagtcttcaatcagtcctcaggagac
gaggtagacactaaagacgattctcaagtttttgaagacgacgacgacgaccctgagaac
aggattgcaaagaaaatgcttcttgcacaaataaagtccagttactcttcaggagcagaa
agctcctctgacaacgaagaggaagacgcaaraaagaaatcctccaagaaagctaaaaaa
ggaaaagaggacgacgaagaggaacaagacaatgaatttacagaagactccgagtctgac
gtcgatgtgaagaagcgcggcagtcggcacaaattgctccgtcataagctctccttgagc
gagggtgaatctggagactcgagcaaggagaagaagagcaagggcagcaagaaaaagtct
tcacgtaaagttggcagcgacgactctgaagactcagactttgagaagtcagcgtctggt
tctgcgtcggggatgagtgaggaggtcagtgactcagaggtggacagcaagcgtcgaaag
accagatcagcaaagaagaaggaagatgagaatcagaggagctacaaacagcagaaaaag
aagcgacgcagaatcaaagttcaggacgactcctccagcaataacgagaagagcggagag
gaagatggtgaggatggagaggggcgcaaaggccggaaaaagatccgyaaaatcctcaag
gacgacaacttgaggacagagacgagagacgctctgaaggaggaagaggataggaggaaa
cgcatcgctgagagggaggcgctcagggagaaactcagagaggtggttgtagtagaagaa
gcctcccaggtggcctgccccatcaccaccaagctggtcctggatgaagacgaagagacc
aaggagccgctggttcaggtgcacaagagccttgtcacaaagctcaagcctcatcaggtc
gatggtgttcagtttatgtgggactgctgctgcgagtctatgaaaaagattcagaaatct
gcaggctctggctgcatcctggctcattgcatgggtctaggaaaaactctacaagtggtg
gcgttcctccacaccctgctgctctgtgaaaagctcgactttagcacagctctagtggtt
tgtcccctcaacactgttcttaactggctcaatgagtttgagaaatggcaggtgggactg
aaggatgaggagagcctcgaggtaacagagctagccacagttaagaggcctcaggagcga
gcctatgctctccagcagtggcaggagtcgggtggcgttatgatcataggttatgagatg
tacagaaatctgacgcagggacgaaacatcaagagcaagaagctaaaagagacgtttcag
aaaacgcttgtggatccaggtccagacttggtgatctgcgacgaaggccacattctgaag
aacgaggcttctgctgtctccaaagcaatgaactcgatcaggacgaggaggaggatcgtc
ctgactggaacacctctgcaaaacaacctcattgaataccactgcatggtgaacttcatc
aaggaaaacttgctcgggtcggtcaaggagttcagaaaccgcttcattaaccccattcag
aacggccagtgcgccgactcgacgctgcatgacgtccggattatgaagaagagggcgcac
atcctctacgagatgctggccggctgcgttcagaggaaagattactcggcgctcaccaag
ttcctgcctcccaaacacgagtatgtgctgtcgatcagaatgaccccgctccagtgcaaa
ctctacagacattacctggagcacttcacaggtgtggggaatgctctggaagggggccgg
ggccgagcgggaaccaaactcttccaggatttccagatgctcagcaggatctggacccat
ccctggtgccttcagctggactacatcagtaaagaaaacaggggttacttcgacgaagac
agtatggatgaattcattgcttcagaaactgaggaatcctccatgagtctgacctcggag
gatgagaaggcaaaaaagaaaaagaagcagggaaaagggaggaagaaaggttccgacgac
tcggacagtgacgaggtggaggtcatcaaggagtggaacagcagctctcgtggcaggaac
ggagaaggtcgaagccaacctgagcctgttgaagaaccagcccgggcagccaactccacg
ccagggagtccctgctctgccgactggtacaaggaatttgtgacagaagctgacgctgaa
atcctggagcactcaggaaagatgacgctgctctttgagatcctgcgcatggctgaggaa
acggaagataaagtgttggtgttcagtcagtcgctcatctctctggacctgatagaagat
tttctagaactttcctgcagaacagaggaggatgaaaaactttctccatacaaaggtgaa
ggaaaatggttcaggaacatcgactattaccgcctcgacggctccaccaacgcccccacc
aggaagaggtgggccgaggactttaatgacaccagtaacacgagggggcgtttgtttctt
atatccacccgagccggttctctcggcatcaacctggtggccgccaacagggtcatcatc
tttgacgcctcctggaatccctcgtacgacatccagagtatcttcagggtgtatcgcttt
ggccaggtcaaaccggtttacgtctacaggttccttgctcagggcacaatggaggagaag
atttatgaacggcaagtgaccaagcagtctctgtcgtacagagtagtggatcagcagcag
atcgagagacacttcaccatgaacgagctggctgagctctacaccttcgacccagacatg
ctggacgatccttcagagaagaagagcaagagagcaactccgatgcttccaaaggatccc
ctcctcgccgagatgctgcagaacaacaaggaccagcttgtgtgttatcacgaacacgac
tccctgctggaccacaaggaggaggaagccctcagcgaggaggaccgcaaggcggcctgg
gccgagtacgaagcagagaagaagggcctgtcgatgaggaccaactacgcttcgaactac
gctcagccagatatgggcacatctaactacttctccttcaatatggcagctttggccacc
atgtccaaccagcagctggaggacctcataaaccagggacggcagaaagtcattgaagca
acaaacgctttgaaagccttagctcgggagtcgatggaagacatcattgccagaatatgg
aaggacaacccaacgctcacagagagccaggtccaggcgctctcgctgaggcaccaagcc
accgtggagatggagctcaagcgcagggaaggcatttacagagaggtcctcaayaggcag
caaacgctgatggtgtatgtccagaagctgatcaccaacaggaaggtgcaggagcagcag
ctggccatggccaaccaggccacctacctgaaccagctggccctgcagaacggcatgatg
gcaggcgggatgagccaaatgaatctgctcgggctttaccagcgcctccacggcatgggt
ggcaatcaaggcggcggcaagaacccgggcccctcacagggcatgtag
DBGET
integrated database retrieval system
