Poecilia reticulata (guppy): 103471217
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Entry
103471217 CDS
T05149
Symbol
smarca5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103471217 (smarca5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pret03021
]
103471217 (smarca5)
03036 Chromosome and associated proteins [BR:
pret03036
]
103471217 (smarca5)
Transcription machinery [BR:
pret03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
103471217 (smarca5)
Chromosome and associated proteins [BR:
pret03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
103471217 (smarca5)
RSF complex
103471217 (smarca5)
WICH complex
103471217 (smarca5)
B-WICH complex
103471217 (smarca5)
NORC complex
103471217 (smarca5)
BRF complex
103471217 (smarca5)
NuRF complex (fruit fly)
103471217 (smarca5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
DBINO
Myb_DNA-binding
ERCC3_RAD25_C
AAA_14
Motif
Other DBs
NCBI-GeneID:
103471217
NCBI-ProteinID:
XP_008418292
UniProt:
A0A3P9QJH6
LinkDB
All DBs
Position
LG1:complement(30199470..30210755)
Genome browser
AA seq
1035 aa
AA seq
DB search
MSEGENCVEQREEPTELEEAGGAEEKSDSSDAGKESSSEGGADAQDASSSSSSKTKDSTP
GYEEKVQTDRTNRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRPRIKKDEKQNLLSA
GDNRHRRTEQEEDEELLNESTKTTNVCTRFDESPSYVKTGKMRDYQVRGLNWLISLYENG
INGILADEMGLGKTLQTIALLGYMKHYRNIPGPHMVLVPKSTLYNWMNEFKRWVPSLRAV
CLIGDRDQRTALIRDVLLPGEWDVCVTSYEMLIIEKAVFKKFNWRYLVIDEAHRIKNEKS
KLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDSWFDTNNCLGDQ
KLVERLHTVLRPFLLRRIKADVEKTLLPKKEIKIYVGLSKMQREWYTKILMKDIDILNSA
GKMDKMRLLNVLMQLRKCCNHPYLFDGAEPGPPYTTDLHLVVNGGKMVVLDKLLPKMKEQ
GSRVLIFSQMTRMLDILEDYCMWKNYEYCRLDGQTPHEERQVSINAYNEPNSTKFIFMLS
TRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQQKQVRVYRFITENTVEERIV
ERAEMKLRLDSIVIQQGRLVDPSANKLGKDEMLSIIRHGATHVFASKESEITDDDIDAIL
ERGERKTMEMKEKLSSLGESSLRNFTMDTENTSVYTFEGEDYREKKKVITNWIEPPKRER
KANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILFYRKTIGY
KVPRNPDIPNSAQVQKEEQAKIDEAEALTEEELEEKENLLQQGFTIWSKRDFNQFIKANE
KWGRDDIENIAREVEGKTPEEVMEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIK
KALDSKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKESVYDELRQCIR
NSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEREKAEKKKRGPKSGSAQKRKA
EGTPDGRGRRKKLKL
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaggcgaaaactgcgttgaacagcgggaagaaccaactgaacttgaagaagcc
ggaggagcggaggaaaaatcagactcttcagatgctggaaaagaatcctcatcagaaggt
ggcgctgatgcacaagatgcatcctcctcttcatcatctaagactaaagattccactccg
ggttatgaggagaaagtgcaaactgaccgaaccaacaggtttgaatatctgttaaagcaa
acggagctgtttgcacatttcatccaaccggctgcacagaagacccccacctccccgctg
aagatgaagccaggccgtccccggatcaagaaagacgagaagcagaacctgctctctgcc
ggagacaaccggcaccgccgcaccgagcaagaggaggacgaagagctactcaacgagagc
acaaagaccaccaacgtgtgcactcgctttgatgagtctccctcctatgtgaaaacagga
aaaatgagggactaccaggtccgtggtctgaactggctcatttctctgtatgaaaatgga
atcaacggcatcctggcagatgagatgggactggggaagaccctccagaccatcgccctg
ctgggctacatgaaacactacagaaacatcccaggtcctcacatggtgctggtcccyaag
tccactctgtacaactggatgaacgagttcaaacgatgggtcccctctctgcgcgccgtc
tgcctgatcggagatcgggatcagcgtaccgccctgatcagagacgtcctgctgccagga
gagtgggacgtctgcgtcacgtcttacgaaatgctcatcatagaaaaggccgtgtttaag
aagttcaactggaggtacctggtcatcgacgaagctcacaggatcaagaacgagaagtca
aagctgtcagaaattgtgcgtgaatttaaaaccaccaaccggctgctcctgactggaacg
ccgcttcagaacaacctgcatgagctctgggctctgctcaacttcctgctgcctgacgtc
ttcaactcatcggaggatttcgactcatggtttgacacaaacaactgcttgggtgaccag
aagctggttgaacgtcttcacactgtgctgcgtcctttcttgcttcgtcgtatcaaagcg
gatgtcgagaaaactttgcttcccaaaaaagagatcaagatttacgtgggtctgagtaaa
atgcagcgcgagtggtacacaaagattctcatgaaggacatcgacatcctgaactctgcg
ggcaaaatggacaaaatgcgtctgctgaacgtcctcatgcagctgaggaaatgctgcaac
catccgtacctgtttgacggggcggagcccggcccgccctacaccaccgacctccacctg
gtggtgaacggcggcaaaatggtggtgctggacaagctgctgcccaaaatgaaggagcag
ggctcycgtgtkctcatcttcagtcagatgaccaggatgctggacatcttggaggactac
tgcatgtggaagaactacgagtattgccgtctggacggacaaacgccacacgaagaaaga
caggtctccatcaacgcctacaacgagccaaacagcacaaagttcatcttcatgttgagc
accagggccggcggtctgggcatcaacctggctaccgccgacgtagtcattctctacgac
tcggactggaacccccaagtcgacctgcaggcgatggatcgagctcacagaatcggtcag
cagaagcaggtgcgtgtttaccgtttcatcacggaaaacaccgtggaggagaggattgtg
gagagggccgagatgaagctgcgcctggactccatcgtcatccagcagggaagacttgtg
gatccaagtgcgaacaagctgggtaaagacgagatgttgtccatcatccggcacggtgcc
acacacgtgtttgcttccaaagagagcgagatcacagacgatgacattgatgcgatcctg
gagcgcggagaaagaaagaccatggagatgaaagagaagctgtcatctctgggtgaaagc
tcactgaggaacttcaccatggacaccgagaacaccagcgtgtacacattcgaaggagag
gactacagagagaagaaaaaggttatcaccaactggattgagcctcccaaaagagaacgg
aaagccaattacgccgtagatgcatatttcagggaagctctgcgagtcagtgagcccaaa
gcacccaaggctcctcgtccgccgaagcagccaaacgtccaggacttccagttcttccct
ccacgcctgtttgagcttctggagaaggagatcctgttctacagaaagaccatcggatac
aaggttccacgtaatcccgacatccccaactcggcccaggtccaaaaagaagagcaggcc
aagatcgacgaggccgaagctctgactgaggaggagctggaggagaaggagaatctactg
cagcagggattcacaatttggagtaaacgagacttcaaccagttcattaaagccaacgag
aaatggggaagagaygatatcgagaacatcgccagagaagtcgagggaaaaacacctgaa
gaagttatggaatattctgccgttttctgggagcgctgcaacgagttacaggatatcgaa
aagatcatggcccagatcgagagaggagaagccagaattcagagaaggatcagcatcaag
aaagctctggactcgaagatcggacgctacaaggctcccttccatcagctccgcatctcc
tacggcaccaacaagggcaagaactacacggaggaggaagaccgcttcctcatctgcatg
ctgcacaagctgggcttcgacaaggagagcgtctacgacgagctccgccagtgcatccgc
aactcgcctcagttccgctttgactggttcctcaaatccaggacagccatggagctgcag
aggcgatgcaacactctgatcacgctgatagagagagagaacatggagctggaggagaga
gagaaggctgagaaaaagaagaggggaccaaagagcggctcagcgcagaaacgtaaagca
gaggggacccccgacggccgaggacgcaggaagaagctcaagttgtga
DBGET
integrated database retrieval system
