Poecilia reticulata (guppy): 103471222
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Entry
103471222 CDS
T05149
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM isoform X1
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pret04121
]
103471222 (rlim)
Enzymes [BR:
pret01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103471222 (rlim)
Ubiquitin system [BR:
pret04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103471222 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
103471222
NCBI-ProteinID:
XP_008418294
LinkDB
All DBs
Position
LG10:complement(26730690..26739414)
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AA seq
675 aa
AA seq
DB search
MEGSDSVEQGGGDQPESQRRRQLDRLDREEAFYQFVNNLSDEDYRLMRDNNLLGNPGEVT
EDELFNRLQQIKDGPEQPQNNNPSTENTEDPVETPESSEDSQGGDSLLDWLNTVRRTGNT
TRTGHRGNQSWRAVSQTNPNSGDFRFSLEISVNRNLAEQQAAAEGEQGPSEGPSEGPSEG
PSEGPSEQAPAGQEEEEVTDPEPQVPMETEVVEEPVVEELAVIVEPEPEETPEEEVASQE
AVEEPPSPPPAPPPAPVVEEVSPEQPPPCSSPRRGQRRPRSRSPEPRRTRARLARSRSPL
RLDQLDDLPGPRHTYGSQSPSSSTDTPPVPQVEGSSRTRQHILSRQSPLDDNVQPPSVEV
ESVPEAQNVRPQEGEPNGNEGGSAERRPPTIMLDLQVRRVRPGEYRQRDSIASRTRSRSQ
NSNNTFLYESERGGFRRTFSRSERAGVRTYVSTIRIPIRRISDAGLGEATSMALQSMIRQ
IMTGFGELGYLMDSDSDSSDSNRGTGTPADTESLNNPDASNADASAADEQPSVAAAAGVR
ERTVETDADEGLTTGPQASGGRARPRPPISLEEPSSLPFLRLAHFFLLNDDDDDQPQGLT
KEQIDNLSMRNFGESDALKTCSVCITEYAEGNKLRKLPCSHEYHVHCIDRWLSENSTCPI
CRRAVLVSANRESVI
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggaagggtctgacagcgtagagcaaggtggcggtgaccagccagagtcgcagcgccga
aggcagttggatcgtctagaccgggaagaggccttttatcaatttgtcaacaatctcagt
gatgaggactatcgtcttatgcgagacaacaacctcttgggcaatccaggggaggtaact
gaggatgagctgttcaatagacttcaacaaatcaaagatggtccagagcagccacagaat
aacaacccaagcacagaaaatactgaggatcccgtcgaaactccagagagctctgaggat
tcccaaggtggggatagcttgcttgactggctcaacacagtgagacgaaccggcaacaca
actagaactggacatcgtggaaaccagtcgtggcgagctgtgagccagaccaacccaaac
agtggagactttcgctttagcttggagatcagtgtgaaccgcaacctggccgaacagcag
gccgctgctgaaggagaacaggggccttcagaggggccttcagaggggccttcagagggg
ccttcagaggggccttcagagcaggccccagcgggtcaagaggaagaagaggttacagat
cctgaaccacaggttcctatggaaacagaggttgtggaagaaccagtcgttgaagagtta
gctgtcattgttgagccagaacctgaagaaacacctgaagaagaggttgcctcacaagaa
gctgtcgaggaacctcccagtccacccccagctccacctccagctccagtcgtagaagaa
gtttcaccggagcaacccccaccttgttcttctccacgaaggggacaaaggagaccccgc
agccgtagcccagaaccacgcaggaccagagcccgcttagccagaagccgttcacctctc
cgtttggatcaactagatgacctacctggtccgcgacacacctacggctctcagagcccc
agttcttccactgacacacctccagtgcctcaagtggagggcagttctcggactcgacaa
catattctctccaggcaaagcccattagacgacaatgttcaaccacccagtgttgaagta
gaatcagtcccagaagcccagaatgttagacctcaggaaggagaacccaacgggaatgaa
ggaggttcggcggaacgccgtcccccgactataatgctcgaccttcaggtgcgtcgtgtg
cgtccaggtgaatatcggcaaagagacagcatcgccagccgtacccggtcacgctcgcag
aactccaacaacacttttctctatgagagtgagcgggggggttttcgcaggaccttctcg
cgctccgagcgtgccggagtgaggacctacgtcagcaccattcgaatccccattcgcagg
atctccgacgcagggttaggagaggcgacgtcgatggctctccagtctatgataaggcag
atcatgacgggcttcggcgagctaggctacctcatggactccgactcagattcctcagat
tcaaaccgcggtaccgggacacccgccgatacggaatccctcaataatccagatgctagt
aacgctgacgcgtctgctgctgatgagcaaccatcggttgctgctgctgctggagttaga
gagaggacagttgagacagatgcggatgagggtcttactactggcccacaggcttctggt
ggaagggctcgacctagaccccccatcagcctagaggagcccagctcgctgcccttctta
cgacttgctcacttcttcctcctgaatgacgacgacgatgaccagcctcaggggctgacc
aaagaacagattgataacctctccatgcgcaactttggtgagagcgacgccttgaaaacc
tgtagcgtctgtataacggagtacgccgaggggaacaagttacgcaagcttccctgctct
catgagtaccacgtgcactgcatagaccgctggctctctgagaactccacctgccccatc
tgtcgcagggctgtcctggtatcagccaaccgagagagcgtgatctaa
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