Poecilia reticulata (guppy): 103471271
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Entry
103471271 CDS
T05149
Symbol
rbm22
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103471271 (rbm22)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pret03041
]
103471271 (rbm22)
Spliceosome [BR:
pret03041
]
Complex B
Other components
Prp19-related factors
103471271 (rbm22)
Complex C
103471271 (rbm22)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
Torus
Nup35_RRM_2
zf-CCCH_2
RRM_occluded
zf-CCCH
RRM_3
zf-CCCH_4
RRM_YTH1
zf-CCCH_10
zf-CCCH_12
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
103471271
NCBI-ProteinID:
XP_008418374
UniProt:
A0A3P9N697
LinkDB
All DBs
Position
LG10:25617559..25624227
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AA seq
426 aa
AA seq
DB search
MATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
TRMRFKKTEVCQTCSKMKNVCQTCLLDLEYGLPIQVRDTGLTVKDEIPRSDVNKEYYTQN
MEREIANSEGTRPVGQLGKAPSSSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKSISTLYIGGLG
DTVTDGDLKGHFYQFGEIRTITIVQRQQCAFIQFATRQAAEMAAEKSFNKLIINGRRLTV
KWGRSQAARGKDGKEGVSEMGTRLDPVPGLPGALPPPPALDEEAPANYFNLDPSSSPAIM
NIALPPPPGINPPPPGYGPPMFHPMGPMAPPVPPPMTMRPPGTIHYPSQDPQRMGAHSAH
GSRHTE
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctccctaggctctaacacctacaacaggcagaactgggaagacgcggatttc
ccaattctgtgccagacatgtttaggggagaatccttacatccgtatgaccaaggagaaa
tatgggaaagaatgcaagatctgtgctcggcccttcaccgtgttcagatggtgcccgggc
acacggatgcgttttaagaagacggaggtctgtcagacctgcagtaaaatgaagaacgtt
tgtcagacatgccttcttgacctggagtatggtttgcctatccaggtcagagacaccggc
ctcactgttaaagacgagattcccaggtctgatgtgaacaaagagtactacacacagaac
atggagagagagatagccaattctgaaggcactcgaccggtaggccagcttggtaaggct
ccaagctccagcgacatgttgctcaaattggcccgaactacgccgtattacaagaggaat
cggcctcatatttgctccttctgggtgaagggggagtgtaagagaggagaagagtgtccc
tacaggcacgagaagcctacagatcctgatgaccctctggctgaccagaacattaaagat
cgttactacggcatcaatgacccagttgctgacaagttattgaagcgggcttcaactatg
ccccgactggacccaccagaggacaaatccattagcactctttacataggcggcctggga
gatacagtaacagacggagatctcaagggtcacttctaccaatttggagaaattcgcacc
attactatagtccaaaggcagcagtgtgccttcatccaattcgccactcggcaggcagca
gagatggctgcagaaaagtcctttaacaaactaatcattaatggacggaggctcactgtc
aagtggggaaggtctcaggcagccagaggaaaggatggaaaggagggagtgagtgaaatg
ggaaccagactggatcctgtacctggcctgccgggagcacttcctccaccaccagctctc
gatgaagaggctccagcaaactacttcaacctcgacccgagctcctcacctgccatcatg
aacattgctttaccgccacctccaggcatcaacccccctccaccaggttacggccctccg
atgtttcaccccatgggtcccatggccccacctgtcccccctcccatgacaatgagaccc
cctggtacaatccattacccgtcccaggatccccagcgcatgggtgcccactcggcacac
ggctcacgccacaccgaatag
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