KEGG   Poecilia reticulata (guppy): 103471271
Entry
103471271         CDS       T05149                                 
Symbol
rbm22
Name
(RefSeq) pre-mRNA-splicing factor RBM22
  KO
K12872  pre-mRNA-splicing factor RBM22/SLT11
Organism
pret  Poecilia reticulata (guppy)
Pathway
pret03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pret00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103471271 (rbm22)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pret03041]
    103471271 (rbm22)
Spliceosome [BR:pret03041]
 Complex B
  Other components
   Prp19-related factors
    103471271 (rbm22)
 Complex C
    103471271 (rbm22)
SSDB
Motif
Pfam: STL11_N zf-CCCH_RBM22 RRM_1 zf_CCCH_4 Torus Nup35_RRM_2 zf-CCCH_2 RRM_occluded zf-CCCH RRM_3 zf-CCCH_4 RRM_YTH1 zf-CCCH_10 zf-CCCH_12 zf-CCCH_PARP12
Other DBs
NCBI-GeneID: 103471271
NCBI-ProteinID: XP_008418374
UniProt: A0A3P9N697
LinkDB
Position
LG10:25617559..25624227
AA seq 426 aa
MATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
TRMRFKKTEVCQTCSKMKNVCQTCLLDLEYGLPIQVRDTGLTVKDEIPRSDVNKEYYTQN
MEREIANSEGTRPVGQLGKAPSSSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKSISTLYIGGLG
DTVTDGDLKGHFYQFGEIRTITIVQRQQCAFIQFATRQAAEMAAEKSFNKLIINGRRLTV
KWGRSQAARGKDGKEGVSEMGTRLDPVPGLPGALPPPPALDEEAPANYFNLDPSSSPAIM
NIALPPPPGINPPPPGYGPPMFHPMGPMAPPVPPPMTMRPPGTIHYPSQDPQRMGAHSAH
GSRHTE
NT seq 1281 nt   +upstreamnt  +downstreamnt
atggcgacctccctaggctctaacacctacaacaggcagaactgggaagacgcggatttc
ccaattctgtgccagacatgtttaggggagaatccttacatccgtatgaccaaggagaaa
tatgggaaagaatgcaagatctgtgctcggcccttcaccgtgttcagatggtgcccgggc
acacggatgcgttttaagaagacggaggtctgtcagacctgcagtaaaatgaagaacgtt
tgtcagacatgccttcttgacctggagtatggtttgcctatccaggtcagagacaccggc
ctcactgttaaagacgagattcccaggtctgatgtgaacaaagagtactacacacagaac
atggagagagagatagccaattctgaaggcactcgaccggtaggccagcttggtaaggct
ccaagctccagcgacatgttgctcaaattggcccgaactacgccgtattacaagaggaat
cggcctcatatttgctccttctgggtgaagggggagtgtaagagaggagaagagtgtccc
tacaggcacgagaagcctacagatcctgatgaccctctggctgaccagaacattaaagat
cgttactacggcatcaatgacccagttgctgacaagttattgaagcgggcttcaactatg
ccccgactggacccaccagaggacaaatccattagcactctttacataggcggcctggga
gatacagtaacagacggagatctcaagggtcacttctaccaatttggagaaattcgcacc
attactatagtccaaaggcagcagtgtgccttcatccaattcgccactcggcaggcagca
gagatggctgcagaaaagtcctttaacaaactaatcattaatggacggaggctcactgtc
aagtggggaaggtctcaggcagccagaggaaaggatggaaaggagggagtgagtgaaatg
ggaaccagactggatcctgtacctggcctgccgggagcacttcctccaccaccagctctc
gatgaagaggctccagcaaactacttcaacctcgacccgagctcctcacctgccatcatg
aacattgctttaccgccacctccaggcatcaacccccctccaccaggttacggccctccg
atgtttcaccccatgggtcccatggccccacctgtcccccctcccatgacaatgagaccc
cctggtacaatccattacccgtcccaggatccccagcgcatgggtgcccactcggcacac
ggctcacgccacaccgaatag

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