Poecilia reticulata (guppy): 103471328
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Entry
103471328 CDS
T05149
Name
(RefSeq) protocadherin-10-like isoform X1
KO
K16499
protocadherin delta 2
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pret04515
]
103471328
Cell adhesion molecules [BR:
pret04515
]
Cadherins
Protocadherins
103471328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
103471328
NCBI-ProteinID:
XP_008418467
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All DBs
Position
LG10:complement(24639474..24646317)
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AA seq
1014 aa
AA seq
DB search
MERKLCRGCWVPVTGLVICLLLCACVVDLVLAQIRYSIPEELDHGAFVGNIAEDLGLDVA
KLSARRFRIVSGAKRQYLEVNLENGILFVNEKIDREELCERSPSCFLHLQVVIENPLELY
RVEVEILDVNDNSPSFPWTEFNLDITESAAPGSRFPLESAQDQDVGTNSLRSYQLSANQH
FVLNIQTRNDGSKFAELVLDTPLDREQQKRHEMVLTAFDGGSPERSGTALITVTVLDAND
NVPVFDRSVYRASLVENAPRGTLVLKLNATDLDEGSNGEVTYAFSGHAPLKVRELFSVDP
YMGEIRVKGVVDYEKASVYELYVQAKDRGPSAVAVHSKVLVDILDVNDNAPEVILTSVST
PVQEDASPGTVIAVISVMDRDSGENGNVDCQIPNNVPFQLHSSFKNYYTLVTSEPLDRET
VSEFNITLTARDLGSPSLSTRRTILVQVSDINDNPPRFSQPSYTVYVTENNAPGASICSV
SAFDPDSNQNAYLSYSILEGQIQGMPVSTYVSINSDNGNIYALRSFDYEQLRNFQILVQA
QDAGFPPLASNVTVNVFVLDQNDNAPVIVSPLPKNGSVATEVVPRSVDAGYLVTKITALD
ADAGQNSRLSYQVIQATDPGLFSVALYTGEIRSIRRLVEKDATRQRLVILIKDNGQPPLS
ATASIVLTVVDSVPESLSDFGDLTLSPKPPSNLALYLIVSLSTISLIFLVAIIVLAAVKC
YKDRETHSGYNLPPLACCCCGGFQPEPPPEVFKKSNLNLQISSASKVPTNCMEVNGNSSF
SQSYCYKACLTPESAKSDFMFLKPCSPSSTPRNNEAKNADNSWNAHSRSASVNNGATTPN
ELKQPNTDWTLTKTQNSSIKSYNSINMDGTLMRKAMHADPENYVTSMAPGQYWTWGTQMK
GMKDYKMSPSPGGIPSRPWTPRCTPPPQQQQQQQQQQPSIPSHPHPHPHPHPPPDYHHNV
YIPGTPSGFCTLRPTAQRSELDVHNSFSTFGKKRRLQMSPQGEAAVINNDLYND
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atggaacgtaaactctgcagaggctgctgggttccggtgactggtctggtcatatgtcta
ctgctgtgtgcgtgcgtggtggacctggtactcgcacaaattcggtactctatccccgag
gagctggatcacggagcatttgtgggcaacatcgcagaagacctcggtctggatgtggcc
aagctttcagcgcgaaggtttcgcatcgtctccggcgcaaagagacagtatttagaagtg
aacttggagaacgggatcctctttgttaacgaaaagatagacagagaggagctgtgtgaa
agaagcccgagctgttttctacacctacaagttgtcatcgaaaacccgttagaactgtac
agagtggaagtggagattttagacgtcaacgacaactcccccagcttcccgtggactgag
ttcaatctcgacatcacagagtctgctgcgcccggctcacgcttccctttagagagcgca
caggaccaggacgtgggcaccaactctctgcgctcctaccagctgagcgcaaaccagcac
ttcgtgctcaacatccagacgcgcaacgatggcagcaagtttgccgagctggtgctggac
acgccgctcgacagggagcagcaaaaaaggcacgaaatggttcttactgcgtttgacggt
ggctcaccggaacgctctgggacagcgctaataactgtcaccgtgttagatgccaacgac
aacgtgcctgtctttgaccgctcggtttacagggcgagcttggtggaaaacgcacccagg
ggaacgctggtgctgaagttaaacgccacagacttggacgaaggctcaaatggggaagtt
acatatgcgtttagcgggcacgcacctcttaaggtgcgcgaattgttcagcgtggacccc
tatatgggggagatacgtgtgaagggcgttgtggactacgagaaagccagtgtgtatgaa
ctgtacgttcaagcaaaagacagaggaccgtcggctgtggcagtacacagtaaggttctg
gtggacatcctggatgtgaatgacaacgctcccgaagttatcctcacgtcagtgtccaca
cctgtccaggaggacgcgtcgcctggcacagtgatagctgtgatcagcgtcatggaccga
gattcgggagagaacgggaacgtggactgtcagattccgaataatgtcccctttcagctc
cattcatcttttaaaaactattacacgctggtgacaagcgagccgctggacagagagact
gtgtccgagttcaacatcacacttacggccagagacttgggctccccttcactctccacc
aggagaacaattctggttcaagtgtctgacataaacgacaaccccccgcggttctctcaa
ccttcatacacagtttatgtgaccgagaataacgccccgggcgcttccatttgctctgtc
tctgcgttcgacccagattctaaccagaacgcatatctgtcttattctattctggagggt
caaattcagggcatgcccgtgtccacttatgtctccatcaactccgacaacggcaacata
tacgcactgcgctctttcgattacgagcaacttagaaactttcagattctggtgcaggca
caggacgccggtttccctcctctcgccagcaatgtcacggtcaacgtgtttgttctggac
cagaatgacaacgcgcctgtcattgtgtccccgctgcccaagaacggctccgttgccacg
gaggtggttccgcgctctgtggacgcggggtatttggttaccaaaatcaccgcgttagac
gcagacgcggggcaaaactcccggctgtcttaccaggttattcaggcgactgacccgggc
ttgttcagcgtggctctatatacaggcgaaatcaggagcattcgccgattagttgagaaa
gacgcaacaagacaaaggttggtaatattaatcaaggacaacgggcagccgccgctctcc
gccacagcctctattgtcctcacagttgtagacagcgtgcctgagtcgctgtcagatttc
ggagatctaacgctcagcccgaaacccccctcaaacctcgccttgtatctcatcgtgtca
ctcagcacaatatctttaatattcttggtggctatcatagtgctggctgctgttaagtgc
tacaaggacagggagacccacagcggttacaacctgccccccttagcctgctgctgctgc
ggggggtttcagccagagccgcccccggaggtgttcaaaaaatccaacctcaacttgcag
atttcatccgcgtccaaagtacctacgaactgcatggaggtgaatggaaatagcagtttt
tctcagtcatattgttataaagcctgtctgacccccgagtcagccaaaagtgactttatg
tttctgaagccgtgcagcccgagcagcacgccgaggaacaacgaggcgaagaacgcggac
aactcgtggaacgcgcacagccggagcgcgtctgtgaacaacggagctacaactccgaac
gagctgaagcagccaaacacagactggactctcacaaagacccagaactcttccatcaaa
agttacaactctatcaatatggatggtactctcatgcgtaaggcaatgcatgcagaccca
gagaactatgtcacttcaatggcacctggacaatactggacttggggaactcaaatgaag
ggcatgaaagactacaaaatgtctccatcacctggtggaattccttctcggccctggact
cctcgatgtacgcctcctccacagcagcagcagcagcagcagcagcagcagccatcgatt
ccctcacatccacacccacatccacatccacacccaccgcccgactatcaccacaacgta
tacattcccggaactccgtcgggcttctgcaccctgcggccaacagcgcagcgaagtgaa
ctggatgtccacaattctttctccacgtttggcaagaaacggcgtcttcagatgtctccg
caaggggaagccgcagtgataaataatgatctgtacaacgactga
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