Poecilia reticulata (guppy): 103471424
Help
Entry
103471424 CDS
T05149
Name
(RefSeq) pre-mRNA-processing factor 39-like
KO
K13217
pre-mRNA-processing factor 39
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pret03041
]
103471424
Spliceosome [BR:
pret03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
103471424
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_19
HrpB1_HrpK
UTP6_C
TPR_16
TPR_11
TPR_12
TPR_2
HAT
Motif
Other DBs
NCBI-GeneID:
103471424
NCBI-ProteinID:
XP_008418636
UniProt:
A0A3P9PNF3
LinkDB
All DBs
Position
LG10:21686265..21694529
Genome browser
AA seq
721 aa
AA seq
DB search
MAAEGCEEMSGNGVPEESSAMDVTEAAPPPPEASEENGGAAAAPEDPADPDNYSTALAAA
SEQGDLPADFERLWKAAHDNPQDFPCWTDLLQYCEHEGHAAAYRRALEAFLVRYPLCYGY
WKKFVDLERRGGDNNKAEEVCIRGLQAIPLSVDLWIHYINLLLGTLDMNLPDSAVRIRSV
FENAVASCGLDFHSDRLWDLYVEWEKEHGNVKNAAAVLDRALRVPTQLYSTHYDKFKVHL
NNNPPKDVLPSEEYEELRATCRQSQKAKRAEQAQEADEERPPGEEEPAMPEGTDSEELMQ
KIRDQVLLRRDKVYQDNEEEVRKRWNYEDAIKRPYFHVRPLDRLQLRAWHTYLDWEIAEL
NKDATESSQDPNQESTEESEVTTQRQEASDDAPAVQSDHRVRILFERCLIACALYEEFWT
RYIQYLEPQSVQETRAVYRRACRVHLPNKPNIHMQWATFEERHGDLNEARRVLEALEKAR
PGLAVVRIRRAALERRAGRLDQSEALLREAVAESKERPTLHAFYSIKLARLLLKVARNPD
GARTALQEALEISPDNDKLHLNLLDLESSAEPGASDEAVQECVTRALAAPLTPQTKLLLS
QRGLQFTEEYSNSIKSVLSVYEAHQKLLDELGGTKREAENGDEEPEKTSKTDDSSSAAAP
ASSTSHVPITTPPPPVMAADPSAQAGYGAYSSWYQQPQYSGYGGYGYQNAWNYNQSYYPP
S
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggaaggctgtgaagagatgagcggtaacggggtgcctgaagagtcttcagcc
atggatgtcaccgaggcagcgccgcctcctcctgaagcatcggaggaaaatggaggtgca
gctgcagcccctgaggatcctgcagacccagataactactccacggccctggcagcagcg
agcgaacagggggatctacctgcagactttgagcgtctgtggaaagccgcacatgacaat
cctcaggacttcccctgctggaccgatctgctccagtactgtgagcacgagggtcatgct
gccgcgtaccgcagagcgctggaagccttcctggttcggtatcctctctgctacggctac
tggaagaaatttgttgacctggaacgtcgaggtggcgacaacaacaaagcagaggaggtg
tgtattcgtggtcttcaagcaattcctctgagcgtagatctttggatccactacatcaat
ctgctgctgggaacgctggacatgaacctgcccgattcagctgttcggattcgcagtgtt
tttgagaatgccgttgcgtcgtgtggtttggatttccactcggaccgcctgtgggatctc
tacgtggagtgggagaaggagcacggaaacgtgaagaacgcagcggccgtcctggaccga
gctctcagagttcccactcagctctacagcacccactacgacaagttcaaagtgcatctt
aacaacaacccgcctaaagacgtgctcccctctgaggagtacgaggagctgagggcgacg
tgccggcagagccagaaggcaaagcgggccgaacaggcccaggaggcggacgaggagagg
ccgccaggagaggaggagcccgctatgcccgagggtaccgactcggaggagctgatgcag
aagatcagagaccaggttctgcttcgcagagacaaagtttaccaggacaacgaggaagaa
gtccggaagaggtggaactatgaagatgctatcaagcgtccatacttccacgtccggccg
ctggaccgcctccagctccgagcctggcacacctacctggactgggagatcgctgagctg
aacaaagacgccacagagtcctcacaagatccaaaccaggaatcgacggaggaatctgag
gtcacgacgcagcgtcaggaagcatcagatgatgctcccgccgtccagagcgaccacaga
gttcgcatcctgtttgagcgctgcctgatcgcctgcgctctgtacgaggagttctggacc
aggtacattcagtacctggagccgcagagtgtgcaggagacgcgggccgtctacaggcga
gcctgccgggtccacctgcccaacaaacccaacatccacatgcagtgggccacgtttgag
gagagacacggtgacctcaacgaggcccggcgggttctggaggccctggagaaagcccgg
cctggtctggccgtggttcgcatccgcagggcggccttagagcgccgagcgggccggctg
gaccagtcggaggctctgctgcgagaggcggtggctgaatccaaagagaggccgacgctg
cacgccttctactccatcaaactggcccgtctgctgctcaaagtggccagaaacccagat
ggcgcccgcacggctttacaggaagcgctggagattagtccggataatgacaagctgcac
ttgaacctgttggacctggagtcgtctgcggagccgggggcttcggacgaggcggtgcag
gagtgtgtgactcgggcgctggcggctccgctcaccccgcaaaccaagttactcctgtca
cagagaggcctccagttcacggaggagtacagcaactccattaagagcgtgctgtccgtc
tacgaggcgcatcagaagctgctggacgagctgggaggcacgaagagagaagcggagaac
ggggacgaggagccagagaaaactagcaaaacagacgacagctcttctgctgctgcgccg
gcatccagcacgtcacatgttcccatcaccacgccgccgcctcctgtgatggccgccgac
ccgagcgcccaggccggatacggagcgtacagcagctggtaccagcaaccgcagtacagc
ggctatggtggctacggctaccagaatgcctggaactacaaccagtcctactatccaccc
agttaa
DBGET
integrated database retrieval system
