Poecilia reticulata (guppy): 103471554
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Entry
103471554 CDS
T05149
Symbol
cul4b
Name
(RefSeq) cullin-4B
KO
K10609
cullin 4
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03420
Nucleotide excision repair
pret04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103471554 (cul4b)
09124 Replication and repair
03420 Nucleotide excision repair
103471554 (cul4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pret04121
]
103471554 (cul4b)
03400 DNA repair and recombination proteins [BR:
pret03400
]
103471554 (cul4b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pret04147
]
103471554 (cul4b)
Ubiquitin system [BR:
pret04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
103471554 (cul4b)
DNA repair and recombination proteins [BR:
pret03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
103471554 (cul4b)
TCR (transcription coupled repair) factors
Cul4-CSA complex
103471554 (cul4b)
Exosome [BR:
pret04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103471554 (cul4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
SecA_SW
PEX14-like_2nd
Motif
Other DBs
NCBI-GeneID:
103471554
NCBI-ProteinID:
XP_008418856
UniProt:
A0A3P9P7U4
LinkDB
All DBs
Position
LG10:16638391..16656171
Genome browser
AA seq
872 aa
AA seq
DB search
MFPTGLSSPNPPPPPTQEARPAATDVKSDSGNITSPKKRKINGSERDDTSDTISSSPPKT
LNSSSSSSSCSPTPPLHIQKKLRFEDSVDFIGLDVKMAEEAAAAAAAAAAAASCSNNKSK
AMFLAGGVGGHHANGLTKTAGSGTFSSSKPGAAKKLVIKNFREKPKLPENYTQETWQKLK
EAVEAIQNSTSIKYNLEELYQAVENLCSHKISAKLYKQLRTVCEDHIKAQIDQFREDALD
SVLFLKKIDKCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRFYIISDLK
VQSKTIDGILLLIERERNGEAIDRSLLRSLLSMLSDLQIYQDSFEQRFLEETNRLYAAEG
QRLMQEREVPEYLHHVNKRLEEEADRVITYLDQSTQKPLIATVEKQLLGEHLTAILQKGL
THLLDENRIQDLSLLYQLFSRVRGGVQVLLQQWIEYIKAFGSTIVINPEKDKTMVQELLD
FKDKVDHIIDICFLKNEKFVNAMKEAFETFINKRPNKPAELIAKHVDSKLRAGNKEATDE
ELEKMLDKIMIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAF
TSKLEGMFKDMELSKDIMVQFKQYMQCQNIPGNIELTVNILTMGYWPTYVPMEVHLPPEM
VRLQEIFKTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEE
FTLEEIKVATGIEDSELRRTLQSLACGKARVLTKIPKSKDVEDGDKFSCNDDFKHKLFRI
KINQIQMKETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLMSEVYNQLKFPV
KPADLKKRIESLIDRDYMERDKENSNQYNYVA
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgtttccaacaggtttatcttcccctaatcccccaccaccgccaacccaggaggctaga
cccgcggctactgatgtcaaaagcgacagtgggaacatcacatctccgaaaaagaggaaa
ataaacggctcagagagggacgacacgagtgacaccatctcctcctcgcctcccaagacg
ctcaattcctcctcctcctcttcctcctgctctcccactcctccgctgcacattcagaag
aagttgaggttcgaggattcggtggatttcattggactagatgtgaaaatggctgaggag
gctgccgccgccgccgccgccgccgccgctgctgcttcgtgctccaataacaaaagcaaa
gccatgttcctggccggtggcgtggggggacaccacgcgaacggactgacgaaaaccgca
gggtccggcaccttctccagcagcaaacccggtgctgccaagaaactagtcatcaagaac
ttcagagaaaaaccgaagttaccagaaaattacacgcaggagacctggcagaagctaaaa
gaagctgtggaggccattcagaacagcacttccatcaagtacaatctagaggagctctac
caggctgttgaaaacctctgctcccataagatatctgccaaactgtacaaacagctgagg
accgtgtgtgaagaccacatcaaggcacagatcgatcagttcagggaggatgccctggac
agcgtccttttcctgaagaaaatcgataagtgctggcaagatcactgcagacaaatgatc
atgattaggagtatatttctgtttttggatcgcacctatgttttacaaaattctatgctg
ccatcgatctgggacatgggcctggagctgttcaggttctacatcatcagcgacctgaag
gtccagagtaaaaccatcgacgggattctgctgctcatcgagagggaacgaaacggagaa
gccatcgaccgcagtctgctgaggagcctactgagcatgctctctgacctccagatttat
caagactcgtttgagcagcgctttttggaggaaactaatcgactttacgccgcagaggga
cagaggctgatgcaggagcgagaggtgccagaatatctccatcatgtcaacaaacgcctg
gaggaagaggcggacagagtaatcacatatctggaccaaagcacacaaaaaccgctcatt
gctactgtggagaagcagctgctgggcgaacatctcactgcgattctgcagaaagggttg
acccacctgctggacgagaaccggatccaggatctgtctctgctgtatcagctcttcagt
cgagttcgaggcggcgtccaggtgctgctgcagcagtggatagagtacatcaaggcgttt
ggaagcacaatcgtaatcaaccctgaaaaagacaaaacgatggttcaggagctgctggac
ttcaaggacaaggtggatcacatcatcgatatctgtttcctgaagaacgagaagttcgtc
aacgccatgaaggaggcttttgaaaccttcatcaacaagcggccgaacaagcctgcagag
ctcatcgccaaacacgttgattcgaagctgcgggcaggaaacaaagaggcgacagatgaa
gaactggagaagatgctggataagatcatgattatctttagatttatatatggaaaagac
gtatttgaggctttttacaaaaaggacctggccaagaggttgctggttggaaaaagtgcc
tcagtggatgctgaaaagtcaatgttgtcaaagctgaaacatgaatgtggagcggcgttc
accagcaaactagagggaatgttcaaagacatggagctctctaaagacattatggtgcag
ttcaaacagtacatgcagtgccaaaacattcccggcaacattgagctgaccgtcaacatc
ctcaccatgggatactggcccacctacgtccccatggaggtccacctgcctcctgagatg
gtgcgcctgcaggagatcttcaagacgttttacctgggcaaacacagcggcaggaagctg
cagtggcagtcgacgttaggtcactgcgtcttaaaagcagaatttaaagagggcaagaag
gagctgcaggtgtctcttttccaaacgctggtgctgctgatgtttaacgaaggcgaggag
ttcactctcgaagaaatcaaagtagctacaggaatagaggacagcgagctgcgtcggacg
ttgcagtcgctagcctgcggaaaagcacgagtcctcaccaaaatcccgaaaagcaaagac
gtagaggacggagacaagttttcctgcaacgatgacttcaaacacaaactcttcaggatc
aaaataaaccagattcagatgaaggagacggtggaggaacaagccagcaccacggaacgg
gtgtttcaggaccgtcagtaccagatcgatgcggccattgtgcggataatgaagatgagg
aagactctgagccataatctgttgatgtctgaggtttacaaccagctcaaatttcctgtc
aagcctgctgacctaaagaagaggatagagtctcttattgaccgggactatatggagcgc
gacaaggaaaactccaaccagtacaactatgtggcctag
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