KEGG   Poecilia reticulata (guppy): 103471793
Entry
103471793         CDS       T05149                                 
Symbol
rnf4
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
pret  Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:pret00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pret04121]
    103471793 (rnf4)
Enzymes [BR:pret01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     103471793 (rnf4)
Ubiquitin system [BR:pret04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    103471793 (rnf4)
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4_2 zf-RING_UBOX zf-C3HC4 zf-RING_5 zf-C3HC4_3 zf-RING_4 zf_RING_Vps8 zf-rbx1 Prok-RING_4 zf-C3HC4_4 Rtf2 zf-RING_6 TRAF3_RING zf-RING_10 zf-UDP zf-P11 zf-RING_11 PD-C2-AF1 zf-RING_16 zf-ANAPC11 Zn_ribbon_6 DZR IBR_1 zf-RING_Vps41
Other DBs
NCBI-GeneID: 103471793
NCBI-ProteinID: XP_008419210
LinkDB
Position
LG10:32257602..32266544
AA seq 187 aa
MSSSAQRKRRPAGSSLVSRTRTKTSRAASSRTRRAAGAGDPAPPTEPIDVMDGAEDGVEE
VVDLTCEGSESAVVDLTTTNESVLLVDEGPPGESYVLSSDEDEDAPTVVQAAITSTAHTS
RLTPGLISCPVCLDLYSEIVESGRLVVSTKCGHVFCSQCLRDALTSSHTCPTCRKRLTSR
QYHPLYI
NT seq 564 nt   +upstreamnt  +downstreamnt
atgagcagctcggctcagaggaagcggcggcccgctggaagctctctggtctccagaacc
agaaccaagaccagcagagcggccagcagtcggacccgcagggcggccggcgccggagac
cccgccccccccacggagcccatcgacgtgatggacggcgccgaggacggtgtggaggag
gtggtggacctcacctgcgagggatcagagtctgctgtggtcgacctgacgaccaccaac
gagtctgtgctgctggtggacgaagggcctccaggtgagagctatgttctcagcagtgat
gaagacgaagacgcgcccactgtcgttcaagctgccatcacctctactgcacacacatcc
aggttgactccgggtctcatcagctgtcccgtctgtctggacctgtactccgagatcgtg
gagagcgggcgattggtcgtctccaccaagtgcggtcacgtgttctgcagccagtgtctg
agggacgctctgacatcatcacacacctgccccacctgcaggaagaggctcacctcgcgc
cagtaccaccctctttacatctga

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