Poecilia reticulata (guppy): 103471798
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Entry
103471798 CDS
T05149
Symbol
polr2b
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03020
RNA polymerase
pret03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
103471798 (polr2b)
09124 Replication and repair
03420 Nucleotide excision repair
103471798 (polr2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pret03021
]
103471798 (polr2b)
03400 DNA repair and recombination proteins [BR:
pret03400
]
103471798 (polr2b)
Enzymes [BR:
pret01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
103471798 (polr2b)
Transcription machinery [BR:
pret03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
103471798 (polr2b)
DNA repair and recombination proteins [BR:
pret03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
103471798 (polr2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
103471798
NCBI-ProteinID:
XP_008419217
UniProt:
A0A3P9P3T4
LinkDB
All DBs
Position
LG10:32217040..32226031
Genome browser
AA seq
1174 aa
AA seq
DB search
MYDQDEDNQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHTSGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTIIKEGEEQLQTQHQKTFIGKIPIMLRSTYCLLSGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSMM
ARGGQGVKKSAIGQRIVSTLPYIRQEVPIIIVFRALGFVSDRDILEHIIYDFDDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKERRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEIRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDVKKAHQARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKRRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEIFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGEDVIIGKTVTLPENEDELDSTNRRYTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTVGHLIECLQGKVSANKGEIGDATPFNDAVNVQKVSNLLSEYGY
HLRGNEVLYNGFTGRKLTSQIFIGPTYYQRLKHMVDDKIHSRARGPVQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGLMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMTS
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaccaggacgaagataatcagtacgatgaagatgatgatgaaatcactcctgat
ctgtggcaggaagcctgttggatcgtcatcagctcttattttgacgagaagggcctggtg
cggcagcagctggactcgttcgatgagttcatccagatgtcggtccagcggatcgtggag
gacgctccgcccatcgacctgcaggccgaggcgcagcacacctcaggggaggtggaggag
ccgccacgctacctgctgaagttcgagcagatctacctgtccaagccgacccactgggag
cgggacggcgctccgtcccccatgatgcccaacgaggcccgcctccggaacctgacgtac
tcggcgccgctgtacgttgacatcactaagacgatcatcaaggagggagaggagcagctg
cagacgcagcatcagaagacattcatcggtaaaattcccatcatgctccgctccacctac
tgcctgctgagcggcctgaccgaccgcgacctgtgcgagctcaacgagtgtccgctggac
ccgggaggctacttcatcatcaacggctccgagaaggtgctgatcgcgcaggagaagatg
gccaccaacacggtctacgtcttcgccaagaaggactcgaagtacgcgtacacgggcgag
tgccggtcctgcctggagaactcgtcccggcccaccagcaccatctgggtcagcatgatg
gcccgcggaggacagggggtgaagaagagcgccatcgggcagcgcatcgtgtccacgctg
ccctacatcagacaggaagtgcccatcatcattgtgttccgggcgctgggcttcgtgtcc
gacagagacatcctggagcacatcatctacgacttcgatgacccggagatgatggagatg
gtgaagccgtcgctggacgaggcctttgtgatccaggagcagaacgtggcgctgaacttc
atcgggtccagaggcgccaagcccggcgtgacaaaggagcggcgcatcaagtacgccaag
gaagtcctgcagaaggagatgctgccgcacgtcggcgtcagcgacttctgcgagaccaag
aaggcctacttcctggggtacatggtccaccggctgctgctcgccgctctgggccggcgg
gagctggacgaccgggatcactatggcaacaagaggctggacctggccggaccgctgctg
gccttcctgttcagggggatgttcaagaacctcctgaaggagatccggatctacgcccag
aagttcatcgaccgagggaaggactttaacctggagctggccatcaagacgcggatcatc
tccgacgggctcaagtactcgctggccaccggcaactggggcgacgtcaagaaggcccac
caggcccgcgccggcgtgtcccaggtgctgaaccggctcaccttcgcctccacgctgtcc
cacctgcgccgggtcaactcccccatcggccgcgacggcaagctggccaagccgaggcag
ctgcacaacacgctgtggggcatggtgtgccccgccgagacgcccgagggccacgccgtg
ggtctggtgaagaacctggccctcatggcctacatctcggtcggctcccagccgtctccc
atcctggagttcctggaggagtggagcatggagaacctggaggagatttccccggctgcc
attgccgacgctacgaagatcttcgtgaacggctgctgggtggggatccacaaagacccg
gagcagctgatgaacacgctgaggaagctccgcaggcagatggacatcatcgtgtcagag
gtgtcgatgatccgagacatccgggagcgggagatccggatctacacggacgccgggcgg
atctgccgaccgctgctgatcgtggagaagcagaagctgctgctgaagagacggcacatc
gaccagctgaaggagcgagagtacaacaactacagctggcaggacctggtggcgagcggc
gtggtggagtacatcgacaccctggaggaggaaaccgtcatgctcgccatgacccctgac
gacctccaggagaagggcgtggcctactgctccacctacacccactgtgagatccacccg
tccatgatcctgggagtctgcgcctccatcatcccgttccccgaccacaaccagtctccc
aggaacacgtaccagtccgccatggggaagcaggccatgggcgtctacatcaccaacttc
cacgtgaggatggacacgctggcccacgtgctgtactacccgcagaagccgttggtcacc
acgcgctccatggagtacctgcgcttccgggagctgccagcaggaatcaactccatcgtc
gccatcgcctcctacacgggctacaaccaggaggactcggtcatcatgaaccgctcggcg
gtggaccgcggcttcttcaggtccgttttctaccggtcctacaaggagcaggagtccaag
aagggcttcgaccaggaggaaatcttcgagaagccgacccgcgagacgtgtcaggggatg
aggcacgccatctacgacaagctggacgacgacgggctgatcgcgccgggcgtccgcgtg
tccggggaggacgtgatcatcgggaagacggtgacgctgccggagaacgaggacgagctg
gacagcaccaaccggcgctacaccaagagggactgcagcaccttcctgcgcaccagcgag
accggcatcgtggaccaggtcatggtgacgctcaaccaggagggatacaagttctgcaag
atccgcgtccgttcggtccggatccctcagatcggagacaagttcgccagccgccacggg
cagaaggggacctgcgggatccagtaccggcaggaggacatgccgttcacctgtgaaggc
atcacacctgacatcatcatcaaccctcacgccatcccgtccagaatgacagtcggccat
cttatcgagtgtctgcaggggaaggtgtcggccaacaaaggtgagatcggcgacgccacg
ccgttcaacgacgccgtcaacgtgcagaaagtgtccaacctgctgtccgagtacggctac
cacctgagagggaacgaggttctgtacaacggcttcacggggaggaagctgacgtcccag
atcttcatcgggccgacctactaccagcggctgaagcacatggtggacgataagatccac
tcccgggcccgcgggccggtccagatcctgaaccgccagccgatggagggccgctcccgt
gacggcgggctgcgtttcggggagatggagcgggactgccagatcgcccacggcgccgcc
cagttcctccgggagcggctgttcgaggcgtccgacccgtaccaggtccacgtctgcaac
ctgtgcggcctgatggccatcgccaacacccggacgcacacctacgagtgtcggggctgc
cgcaacaagacgcagatctctctggtccggatgccgtacgcctgcaagctgctgttccag
gaactgatgtccatgagcatcgctcctcgaatgatgacctcatag
DBGET
integrated database retrieval system
