Poecilia reticulata (guppy): 103472086
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Entry
103472086 CDS
T05149
Symbol
trim71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pret03019
]
103472086 (trim71)
04121 Ubiquitin system [BR:
pret04121
]
103472086 (trim71)
Enzymes [BR:
pret01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103472086 (trim71)
Messenger RNA biogenesis [BR:
pret03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103472086 (trim71)
Ubiquitin system [BR:
pret04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
103472086 (trim71)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
Filamin
zf-B_box
DUF5128
SGL
ANCHR-like_BBOX
zf-RING_5
Ig_GEX2_N
zf-C3HC4
zf_RING_Vps8_fungal
Invasin_D3
Motif
Other DBs
NCBI-GeneID:
103472086
NCBI-ProteinID:
XP_008419685
UniProt:
A0A3P9PXF2
LinkDB
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Position
LG11:6357650..6401345
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AA seq
831 aa
AA seq
DB search
MASFPDSDLQTCPLCKELCGSSAPISSNSSTSSSSSQTSVSSNHATKKLHVLPCLHTFCR
QCLEGQRSPSDPLKLCCPTCDQKVSISEAGVDSLPSSNFLFSNLLDVVVSSDDQMQNKNG
HHHLGGLIGGSSGFHPSHGGLLHVQHMGEPQCSSCDEENPATSHCLDCEEYLCDNCVRAH
QRVRLTKDHYIDPLGESLHLSRVNSISSGTGQPGVSVSLAQSLQNNFALLSLFQGRMSFC
QNHDGEVFLFFCETCSVPICRECSVGRHIGHTYVYLQDAVQDCRAITIQLLADAQQGRQA
VQQSMEKVQAMAEQVEIKAKVVQTEVKALVLRHKKALEERECELLWKVDKIRQVKAKTLY
LQVEKLHQSLTKLDSTIAAVSQMLDEGHHLDVLLARERMLTQIHELKTLRGLMQPQDDDR
IMFTPPDQALYVAIQSMGLISSSAFAPVTKVHGEGLKNVLCGKPASFTVIGYDHDGEPCL
SGGDTVSAMVMSVADGSPSAVEVTDRKNGSYTVCFLPKMEGEHLVSVLVCHQHVQGSPFK
VTVKSRRNYRSLGSQMSSFGCEGEGDGQLCRPWGISVDREGYVVVADRSNNRIQIFKPCG
AFHHKFGSLGSRPGQFDRPAGVACDSQRRIIVADKDNHRVQVFTFEGQFLLKFGEKGTKN
GQFNYPWDVAVNSEGKILVSDTRNHRVQLFAPDGSFLNKYGFEGTLWKHFDSPRGVAFNH
EDHLVVTDFNNHRLLVIRPDCQAARFLGSEGTKDGQFLRPQGVAVDQENRIIVADSRNHR
IQVFEASGSFLCNFGSQGSGYGQMDRPSGVAVMPDGIIVVVDFGNNRILKF
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggcttctttcccagattctgacctgcagacctgtccgctctgtaaggagctgtgcggc
tcctccgctcccatctcctccaactcctctacctcgtcctcctcttcgcagacctctgtc
tcctctaaccacgccaccaagaagctccacgtcctgccctgcctgcacaccttctgcagg
cagtgtttggaggggcagcgcagccctagcgaccctctgaagctgtgttgccccacttgc
gaccagaaggtctccatctctgaggccggagtggactccctgccttcctccaacttcctc
ttcagcaacctgttggacgtggtggtgagctcggacgatcagatgcagaataagaacggt
caccatcacctcgggggcctgatcgggggctcgtccgggttccacccgtcacacgggggc
ctgctgcacgtgcagcacatgggggagcctcagtgcagctcctgcgacgaggagaacccg
gccacatcccactgcctcgactgcgaggagtacctctgtgacaactgcgtgcgagcgcac
cagcgggtgcggctgaccaaagaccactacatcgaccccctgggggagagcctccacctg
agccgggtcaactccatcagcagtggcactggccagccgggggtgtccgtgtccctcgcc
cagtccttgcagaacaactttgcgctgctgtctctgttccagggccggatgagcttctgc
cagaaccatgacggcgaggtgttcctgttcttctgtgaaacctgctcggtgccgatctgc
cgggagtgcagcgtgggccgtcacattggccacacctacgtctacctgcaggacgccgtg
caggactgcagggccatcaccatccagctgctggcagacgctcagcagggacgacaggct
gtccagcaaagcatggaaaaggtccaggccatggcggagcaggtggagatcaaggccaaa
gtggtgcagaccgaagtgaaggctctcgttctgagacacaagaaagctctggaggagagg
gagtgtgagctgctgtggaaggtggacaagatccgtcaggtgaaggccaagactctgtac
ctgcaggtggagaaactccaccagagtctgaccaagctggacagtaccattgctgctgtg
agccagatgctggatgagggccaccacctggacgtgcttctggccagggagagaatgctg
acccagatccatgaactcaagactctcagggggctgatgcagccacaagacgacgaccgc
atcatgttcacgcctccagaccaggctctgtacgtagccatccaatccatgggcctgatc
agcagcagcgcctttgcccccgtcaccaaagtccacggcgaaggtctgaaaaacgtactg
tgtgggaagcccgcgtccttcaccgtcatcggatacgaccatgacggcgagccgtgcttg
tccggcggtgacaccgtgtcagccatggtgatgtctgttgcagacggctctccgtccgcg
gtggaggtgacggatcgcaagaacggctcctatactgtctgcttcctgccgaaaatggag
ggggagcacctggtgtctgtgttggtgtgccatcagcacgtccagggcagccccttcaag
gtgacagtcaagtccagacggaattacaggtccctcggctcccagatgtcgtctttcggc
tgtgagggggagggggatggccagctgtgtcgcccctggggcatcagcgtggacagggaa
ggatatgttgtggtggcagaccgcagcaacaatcgcatacagatcttcaagccttgcggt
gccttccaccataagtttggctccttgggttctcggcctggtcagtttgatcgtccagcc
ggtgttgcctgtgacagtcagagacggatcattgtggccgataaggacaatcaccgtgtg
caggtgtttacgtttgagggccagttcctgctgaagtttggggaaaagggcaccaagaac
gggcagttcaactatccctgggacgtggccgtcaactctgagggtaaaatcttggtctcg
gacaccagaaaccaccgcgtgcagctctttgcccccgacggttctttcctcaacaagtac
ggcttcgaagggactctgtggaaacactttgactcccccagaggggtcgcctttaaccac
gaagaccacctcgttgtgaccgacttcaacaaccaccggctcctggtcatccggccggac
tgccaggcggctcgcttcttgggctcggagggcacaaaggacgggcagtttctacgcccc
cagggtgtcgccgtggaccaagagaaccgcatcatcgtggccgactcccgcaaccacagg
atccaagtgttcgaggccagcggaagctttttatgcaattttggctctcaggggagtggc
tacggacagatggaccgcccctccggggtggccgtgatgcccgacggaatcatcgtggtc
gttgactttggaaacaaccgcattctcaagttctaa
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