Poecilia reticulata (guppy): 103472172
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Entry
103472172 CDS
T05149
Symbol
col8a2
Name
(RefSeq) collagen alpha-2(VIII) chain
KO
K23455
collagen type VIII alpha
Organism
pret
Poecilia reticulata (guppy)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
Motif
Other DBs
NCBI-GeneID:
103472172
NCBI-ProteinID:
XP_008419832
UniProt:
A0A3P9QBT5
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Position
LG11:complement(9711319..9769228)
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AA seq
685 aa
AA seq
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MLVTMLLAPVCVLLMLGGRAFAGGYPPIPHVKYMQPMMKGPVGPPFREGKGHYVDMPPMM
KGEPGPQGKPGPRGPAGPPGLPGKPGLGKPGLNGQPGPQGPPGFTGIGKPGLPGLPGKIG
PNGMPGVNGEVGPRGEPGPRGLPGPPGVPGPAGLSLNGKPGLPGIRGPPGTRGEPGLKGI
SGPPGERGLKGENGNGKPGIPGIRGPPGLKGSTGPPGFPGIGKPGQKGLPGPPGLKGDEG
LPGNLGEPGQPGPPGLQGLPGPAGLGKPGLDGLPGTPGPVGPKGEQGTRGNPGTPGAPGY
GKPGLNGPKGEKGHGGFPGVPGDKGEQGIVGPIGVPGLDGQPGPQGIQGPMGLPGKHGMP
GLKGELGPKGPPGLPGLKGDQGPSGIPGRPGFPGEKGISGPNGSIGKPGPKGEPGQIGQP
GNPGLTGSPGPKGEGGFIGTPGPRGQSGIPGLQGPMGPMGPQGAPGPRGEAGLPGPPGLG
KLGDKGSMGPQGPPGKPGSSGLNGIPGPPGPPGPPGPPGNGQTVAAGVTDAGLGGEEVPG
DRKGPAYTQVLSASLAPAFTAILTTPFPPSALPIKFDRTLYNGQNAYSTSTGIFTAPLSG
VYYFAYHMHVKGTSLWVALYKNNVPATYTYDEYKKGYMDQASGSAVLELKEGDEVWVQMP
SDQANGLYSTEYIHSSFSGFLLCPT
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgctggtgaccatgctgttggctcctgtctgcgtgctgctgatgcttgggggccgtgct
tttgctggaggttacccacccatccctcacgtgaagtacatgcagcccatgatgaaagga
cctgttggacctccatttcgagagggcaagggacattatgttgatatgccacctatgatg
aaaggggaaccaggtcctcaagggaaacctggaccaagaggccctgctgggccaccagga
ttaccaggaaagcctggactgggaaaaccaggtctcaatggacaaccagggcctcaggga
cctccaggctttacaggaattggtaagcctggactcccaggtctcccaggaaagattggg
ccaaatggaatgccaggagttaatggtgaggttggacctcgtggtgagccaggtccccgt
ggacttcctgggccccctggtgttccaggccctgctggtttatcactgaatggaaaacct
gggctcccaggtatcagaggtcctcctggaactcggggtgagccaggattaaaaggtatt
tctggcccaccaggtgaacgtggacttaagggtgaaaatggtaatgggaaaccaggaatt
ccaggtatcagggggccaccaggtctaaaaggcagtacaggaccccctggttttccaggt
attggcaaaccaggacagaaaggtttaccaggaccgcctggacttaaaggtgatgaagga
ctgccaggaaatctaggagaaccaggacagcctgggccaccaggtctacaaggtcttcct
gggccagctgggttggggaagcctggtctagatggacttccaggaacaccgggccctgtg
ggtcccaagggtgaacaggggaccagaggaaatcctggaactcctggcgcacctggctat
ggaaaacctggtcttaatgggccaaagggggaaaagggtcatggtggatttccaggtgtc
cctggggacaagggagaacaaggaatagtgggtccaattggggtgccaggtcttgacgga
caaccaggaccacaaggcattcaaggtccaatgggacttccaggaaaacatggaatgcca
gggctgaagggagagctaggacccaagggacccccaggactgcctggactcaaaggtgac
caaggccccagtggaattcctgggcgacctggtttcccaggtgaaaagggtatctctgga
cctaatggttctattggtaaaccaggccctaaaggtgagccagggcaaattggccaacct
gggaatccagggttgacaggttctccagggcctaaaggtgagggaggctttatagggact
ccaggccccagaggccagtcaggaattcctggtctccaagggcctatgggtccaatgggc
ccacagggtgcccctggaccaaggggagaagctggacttccagggcctccagggttaggc
aaactgggtgacaagggatcaatgggtccacaaggtccaccaggaaaaccagggtcttct
gggcttaatggtattcctggtccacctggtcctcctggacctcctggccctccaggaaat
ggccaaactgttgctgcaggggtcactgatgcaggactgggtggggaagaagtacctggg
gacaggaagggtcctgcatacactcaagttctctctgcctcactagcgccagcgttcact
gctattctcaccacaccattcccaccttcggccctgccaatcaaatttgataggaccctg
tataatggacaaaatgcttacagcacttctactggcatcttcaccgctcctttatctggc
gtctactactttgcgtaccacatgcacgtgaagggaactagcctgtgggtggctttgtac
aagaacaatgtgccagccacttatacctacgatgaatacaaaaaaggctacatggaccaa
gcatctggcagtgcagtcctagagcttaaagaaggtgacgaggtatgggttcaaatgccc
tcagatcaagcaaacggcctttactctaccgagtacatccactcctccttttcaggattc
ctgctctgtcccacataa
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