Poecilia reticulata (guppy): 103472247
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Entry
103472247 CDS
T05149
Symbol
vps50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pret04131
]
103472247 (vps50)
Membrane trafficking [BR:
pret04131
]
Protein recycling
Others
EARP complex
103472247 (vps50)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
103472247
NCBI-ProteinID:
XP_008419961
UniProt:
A0A3P9N3D2
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All DBs
Position
LG11:complement(11374578..11476689)
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AA seq
992 aa
AA seq
DB search
MQKIKSLMARQGLKSPQESMADLSPVENLRIPSTEEMRELRQQPIDPQAEQEIIDSIEEV
YFSNDSFDMVRHELEKLPPELNLQELEEYRDKLKRQQAAVSKRVADLILEKQPSYVKELE
RVTALQANLQLAAVICTNARRQLRVSKEEFTEASLGLLANQRRRQLLTGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSRTCKHFDVLHYTKVQKAYTLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNA
DTKFQKMQYKDLCTHITLDSYIPCLTDLCKALWEVMLSYHRTMQWHEEHDKQKTVPSQDD
AAGEPDELTVDRSYVKKKLEHGLTRIWQDVQLKVKVYILGTDMSNFKYDDFIVVLDVISR
LMQVGEEFCGSKSEVLQESIKRQSVNYFKNYHRARLEELRMFLENETWELCPVKSNFNIA
QLHEFKFMGQCRSPSVSPSRQAASSAGPALKELSLFQQYHQDGNPFEMHIEHKEEETEDV
LASNGYESDELEKSVYQDYDSDSDVADELKQDYVDEQTGDAPLKSVSRETIRSKKKSDYN
LSKACAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHCVSQLFDYYLYAVYTFFGRND
MPVPSPSLPTYSGREAVPARVVGPACLYESSGLGLISSRLRTTLNRIQESLIDMDPVGEN
AGVHGPPEDRKEKVPSPHLSQMVILTDSGTLYGLAQRVVATESLVFLAEQFESLQSHLDT
MMPAAKKPFLQQFYSQTVSTASELRKPIYWIVAAKAIDYEQMLLMMAGVKWDIKEIMSQH
NVYVDVLLKEFEQFNKRLGDVSRHVRIPLPVSNVLWEHCIRLANRTLVEGYANVKKCSNE
GRALMQLDFQQFLMKLEKLTDLRPIPDKEFVETYIKAYYLTENDMEQFIKNHREYSMKQL
ANLVNVCLGSHINKKARQKLLAAIDDIDRPKR
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagataaagtctcttatggcccgccagggcctcaaaagcccccaggagagcatg
gctgatctgagtccagtggagaacctgaggatcccgagcacggaggagatgcgggagctg
aggcagcagcccatcgacccccaggcggagcaggaaatcatcgacagcatcgaagaggtc
tacttctccaacgactccttcgacatggtgcggcacgaactggagaagctcccacctgag
ctgaaccttcaggaactggaagagtacagagacaaactcaagagacagcaggctgcagtt
tctaaaagggtcgctgatctcattctggagaagcagccttcttatgtcaaggaactggag
agagtgacagcattacaggccaatctgcagctggcagcagtcatttgcactaatgcaaga
agacaactcagagtttccaaggaggagttcacggaggccagcctgggtctgttagccaat
cagaggaggcgacagctgctgacagggctacttaagtcactgaggaccatcaagaccctg
caaaggacagatgtaagactcagcgagatgctcgaggaggaagactatcccggtgcaatc
cagctctgtctggaatgtcaaaaggcggccagcaccttcaaacactatagctgcatcagt
gagttgaactctaaactacaagacactcttgagcaaatagaggagcagcttgatgtcgcc
ctgtctaggacttgtaagcactttgatgtgttgcactacaccaaggtccagaaggcgtac
acgctccttgggaaaacccagactgctatggatcaactgcacatgcacttcacccaggct
atccacaacacggtgttccaggtcgtcctggggtatgttgagctgtgtgctggcaacgcg
gacaccaagttccagaagatgcaatataaggacttgtgcacgcacatcactctcgacagc
tacatcccctgcctgacagatctctgcaaggctctttgggaggtgatgctgagctaccac
cgcaccatgcagtggcatgaagaacatgacaaacagaagaccgtaccatcgcaagacgat
gcagcaggagaacctgatgagctgactgtggaccgcagctatgtgaagaaaaagcttgag
cacggactgacgcggatctggcaggacgtccagttaaaggtgaaggtgtatattctggga
acggacatgtcaaacttcaaatacgacgatttcatagtggtactagatgtcatcagcagg
ttgatgcaggttggtgaggagttctgtggcagcaagtcagaggttctgcaggagtctatc
aaacgccagagtgtgaactacttcaaaaactatcacagagcacgactagaagagcttagg
atgtttctggaaaacgagacgtgggaactatgtccagtcaagtccaactttaacattgcc
cagctccatgagttcaaattcatgggccagtgccgctctccctccgtttccccaagcaga
caggctgcctcctcagctggcccggccctgaaggagctgtcacttttccagcagtatcat
caggacgggaacccctttgagatgcacattgagcacaaggaagaggagacggaggacgtt
ctcgcgtctaacgggtacgaatcggacgagctggagaagagcgtctatcaggactacgac
agtgacagcgacgtcgcggatgagctcaagcaagactacgtcgacgagcagacgggcgac
gcccctctgaagagtgtgtcccgggagaccataagaagcaagaaaaagtccgattacaac
ctgagcaaagcctgcgcgccgattctcaccaacactaccctcaacgtcatccggcttgtt
ggaaagtacatgcagatgatgaacatcctgaaaccgattgcctttgatgtcatccactgc
gtatcgcagctcttcgactactacctttatgctgtatataccttctttggacgcaatgac
atgcccgtcccaagcccatctctgcccacctatagtggcagagaggcagtcccagccagg
gtggtgggccctgcctgcttgtatgagtcatcgggtctgggcctcatcagcagccgactg
agaaccacactgaaccggatccaggagagtctcattgacatggatcctgttggggagaat
gcaggggtccatggccccccagaggacaggaaggagaaggtccccagtcctcacctgagc
cagatggtgatcctcacagacagtgggactctctatgggctggcacagagagtggtggcc
accgagtctcttgtgtttttggccgagcagtttgagtccctgcagtctcatttggacaca
atgatgcctgctgccaagaagccgttcctgcaacagttttattcccagacggtgtccaca
gccagcgaactgcgtaaaccaatatactggatagtggcagccaaggctatagactacgaa
caaatgctgcttatgatggccggagtcaaatgggacatcaaagagataatgtcgcagcac
aacgtctacgtggacgtgctgctgaaggagtttgagcaattcaacaagcggctcggtgat
gtttccagacacgtgcgcattcctctgcctgtgtccaacgtcctgtgggagcactgcatc
cgcctggctaacaggactctggttgaaggctacgctaacgtgaagaagtgcagcaacgag
ggccgggccctgatgcagctggactttcagcagttcctgatgaagctggagaaactgacg
gacctgcggcccatccccgacaaggagtttgtggagacctacatcaaggcgtactacctg
actgagaacgacatggagcagtttatcaaaaatcacagggagtactccatgaagcagctg
gccaatctggtgaacgtgtgcctgggctcgcacatcaacaaaaaggctcgtcagaaactc
ctggctgccatcgacgacatcgacagaccaaagagatag
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