Poecilia reticulata (guppy): 103472258
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Entry
103472258 CDS
T05149
Symbol
snx13
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pret04990
]
103472258 (snx13)
Domain-containing proteins not elsewhere classified [BR:
pret04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
103472258 (snx13)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
DUF6395
Motif
Other DBs
NCBI-GeneID:
103472258
NCBI-ProteinID:
XP_008419977
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Position
LG11:complement(11663153..11685159)
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AA seq
979 aa
AA seq
DB search
MFKVPLQQISTFLQQTQASLSIWGWGGLGVVLFFVTFGPFAIFYLAFYIFCFIGGGFGVT
LLYGKINSEKHLEKCEHSYLPPTQIGIPKTLDDMKLEVKPIKIDRRLTGSSFIDEPLQQV
IQFALRDYIQYWYYTLSEDESFLLEIRQTLQNALIQFSTRSKEVDWQPYFTTRLVDDFAT
HLRVFRKAQDRLADREDKQRDITDELVDSFFEAEVEMERKICRDVVCTSHRDEEGFLRDL
CELLLYLLLPPGDFHNKSMRYFLREVLAYGVLLPLINQLSDPDYINQFVIWMIRDSSCNY
EAFMNILKLTDKPAELEAVKDKVLEELQYLRSLDTAGDDINVIKNQINSLLFVKKVCETR
IQRLQSGKEVDALKLAASFGKLCVIPLDHILVHNIALQFFMDFMQAAGAQAELFFWLTVE
GYRVTAQQQLEAMESWQKDGKKQPGATKGLLKAAALGVYEQYLSDKASPRVQVDKELVIK
LGENLQKEDPTPEIFDEVQRKVYEMMLRDERFYPSFKQSPLYVRMLAELDMLKEPSYRGS
DDGDGESFNGSPTGSLNLSLDDLSNSCHDEFLQLHAFISDTADSFLPGFWGATGVCNDHG
KTYALYAITVIRRNPDGSEDCWKTYRRYSDFHDFHMRITEQFENLTSILKLPGKKTFNNM
DRDFLEKRKKDLNAYLQLLLNPEMVKACPTLIPYVYDFLENKAYSKGKGEFARKIDTFVN
PLRSSMRNMSNAVKSLPDSLAEGMNKVSDNMGRMSERLGQDIKQNIFKVPPLLPKSDIDP
EHCRVSAQLDDNVDDNIPLRVMLLLMDEVFDLKEKNQWLRRNIKNLLQQLIRATYGDTIN
RKIVDHVDYMTSPEQVAEYVKKFRDSYWPNGILAETPPRRDKCIRMRTRVAAKTSLLGIM
PDELKHIIGADTTRKGILRVFDMFQYQPMNRRLVYVFLEGFLETMFPQYKFPELFVKLHS
RSPRIQRYSQKLQSSSLKR
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaggtccctcttcagcaaatttctacatttctacagcagacacaggccagtctg
tccatctggggatgggggggtcttggagttgtgctgttctttgtaacctttggacctttt
gccatattctacctggccttctatatcttttgcttcattggaggtggctttggagtcact
ttgctttatggaaagataaactcagagaaacacctggaaaaatgcgaacactcttatttg
ccacccacacaaattggtatacccaagacactggatgacatgaaactggaggtaaagcca
ataaagattgacaggagactgactggatccagtttcattgatgagccactacaacaggtg
atccagtttgcgctgagagactatatccagtactggtattacactctgagtgaagatgag
tcctttttgctggagatcagacaaacgctgcagaatgccctcatccagttctccacgcgg
tccaaagaggtggactggcagccttacttcaccacccgcctggtggacgacttcgccacc
catttacgtgtctttagaaaagcccaggatcgcctcgccgacagagaggacaagcagaga
gacataacggatgaactggttgactcattttttgaggctgaagtggagatggaaagaaaa
atttgcagagacgtagtttgcacatcccaccgcgatgaagaaggttttcttcgagacttg
tgtgagttgcttctgtatttgttactacctcctggagatttccacaacaaaagcatgaga
tacttcctgagggaggtgctggcatacggagtgctacttcctctgatcaaccagctgagt
gacccggactatatcaaccagtttgtcatctggatgattcgggactccagctgcaactat
gaagccttcatgaacatcttgaagttgacggacaagccggccgagctggaagctgttaaa
gacaaggtgctggaggagctgcagtatctccgctcactggacacagctggagatgacatc
aatgtgatcaaaaaccagattaacagtcttctgtttgtgaagaaggtgtgtgagaccagg
atccagagactacagtcaggaaaggaggtcgatgccttgaagctggcagccagttttggc
aagctgtgcgttatcccactggatcacatcctcgtccacaacatagcgctgcagttcttc
atggacttcatgcaggcagcgggggctcaggcggagctgttcttttggctcaccgtggag
ggataccgggtgacagctcagcagcagctggaggcgatggagagctggcagaaagacggc
aagaagcagccgggggccaccaagggcctgctgaaggcggctgccctgggggtctatgag
cagtacctgtctgacaaggcgtctcccagggtgcaggtggacaaggagttggtaataaaa
ctgggagagaatctgcagaaagaagaccccacacctgagatatttgatgaagttcagaga
aaagtctacgaaatgatgctgcgtgatgagcgcttctacccgtccttcaagcagagtcct
ctgtacgtccgcatgctggcagagctggacatgctgaaagagccaagttacagaggatct
gacgatggtgatggagagtccttcaacgggtcgcctacaggaagcctaaacctgtcactg
gatgacctcagcaactcctgccatgatgaattcctacaactacacgccttcatatctgac
acggctgattcttttcttcctggcttctggggtgccacaggggtttgcaacgatcatggt
aagacctacgcactttacgccatcaccgtgataagacgcaacccagacggcagcgaggac
tgctggaagacgtaccgccgctactcagacttccatgacttccatatgcgaataacagag
cagtttgagaacttgacgtcaatcctcaagcttccaggaaagaaaaccttcaacaatatg
gacagagacttcttggagaagagaaaaaaagacctcaatgcttaccttcagttgctgcta
aacccagagatggtgaaggcctgtccaactttgattccctacgtctatgacttcctagaa
aacaaggcctacagcaagggcaaaggagagtttgcacgaaagatagacacatttgtgaat
cctttgcggagctccatgaggaacatgtccaacgcagtgaaatccctgccagacagtctg
gctgagggaatgaataaagtctctgacaacatgggccgcatgtcagaaagacttggtcag
gacatcaaacagaacatatttaaggtgcctccacttcttccaaaatccgacatcgaccca
gaacactgtcgagtttctgctcagctggacgacaatgtggacgataacatccctctgcga
gtcatgctgctcctgatggacgaggtgtttgacctcaaagagaaaaaccagtggctgcgc
aggaacattaagaacctgctgcagcagctcatcagagccacttacggcgatacgatcaac
cggaaaattgtggatcatgtcgactatatgacctctccagaacaggtggcggaatatgtg
aaaaagttcagggattcctactggcctaatgggattctagccgagaccccaccgcgccgg
gacaagtgcatccgcatgaggacgcgagtcgctgccaagaccagcctgcttggcatcatg
ccagacgagctgaagcacatcatcggcgcggacaccacgaggaagggcatcctccgcgtc
ttcgacatgtttcagtaccagcccatgaaccggcgcctagtctacgtgttcctggaggga
ttcctggagaccatgttcccccagtacaaattccccgagctgttcgtcaagctgcactcc
cgttcgccgcgcattcaaagatacagccagaaactgcagtcctcctcgctgaagaggtga
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