Poecilia reticulata (guppy): 103472494
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Entry
103472494 CDS
T05149
Name
(RefSeq) VPS10 domain-containing receptor SorCS3-like isoform X1
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pret04131
]
103472494
Membrane trafficking [BR:
pret04131
]
Endocytosis
Others
Others
103472494
Endosome - Lysosome transport
103472494
Endosome - Golgi transport
103472494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
103472494
NCBI-ProteinID:
XP_008420409
UniProt:
A0A3P9N431
LinkDB
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Position
LG1:32458454..32681049
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AA seq
1196 aa
AA seq
DB search
METRAGTRPGSRISLGLWLLITAHALQHARAEISCGSCPSPVQLHREELQLAPGVRSDPA
EEAVEVREPRVTGRESGMLATSVPNFSLDEVKPADSEPGVAEDAALWRAKRSAPDFNEFS
DSDWTSRTAQLDSHKADRSEFGWNRQDGRGNTRQDEPRLNSSTFALTGDSAHNHAVVYWT
GQNSSVILILTKLYDFHIGSVTESTLWRSTDYGSTYERMNDKIGSKAVLSYLYVCPTNKR
KIMVLTDPEFESSVLISTDEGASFQKYRLSFFVLSLLFHPTEEDWALAYSHDQKLYSSVD
FGRKWMLIHEHVTPNRFYWSVSGLDKEPDLVHMEAHTPDGNVQYVTCRAQMCSEANRNYP
FPGYIDISSLVVQDDYIFIQVPTSGRATYYVSYKREAFIQIKLPKYSLPKDLHIVSTDGK
QVFAAVQEWNQNDTYNLYLSDTRGIFFTLAMENVKTTRGIAGNQMLDLYEVAGIKGMLIA
NKKQDNQVKTYITYNKGRDWRLLQAPTADLDGNNIHCILPSCSLHLQLQASENPYVSGTI
STKSSAPGIIVATGNIGAELSYNNVGMFVSSDAGNNWRPIFEEEHNIWFLDAGGALVAVK
QPSVPTKHLWVSFDEGRQWTQHSFSSALLFVDGVLVEAGADNQIMTFFGHFSHRSEWQLI
KIDYKSIFSRKCTEEDYQTWHLHNKGEPCVMGQKQIYMKRRPGNYCMLGRDYSRILSAES
CICRAHDFECDYGYERRNDGNCRPAFWFNPSSVSRSCSQGQNYFNSTGYRKVVLNNCTKG
VKEMYTARKQQCPNRPPKGLSLATKDGKVTANMGSNVTFVVHLDEGDSLRTNIQLDFGDG
TAVSYSNLSWTEEGIKHVYKSAGIFRVTALAENTLGSDTTTLYLHVTCPVEHVQLLAPFV
VIRNKEVNITAVVLPSQSRTVTYFWWLGNNTEPVITLDGSISYTFRSEGMTSITVQVAAA
NAILQDTKSIAVKEFFKSLLLSFSPNLDEFNPDIPEWRQDVGRVIKKALLQVSDFPEDQL
LVAVFPGLPTAAELFLLPNKNQSEGKKRSEEELEKASSVIVSALNQNLVEFELKPGVRVI
VYNTQLTLAPLVDSSPRHSSSAMLMLLSVVFLGLAVFLIYKFKRKIPWINIYAEVNQEKE
QEMIGSVGQADGTPKITLSEFTASKELMEKELDARVKRGVGNACENTREIPNCTSV
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atggagactcgggctggcacccgcccaggctcgcgcatctccctgggtctctggctgctg
atcaccgctcatgccctccaacacgccagggcggagataagttgcggatcttgcccgtcg
cctgttcaacttcaccgggaggagctgcagctggcgccgggggtgcgctccgaccccgcg
gaggaggcggttgaggtcagggaaccccgggttaccggtcgggaatctgggatgcttgct
acttctgtccctaattttagtttggatgaagttaaaccagccgattccgagcctggggtg
gctgaggatgctgcgctctggagagccaagaggagcgctccagactttaacgagttcagc
gacagcgactggaccagccggaccgcgcagctggatagccacaaagctgaccggtcggaa
ttcgggtggaacaggcaggatgggagaggaaatacccggcaggatgagcccagactcaac
agcagcaccttcgctctcactggggactcggcgcacaaccacgccgtggtctactggacc
ggacaaaacagcagcgtcatccttattcttaccaaactctatgactttcacatcggcagc
gtcactgagagcactctctggagatctacagactacggatcaacatatgagaggatgaac
gacaaaatcgggtccaaggccgtcctcagttacctttacgtttgcccaaccaataaaagg
aagattatggtcctgactgatccggagtttgagagcagcgtgctcatcagcactgatgag
ggagccagtttccagaagtaccggctctccttcttcgtcctgagccttttattccacccc
acagaggaggactgggccttggcctacagccacgaccagaagttgtacagctcagtcgac
tttggaaggaaatggatgctcatccacgaacacgtcaccccgaacagattctactggtct
gtttctggactggacaaagaaccagatctggtccacatggaggctcacactccggatgga
aatgtgcagtatgtcacatgcagagctcagatgtgctccgaagccaaccggaattatccg
ttcccgggatacatcgacatcagctctctggtggttcaagacgactacattttcatacag
gttcccacctctggacgagccacttattacgtctcctacaagagagaagctttcatacaa
atcaaactgccaaaatactccctgcctaaggatttgcacatcgtcagcaccgacgggaag
caggtctttgcagcagtgcaggagtggaaccagaacgacacctacaatctctacctgtct
gacaccagagggatcttcttcaccttggccatggaaaatgtcaagacaaccaggggcatc
gctgggaaccagatgttggacctgtatgaggtggctggaatcaaagggatgctaatcgca
aacaagaagcaggacaaccaggtgaagacctacatcacctacaacaaaggccgggactgg
aggctcctgcaggcgccgactgcagacctggatggaaacaacatccactgcatcctgccg
tcttgttcccttcatctccaactgcaagcgtcagagaacccgtacgtgtcgggaacgatc
tccaccaagagctctgctccggggatcatcgttgccacaggaaacattggagcagagctg
tcttataacaacgtcggcatgttcgtatcatcggatgcagggaacaactggagaccgatt
tttgaagaagagcacaatatctggttcctggacgcaggaggcgccctcgttgcggtgaag
cagccgtctgtgccaactaaacatctctgggtcagctttgatgaagggaggcagtggacc
cagcacagcttctcctcggcgctgctgtttgtggacggagtgttggtggaggccggcgca
gacaaccagatcatgaccttctttggacacttcagccaccgctctgagtggcagctcatc
aagatagactacaagtccatcttcagcaggaagtgcaccgaggaagactaccaaacctgg
cacctgcacaacaagggcgagccgtgtgtaatgggtcagaagcagatttacatgaagcgc
cggcctggaaactactgcatgctgggaagggactactccagaatcctctcagctgaatcc
tgtatttgccgagctcatgattttgaatgcgattatggatacgagcggcggaacgacggg
aactgccggccggccttctggttcaatccgtcctctgtgtccagaagctgcagccagggt
cagaactacttcaacagcacagggtaccgtaaagtggtgctgaacaactgcaccaagggc
gtgaaggagatgtacacggccaggaagcagcagtgccccaacaggcccccaaaaggactc
agcctggccaccaaagacgggaaagtcaccgccaacatgggcagcaacgtcaccttcgtg
gtgcacctggacgagggagactctttgaggacgaacatccagctggactttggcgatggc
acagcggtgtcctactccaacctgagctggacggaggagggaataaaacacgtctacaag
tcagcgggaatattccgagtcacggcgctggcagagaacacgctgggctccgacaccact
acgctgtacctgcacgtcacgtgtccggtggagcacgtccagctccttgctcccttcgtg
gtgatcagaaacaaggaggtgaacatcaccgcggtggtcctgcccagccaatcacgcacc
gtcacctacttctggtggcttggcaacaacacagagccggtgataactctggatggcagc
atctcatacaccttcaggagtgaaggaatgaccagcatcacagttcaggtggcagcagct
aacgccatcctgcaggacaccaagagcatcgcggtcaaagaattcttcaaatctctgctt
ttatctttctccccgaacttggacgagttcaaccccgacatacccgagtggaggcaggat
gtgggcagagtaattaagaaggctctgctacaagtgtcagacttcccagaggatcagctc
ttggtcgccgtttttccaggacttccaacagctgcagaacttttcctgctacccaacaag
aaccagtctgagggcaagaagaggagtgaggaagagctagagaaggcgtccagcgtcatc
gtaagcgcactgaaccaaaaccttgtggagtttgagctgaagcccggcgtcagagtcatc
gtctacaacacacagctaacgctggcgccgctggtggactccagtcccagacacagcagc
tctgcgatgctcatgctcctctcggtggtgttcctgggcctcgccgtcttcctcatctac
aagtttaagagaaaaataccttggatcaacatatacgctgaggtgaaccaggagaaggag
caggagatgattggctcggtcggtcaggccgacggcacgccgaaaatcactctgagcgag
ttcacagcgtccaaagagctcatggagaaggaactggatgcccgggtcaagagaggagtc
ggaaacgcctgcgagaacacaagggagatcccaaactgtaccagcgtgtag
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