Poecilia reticulata (guppy): 103472754
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Entry
103472754 CDS
T05149
Symbol
arhgef40
Name
(RefSeq) rho guanine nucleotide exchange factor 40 isoform X1
KO
K24316
Rho guanine nucleotide exchange factor 40
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pret04131
]
103472754 (arhgef40)
Membrane trafficking [BR:
pret04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
103472754 (arhgef40)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KIAA1755_N
SOS1_NGEF_PH
RhoGEF
KIAA1755_C
Spectrin
DHC_N2
IQ_SEC7_PH
Motif
Other DBs
NCBI-GeneID:
103472754
NCBI-ProteinID:
XP_008420805
LinkDB
All DBs
Position
18:complement(6227800..6275443)
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AA seq
1890 aa
AA seq
DB search
MTERLVESRRGSAPHWGGGGNGLGIGGGSVGKQGEKQTECLRGNVRGGRKKNKSYRLPCQ
QHKQKNKQRCPRASPEPCSQMRARLHLSGEFALCFELRAGERAVGATGRRRKCLTLPRSY
NRKLKAAYLCILICVGVSIEGDEPAVQHDTNPDGSEAMEDCVQGALSSLYPPFESTAPPL
LSQVFSVLESTYQHDSLRYLLDYFVPAKHLLHKLQQHACSQYLGCLFLHSGWPLCLGEKV
VVQLSTLDWRLLRSNDFYLQVVPFSTRCPRLALKCLAPGGRTVQEILVPESQHPLVFTSE
WLHSINKERGHKREVGGGLDTCLVSTCDGVVRVPWKEIVYPKFLHDPSEELGLGSKRLSS
EGGSSLGGWGGSSSGDMDSWSWDDEDDDSLPPNCMESDPAIRRRRSEDGLGRTARQPQMD
GDYVELLEPRGGPDGGVDTKQRYLEMHGICKTRTLPLCRRGKAIKLRKGKAWGYAKPERS
GSFRGAYSTKEKEANPKDDLLPAKPPTTVSGSARVRQSYSSSAHDSDEGDKTSRDNNSLE
SCGPYFDVPLKERRPGVGKERDSNGFPQPSQDGHQNKDSQRSDSLITNEIYDLSHKSGHD
VEGQSDHGSHSDSVFEDADKPLSGDNDAVTPTSDAPEKLFTGVSESKDTANVQSKTRNSS
NPKIPDERAEGQTEDRVCPRGKEVKTAGFRAPRRKRKGKGGKGKARSGGKNQKGTKLQGK
SPLPSPTAHSATTKLLIPEEKKAEETEKIDKPDGVPTIDTKGKKNTRKGSGAETEDGSSP
VCNGQSSTSSFNHLTVEAGSPETCPDQINGVTSKEPALLRELDTELLQSGKLQLTGTVDR
LGRALVFTDAGASEEGFCSEEVARVLSCYHRITRPEAKEKGLTVLIDSRCSKPSSLCLSA
LKRFQVLVPGGLGSVLVLVEEQQESLSLALDGTEIHIVLSTGVLQQYVDSQQLPKQLDGD
FSHTHSDWLTFRLRLEKLTERCESALSLLGEALQSLETEEMPNDIKAVPQSIDKHRQLMA
SVLADQRLTELQQRGGAWLAGLTNCSSGLAQWSPDCRAALNATSQLYDGVDDALHRLVQV
SNRRGRDLEALGRLAGMVDKLEKCDKEIEQVQSQLEEYKDPPLSLSRLSLKQQKFRTFRE
TANELHSDTLSVLSDLEGWCELNWAGLSDIQIRLPPVREKLRDMSHCLSDCWTTLDNTQR
LLSTLTEATQWCDAVSSTPSSPTASSSTCPLASLPPIPPSRFQDARSLAMELGGGALLDL
WTQTVERYQRTVAQVKPRFLHSERTQSHGQGKAKTPSSSTFWDLVGPDGEGDWGLGGGDG
GLQSWGSLASLFRPQTCSTLKIGEDKGNRRDGSAGNGGGAGGAGGGKFLQNLLNPGKKSP
PEAPLPPKPPRKRHPSFDLQALLAPRKGTATPKPESPVGGASRSSPMSWLGRKNMADPVI
ATSMAAAIPGWGVGVAGGVGGGVLIRGVEVSSKEVVDHTGSPRQHVLLGRTERDMGTDRT
GSTAQSKLYLLWCRMLSSERQYVAVLKGVEETYLPLLELSDTPASIRGKGDTLFPNWGSL
TAFHSRDLLPAMEGALVQSLLQQDCFSKYREEFLQYSHYIRSKPEMDSPLVTQAADFFKS
KLPQASPVSPLSFPYCLQAPIQRLEQYCEALEELGGLNLASDSALSVLRHAQRHGEDLRA
SDLIVGCPISVAERGDLVRQGELTVCGGPRRKRAGVRNVFLYQHAVIFTKQKSPSPGRTI
YNYKHSIKMSEMGLTQNVGDEGVKFEVWVRQAPRTRDCITLQAQDRAGRESWAHDIAHLL
WTHAINNTELCLKESLCMGVSSKLLLDATGTPGSELDSICSLSDRVHSSCSDSSSVGSQK
EGGSPASGRDPRSSSGSTSYSQSHSPSTAV
NT seq
5673 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaaggcttgtcgagtcgaggcgaggttcagcgccgcattggggtggagggggg
aatggtttgggtattggaggagggagcgtaggaaaacagggagagaaacagactgaatgt
ctaaggggaaatgtgaggggaggaagaaaaaaaaataaaagttacaggttgccatgccaa
cagcacaagcagaaaaataaacagcgatgtcctcgtgcttcgcccgagccgtgttctcag
atgcgcgcgcgtctgcatctgtcgggggagtttgcactttgttttgaactaagggcagga
gagagggcggtgggggccactggccggcggaggaaatgtttgacactccccagatcttac
aacaggaagctgaaagcggcgtatctgtgtatattaatatgtgtgggtgtcagcatcgag
ggagacgagccggctgttcaacacgacacaaacccagacggttcggaggcaatggaggac
tgcgtgcagggggcgctctcgtcactttatccgccgttcgagagcacggcgccacccctg
ctctctcaggtcttctcggtcctggagtcaacttatcaacacgacagcctgcgctacctc
ctggactatttcgtacctgccaagcatctcctgcacaagcttcagcagcatgcctgttct
cagtatttgggatgcttgttccttcactctggctggcccctctgcctgggagagaaagtg
gtcgttcagctctccaccttggactggaggctcctgcgcagtaatgacttctacctgcag
gtggtgcccttttctactcgctgcccacgactggccctgaaatgtctggcacccggaggt
cgcactgtgcaagaaatcttggtgcccgagtcacagcatcccctggtgttcacctctgag
tggctccacagtatcaacaaagaacggggtcacaagagagaagttggagggggactcgac
acctgtctggtcagcacatgcgatggtgtggtaagagtgccgtggaaggaaatagtctac
ccaaagttcctccatgacccttctgaggagcttggcctgggttccaagcgcctttccagt
gaggggggcagcagcctcggagggtggggtggctcctcctcaggagacatggactcctgg
tcctgggacgatgaagacgatgacagtctaccaccaaattgcatggagtctgaccctgcc
atcagacggcggcgcagtgaagacggccttgggcggactgcgaggcagcctcagatggat
ggggattatgtggagcttttggagcccagaggaggacctgatggaggggttgataccaag
cagaggtacttggagatgcatgggatttgtaagaccagaactttgcccttatgcaggaga
ggtaaggccatcaaacttcgcaaaggaaaagcatggggttatgcaaaacctgaaagatcg
ggaagctttcggggtgcctatagtaccaaagagaaggaggcaaatccaaaggatgacttg
ctaccagcaaagcctccaacaacggtttcaggatctgccagagtaagacagtcttactcc
tcctctgctcatgactcagatgaaggagataaaacaagcagggacaacaatagcttggaa
agctgcggcccttattttgatgttccactaaaagaaaggagacctggtgtgggcaaggaa
agagacagcaacgggttcccacaaccatcccaagatggacaccaaaataaagactcccag
agaagcgacagcttaataacaaacgaaatctacgacttaagccataaaagtggccatgac
gttgagggccaatcggatcatggctcacattcagactctgtgtttgaggatgcagataaa
ccactgagtggagacaacgatgctgttacgccaacatcggacgcaccagagaagctattt
actggagtctctgaaagcaaagatacagccaacgttcagtctaagacgaggaactcatca
aacccgaagattccagatgaaagggctgaagggcagacagaggacagagtgtgtcccaga
ggaaaagaagttaaaacagccggattcagagctccacggaggaaacggaagggaaagggc
ggcaaaggaaaggctaggtctggtggcaaaaaccaaaaaggcacaaaactacagggtaaa
agtcctctaccaagtcctacagcccactctgcaactacaaagctgctaatcccagaagaa
aagaaggcagaggaaacagaaaagattgacaaacctgatggagtgcccacaattgacact
aaagggaagaaaaacacaaggaaaggcagtggagctgagacagaagatggatcgtcgcct
gtgtgcaatggtcagtcaagcacatcttcatttaaccacttgactgtggaggctggatca
ccggagacgtgtcctgaccagataaatggtgttacctctaaagagccggcgcttttaagg
gaactggatacagaattacttcagtcagggaagctgcagctgacaggtacagtggacaga
ttggggcgagctctggttttcacagatgcaggtgcttctgaggaggggttctgctcggag
gaggtggcacgggttctttcctgttaccaccggatcactcggcccgaagccaaagaaaag
ggactaactgtgctaatagacagcagatgctccaaaccatctagtctttgcctttctgct
cttaaacggttccaggtcttggttcctggcggtctagggtccgtgttggtcctggtggag
gagcagcaggagtccctttccttagctctagatgggacagagatccacatagtgctcagt
acaggagtccttcagcaatacgtagacagtcagcagcttccaaaacagctggacggagac
ttcagtcacactcactcagactggctgacattcagactgaggttggagaaactgacagag
cgttgtgagagcgccctctctctgcttggagaagccctgcagtccttggagacggaggag
atgccgaatgacatcaaggctgtccctcagagcattgacaaacacaggcagctcatggcg
agtgtgctggctgaccaacgcttaactgaactgcagcagaggggcggagcctggttagca
ggactgactaactgttcatccggactggcgcagtggtcacctgactgcagggctgctctc
aatgctacttcgcaactctacgacggcgtggacgatgccctccatcggctcgtccaggtt
tccaaccggcgaggtcgtgacctggaagcactgggacgactggcaggaatggtggacaaa
ctggaaaagtgtgacaaggagattgagcaagtgcagtcccagctggaggaatacaaggac
cctcctctgtctctcagcaggctgtcgctgaagcagcagaagttcagaacgttcagagaa
acggccaacgagctgcacagcgacactctgtcggtgctcagcgatctggagggctggtgc
gagctgaactgggccggcctcagcgacatccagatccgtctccccccagtgagggagaag
ctgagagacatgtcccactgtctgtccgactgctggaccactctggacaacacccagagg
ctgctgtccacactgacagaggcgacccagtggtgcgatgcggtctcctccaccccttcc
tcccccaccgcctcctcttccacctgcccgctggcgtcccttcctccgatccccccgtct
cgcttccaggacgcacggtccttagccatggagctgggaggcggggccctcctggacctc
tggacccagacagtggagcgctaccagcggaccgtggcgcaggtcaaacctcgtttcctc
cactccgagcggacacagagccacggccaggggaaggccaagacgccatccagcagcacc
ttctgggacctggtggggcccgacggggagggcgactgggggctcggaggaggggatggg
ggcctgcagtcctgggggtccctggcgtcgctgttcaggcctcagacatgctccacgctg
aagataggagaggacaaagggaaccgaagggacgggtcagcggggaatggaggtggagcg
ggaggagccggtggagggaagttcctgcagaaccttctgaatcctgggaagaaaagtccc
ccagaggccccgctccctcccaagcctcccagaaagcgccaccccagctttgacctccag
gctctcctggccccccgcaaaggcaccgccacccccaagccggagtcccccgtcggcggg
gcaagccgctcctcacccatgtcttggctggggcgaaagaacatggcggaccccgtcatc
gccaccagcatggcggcagctattcccgggtggggcgtcggagtagcaggtggagttgga
ggtggtgtgctgatccgaggtgtagaggtcagcagcaaagaagttgtggatcacacaggg
tcgccgcggcaacatgtcctgctcggaagaacggagagggacatggggacagacaggacc
gggtcaactgcacagagtaaactgtacctgctctggtgcaggatgctgagctcggagcgg
cagtacgtcgccgtcctgaagggagttgaagagacctacctgcccctgctggagctctcc
gacaccccggcctccatcagggggaagggagacacgctcttccccaactggggcagcctc
actgcctttcactcgcgggacctgctccctgccatggagggcgctcttgtgcagagtttg
ttgcaacaggactgcttcagcaaatatcgggaggaatttctccagtattcccactacatc
cgctctaaaccagaaatggattctcctctggtcacacaggcagctgacttctttaagtcc
aaactcccccaggcgtcccccgtctcccctctgtctttcccttactgcctgcaggctccc
attcagaggctggagcagtactgcgaggccctggaggagctggggggtttaaatctggcc
tcagactccgccctctccgtcctgagacacgcccagcggcacggcgaggacctcagggcc
agtgacctcatcgtcggctgtccgatctcagtggcagaacgcggtgacctggtgaggcag
ggtgagctcaccgtgtgcgggggacctcggaggaagcgggcgggtgtcaggaatgtcttc
ctctaccagcacgccgtcatcttcaccaagcagaagagcccgagtccaggtcgcaccatc
tacaactacaagcacagcatcaagatgagtgaaatgggtctaactcagaatgtcggcgat
gaaggagtgaagtttgaagtctgggtccgacaggcacccaggaccagagactgtatcacc
cttcaggcccaggatagagcaggaagggagtcctgggctcatgacatagcccatctgctg
tggacgcacgccataaacaatacagagctgtgtctgaaggagtcgctgtgcatgggagtt
tccagtaagcttctgctggacgctacaggaactccgggatcagagctggactccatctgc
agtctcagcgacagagtccacagtagctgctcagactcgtcctctgtgggcagccagaag
gaggggggatccccggcgtctgggagggaccccaggtcaagctccggatcaacaagctat
tcacagagtcattctccctccacagctgtgtga
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