Poecilia reticulata (guppy): 103472761
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Entry
103472761 CDS
T05149
Name
(RefSeq) LOW QUALITY PROTEIN: exosome complex component RRP42-like
KO
K12589
exosome complex component RRP42
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103472761
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pret03019
]
103472761
Messenger RNA biogenesis [BR:
pret03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
103472761
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
103472761
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
103472761
NCBI-ProteinID:
XP_017162850
LinkDB
All DBs
Position
LG11:complement(19784394..19794865)
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AA seq
305 aa
AA seq
DB search
MSSISSLSYDSYQQKCITTEQKKKKPLNRILFSPPCCFFPLSIISSANATPEFEGRGGEE
LGTELSNTLYKVFNNQHSLDLKSLCISPGEHCWVLYVDVLLLQCDGNLYDAISVAIKAAL
FNTKXVCSDDLRVDGRGCEDYRHMEVETDVVSNTDGSAKVTLGHTAVLVGIKAEIGKPRP
MVANEGYLEFFVDWWLSDDPYDCMRLAVENVPCIVTLCKIGHRHVVDATLQEKACSVASL
IISVTHKGIITCSRKVGRGSLDPESICEMIETGKRAGKALHPPLMKLLQQEESLGKKRQK
VGFLG
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccatctcctccctgagctacgatagctatcagcaaaaatgcatcactacagaa
caaaaaaaaaaaaaacctctcaataggatattgttcagtccaccatgttgtttttttcct
ctttcaatcatcagctcagccaatgcaaccccagagtttgagggcagaggaggtgaagag
ctggggacggagctgagtaacaccctctacaaagtcttcaacaaccagcacagcttggat
ctgaagagcctctgcataagtcctggcgagcactgctgggtgctttatgtggacgtgttg
cttcttcagtgtgatgggaatttgtacgacgccatctcagtagcgatcaaagctgctctc
ttcaacacaaagtgagtttgttcagatgatttacgggtggatggaagaggctgcgaggac
tacagacacatggaagtagaaacagatgtggtgtccaacactgacggatccgctaaagtc
actctgggtcacactgcagttctggttgggatcaaggctgagatcggaaaaccgaggccg
atggttgcaaacgagggatayctggagttcttcgttgactggtggctctctgacgacccg
tacgactgcatgagactcgctgtggaaaacgttccctgcatagtgactttatgcaagatc
ggccacagacacgtggtggacgccaccctgcaggagaaggcctgctctgtggcgagcctc
atcatctccgtcacacacaaaggaataatcacctgcagcaggaaggtggggagaggcagc
ctggacccagagagcatctgtgagatgatagagacaggaaaacgagcaggaaaagctctc
caccctcctctcatgaagctgctgcagcaggaggagagtctgggcaagaagaggcagaaa
gtcggattccttggctaa
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