Poecilia reticulata (guppy): 103472822
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Entry
103472822 CDS
T05149
Symbol
tnxb
Name
(RefSeq) tenascin-X
KO
K06252
tenascin
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret04510
Focal adhesion
pret04512
ECM-receptor interaction
pret04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103472822 (tnxb)
04518 Integrin signaling
103472822 (tnxb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103472822 (tnxb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pret00536
]
103472822 (tnxb)
Glycosaminoglycan binding proteins [BR:
pret00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103472822 (tnxb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fibrinogen_C
EGF_TEN
EGF_Teneurin
fn3
EGF_Tenascin
EGF_2
hEGF
DUF7949
EGF
Fn3_Dep-1_3rd
FN3_Tor_3rd
EGF_integrin
Fn3_Dep-1_2nd
Big_5
EGF_laminin
gpW
Motif
Other DBs
NCBI-GeneID:
103472822
NCBI-ProteinID:
XP_008420885
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All DBs
Position
LG11:complement(23125022..23154862)
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AA seq
933 aa
AA seq
DB search
CPGNCNNRGRCVDGKCVCDSGSTGPDCSEVTCPGNCNNRGRCVNGKCVCHDGFTGNDCQE
RACPNDCNDRGRCVDGKCVCDNGFTGTDCTEVTCPGNCNNRGRCVNGQCVCDSGFTGADC
SEKTCPDNCSNRGTCVEGRCVCESGFSGDDCSEYVCPENCNNRGRCIDGQCVCNEGFTGE
DCSEKGCPNNCNNRGRCVNGKCICDVPFTGPDCSIRSCPNDCSNKGRCIKGQCVCRRGFT
GPDCSQCKEGMTGPNCNIAMVGVSQLGVQDITDSSATLIWTQPAVQYETYHITFTSQKEK
DQQVTVQVDGSQTTFTQTGLAAGQEYIVTIVGEINGRRGVESIAEFMTIISGPTNLQVVK
TTSTSAVVQWEESQADIDRYRLTITPKDGAGRSQEMTIEAGQNSAHIQQLEAGRLYDILL
VAEKGVVRSQPATTQVVPGPEPPSNIMFSKVTENSLTVSWTKPKSSLDGFKVTYTHADEG
EPVSVAVGSRDSTLDLAQLSPGSSYEVTVISTLGLDESDPIKDTVMTLPDPPTDLQAVNV
TDSTALLLWRPTLATVDKYTIVYGSGTESEVRVTISGNAAEQQLSGLEGSTTYTVTVRSQ
LGNLESSPATTSFATKSGSGQDQNEPQDLKVNNVTPRSAVVSWTPLSKPVDKYILVYRIK
GESPQEIIVGSDLTQYKLTRLHPGSLYIVELRPIRGGQLAASSNTEFTTGTLKFPFPADC
SQELLNGVVTSDVVEIFPQGKLGKSMNVSCDMETDGGGWTVFQRRKDGSVEFYNGWKDYV
SGFGDLSGEFWLGLEKIHNLTKVTKMNLRVDLQDGSEQVFAKYSTFEVSKRNYKLSVGGY
SGTAGDSLSYHNNCVFSTKDRDPAPWLTRCAISYQAGWWYKNCHEANLNGRYGIDYKHQG
VIWKSWKGEHHSIQFTEMKMRPASFRPPASRTK
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
tgtcctggaaactgcaacaacagggggcgctgtgtcgatggcaaatgcgtttgtgactcc
ggctccacaggtcctgactgctctgaggtcacctgtcctggaaactgcaacaacaggggg
cgctgtgttaatggcaaatgtgtttgtcatgatggtttcactggcaacgactgccaggaa
agagcatgycckaatgactgtaacgaccgtgggagatgtgtagatggcaaatgtgtctgt
gacaacgggtttaccggtactgactgcactgaggtcacctgtcctggaaactgcaacaac
agggggcgctgcgttaatggacagtgtgtttgtgacagtggtttcacaggtgcagaytgc
tctgaaaaaacctgccccgataactgcagcaatcgtggaacatgtgttgaaggccgatgc
gtctgtgagagcggcttctccggcgacgattgttccgagtatgtttgccctgagaactgc
aacaacagggggcgctgcatcgatggacaatgtgtttgtaatgagggattcactggtgaa
gattgctctgaaaaaggttgccccaacaactgcaacaaccgtgggagatgtgtgaatggg
aaatgtatttgtgatgtcccgttcaccggaccggactgttctattagaagttgtcccaat
gactgcagcaacaaagggcgatgcatcaaaggacagtgtgtttgccggcgaggatttact
ggaccggactgcagccagtgcaaagagggcatgactgggccaaactgtaacattgccatg
gtgggtgtgtctcagctgggtgttcaggacatcacagattcttctgccactttgatttgg
actcaacctgctgttcagtatgagacttatcacatcacgtttaccagccagaaagagaag
gatcagcaggtcactgtacaggtggatggaagccagaccaccttcactcaaacgggcctg
gcagccggtcaggagtacatcgtgaccattgttggagagattaatggtagaaggggagtt
gagagcatagctgaatttatgaccattatctctggtccaacaaacctccaagttgttaag
accacctccacttcagcagtagtccaatgggaggagtcgcaggcagacattgacaggtac
cgtttgaccatcacacccaaagacggagcagggaggtctcaggaaatgaccatagaagct
ggccaaaactctgcccatattcagcagctggaggcagggcgtttgtacgacatcttattg
gtggcggagaagggagtggtccgtagccagccagcaactacccaggtagttcccggacca
gagcctccatccaacataatgttcagcaaggtgactgaaaactccctcacagtgtcatgg
acaaaaccaaaaagttctcttgatggtttcaaagtcacctacacccacgcagatgaggga
gagccagtgtcggtggcggtgggctcccgggactccaccctcgatctagctcaactgtct
ccaggatcctcttatgaagtcaccgtcatctccaccctcggactggatgagagcgatcca
attaaagatactgtcatgacactgcctgacccacccactgacctacaagcagtcaatgtg
accgactccacagctttgttactgtggcgtccaactcttgccactgttgataagtacacc
attgtatatggctcaggtacagagtcagaagtgagggttacaatttcaggaaacgcagct
gagcagcagctgagcggccttgaaggatccaccacctacactgtcactgtaagaagtcag
ctgggcaacctggagagttcaccagctacaaccagctttgccaccaaaagcggctcaggg
caagatcaaaatgaacctcaagatctaaaggtcaacaatgtgacccctcggagcgctgtt
gtgtcatggacacctttgtcaaagcctgtggataaatacatactggtttataggatcaaa
ggtgaaagcccacaggaaattattgtaggctcagacctaacgcagtacaagctgaccaga
ctgcatccagggtctctgtacattgtggaactacggccaataaggggaggacaactggca
gccagcagcaacactgaattcactactggcacactgaagttcccattcccagctgactgc
tctcaggaactgttgaacggtgtcgtcacttcagacgtggtggagatcttccctcagggg
aaacttggcaagtcgatgaacgtttcctgtgacatggagacggacggcggcggttggacg
gtcttccagaggaggaaggacggctcggtggaattctacaatggttggaaggattacgtt
tctggctttggagatctgagtggagagttctggcttggccttgaaaaaattcacaacttg
accaaggtgacaaagatgaatctacgggtcgacctacaagacgggagcgagcaggtgttc
gccaagtattcaacatttgaggtgtccaaaaggaactacaaactgagtgtgggcggatac
agcggcactgcaggtgactcccttagttaccacaacaactgtgtcttctccaccaaagac
cgggatccggcaccgtggctcacccgctgtgccatttcttatcaagctggctggtggtac
aaaaactgccatgaggcaaatctgaatggtcgttatggaattgactacaaacatcagggt
gtgatctggaagtcctggaaaggagaacaccattccatccagtttacagagatgaagatg
agaccagcatcattcaggcctccagccagcagaacaaagtga
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