Poecilia reticulata (guppy): 103472826
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Entry
103472826 CDS
T05149
Name
(RefSeq) collagen alpha-1(XIV) chain-like isoform X1
KO
K08133
collagen type XIV alpha
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pret00535
]
103472826
Proteoglycans [BR:
pret00535
]
Extracellular matrix (ECM) proteoglycans
Others
103472826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
VWA_2
Pur_ac_phosph_N
DUF4959
VWA_3
Fn3_nematode
Collagen
Pga1
DUF4992
Motif
Other DBs
NCBI-GeneID:
103472826
NCBI-ProteinID:
XP_017163079
LinkDB
All DBs
Position
LG11:22643433..22754568
Genome browser
AA seq
1516 aa
AA seq
DB search
MQFSVRLSFFLLGFVFIAVLPHTAKGQVSSPRRFRAKVLGQDKLEVSWKEPKGDFEGYKV
IYVTRPGGQQKVLELAKQETKLVIKDYDPSKDYNFKISAVNGGKESKPLQGKHEAQQSGS
ETAQTQGTKKSDVTRENNEISEAEDGFMCKTPAIADIVILVDGSWSIGRINFRLVRAFLE
NLVTAFSVEFDKTRIGLAQYSGDPRIEWHLNAHTTKEAVIEAVKNLPYKGGNTLTGLALT
FILENSFKVESGSRPGVPKIGILITDGKSQDDVIPPAQSLKDAGIELFAVGVKNADENEL
KAIASPPEETHVYNVADFSVMSDIVEGLTKTVCDRVEQLDKKIKGGGGEPAPPVTSIAAP
RNLVTSEITARSFRVTWNHAPGLVEKYRVVYYPASGGQPEEKVVLGTENSVELTYLNSLT
EYQVAVFAVYRSSASEALRGSATTLALPTVNNLELFDITHSTMRVRWKIAAGASGYMILY
APLTEQEAADEKEVKVGDSVNEVELEGLTPATEYTVTVYAMYGEEASDPMTSQQTTLPLI
PASNLRFQDVAHSSVRITWDSPSRLVRGYRIMYVKTSGVQTTEVDLGAVTSHLLKNLTSL
TEYTVGVFAVYKEGEAPAVTESFTTKIVPDPMDLKSSDISSEGFRVSWQHPASDVVLYRL
TWTPTDGGDSEEVLVNGNINTYLIKGLEAAAEYEVLLAAIFTNEVESDEIVLIETTAKRT
TTVATTTTTTLTPRYAVKNLKIDEETTFSIRVSWQAVDSRNVRHYRLTYISARGDRAEET
RTVPSGQTSLVLQPLLSDTDYKVTVIPVYNEGDGPVSSQMGRTHPLSAPRNLRVSEEWYS
RFRISWDVPPSPTMGYRVVYQPLSAPGQALETFVGEDVNTMLIVNLLSGTEYSVKVIASY
TTGSSEALTGKAKTLYLGVTNLSTYQVRMSGVCAQWVPHQHASTYRLVIQSVTGSQKQET
KLGGGASRHCFTSLKPNMEYKISIFSQMQDGTEGPAVTANVKTLPIPTPAPAKPPTTTPP
PTIPPAKEVCKAAKADLVFLVDGSWSIGDDNFLKIIRFLYSTVGALDRIGPDGTQVAIAQ
FSDDARTEFKLNSYGNKERLLDAINKISYKGGNTKTGRAIQHVKENIFTAEGGVRRGIPN
VLVVLTDGRSQDDVNKVSKEMQMSGYIVFAIGFADADYGELVSIASKPSDRHVFFVDDLD
AFQRIEEKLVTFVCEAATATCPSIPMSGSTTPGFRMMELFGLVENKYNSISGVSMVPGTF
NAFPCFHLHSNALMAQPTRFIHPEGLPSDYTITLLFRVLPDTPEEPFAIWEILNKNNDPL
TGVILDNGGKTLTFFNNDYRGDFQTVTFEGPEIKKLFFGSFHKLHIAISKTSAKVFIDCK
MVTEKFINAAGNITTDGVEVLGRMVRSRENKDNSAPFQLQNFDIICSTSWANRDKCCELP
GLRKEVDCPALPKACTCTQDSKGPAGPPGVPGGPGIRGARGDRGEPGPVVSCTALLFLKP
PLCGKGDEIXIILNET
NT seq
4551 nt
NT seq
+upstream
nt +downstream
nt
atgcagttctcagtcagactgagcttcttcctgctgggctttgttttcatcgcagtgytg
cctcacacagcaaaaggccaagtttcatcaccacggagatttcgtgcaaaagtcctgggt
caggacaagcttgaggtgtcatggaaggagccgaaaggagattttgaaggatacaaggtt
atttacgtcacacgtccaggtggacaacagaaggtgcttgaactagcaaagcaggaaacg
aagctggtcattaaagattatgacccctcaaaagattacaactttaagatcagtgctgtg
aatggtgggaaggagagcaaacctcttcaaggaaaacatgaagctcagcaatcaggctcc
gaaacggctcagacccaggggactaaaaagagtgatgtcacacgagaaaacaacgagatc
tcggaagctgaagatggattcatgtgcaagactcctgccatagctgacattgtgattctg
gtggatggctcttggagtatcggtcggatcaacttcaggctggttcgagccttccttgaa
aaccttgtcactgccttttctgtggaatttgacaaaacaagaattggacttgctcagtac
agtggagaccccaggattgagtggcatctgaatgctcacactaccaaagaggctgtgata
gaggctgtgaaaaacctgccctataaaggaggaaacacactgacaggtctggctctcacc
tttatactggaaaacagcttcaaagtagaatctgggtcccggcctggtgttccaaaaata
ggaattctcatcactgatgggaagtcccaagacgatgtgattcctcctgcccaaagcctg
aaggatgctgggatagaactgtttgctgttggtgtgaaaaacgcagatgaaaacgagctg
aaggccattgcgtctcctcccgaggagactcacgtctacaacgtggcagacttcagtgtg
atgagtgacatcgtggaaggtctcaccaagacagtctgcgaccgtgtggagcagcttgac
aaaaaaataaaaggaggaggaggagagccagctccacccgtcacctccattgcagcccct
cgtaatctggtgacatcagagataacagctcgtagttttcgggtcacatggaaccacgcg
ccgggcctagtggagaaatatcgagtggtgtactatccagccagtggaggacaaccagaa
gaaaaggtggttttggggacggagaacagcgtggagctgacctacctgaactccctcaca
gagtaccaggtggccgtttttgccgtctaccgaagctccgccagcgaggccctgagagga
agtgccaccacattggcactgcccacagtgaacaacctcgagttgtttgatatcactcac
agcaccatgagggtccgctggaagatcgccgcgggggcttcggggtacatgatcctgtac
gccccgctgactgagcaagaagctgcagatgagaaggaggtgaaagtgggtgattctgta
aatgaggtggagctggaaggattaactccggccactgaatacactgtgacggtttatgcc
atgtatggagaggaggccagtgatcccatgaccagtcagcagaccacattgccactcatc
ccagcaagtaacctacgtttccaagatgtggcccacagctcagttcgcataacttgggat
tccccttccagattggtgcgaggctaccgtatcatgtacgtcaagaccagcggagttcaa
actactgaggtggaccttggtgctgtgacgagccatttgctcaaaaacctgacctccctg
acggagtacacagtcggggtctttgctgtctacaaagaaggagaagctccagcagtgacc
gaaagcttcaccacaaagattgttccagacccgatggatctgaaaagcagtgatatctcc
tcagaaggtttcagggtgtcatggcaacaccccgcctctgatgtggtgctgtatcgactc
acctggacacccaccgatgggggagacagtgaggaggttctggtgaacggaaacattaac
acctatctgatcaaaggactggaagccgccgccgaatacgaagtcctcctggctgctatc
ttcacaaacgaggttgagagtgatgagatagtgctaatagaaaccactgctaagaggaca
actacagttgctacaacaaccacaacgacattaacacctcgttatgctgtgaagaacctg
aagatcgatgaagaaaccacatttagcattcgggtgtcgtggcaggctgtggactccagg
aatgtccgtcattatcgactgacctacatcagtgccaggggagacagagcagaggagacg
aggacggtgccctcaggtcaaaccagcctggttctgcagcctctcctttcagacacagac
tacaaagtcacagtgattcctgtttataatgagggagatggccccgtatcctcacaaatg
ggtcggacacatcctctttcagctccyaggaacctgcgagtgtcagaagaatggtacagc
cgcttcaggatcagctgggatgttcctccttcgcccactatgggctacagagtcgtctac
cagcctctttctgcccctggacaggcgctggagacttttgttggcgaggatgtgaacacc
atgctgatcgtcaacctcttgagtgggacagagtacagtgtcaaggtcatcgcgtcctac
accacaggatccagcgaggctctaacaggaaaggccaagactttgtatcttggcgtaacc
aatttgagcacatatcaagtgaggatgtctggtgtttgtgctcagtgggtgcctcaccag
catgccagtacctacmgactggttattcaatctgtgactggtagtcagaagcaggagacg
aagctcggtggaggcgccagcagacactgtttcaccagcctgaagcccaacatggagtat
aagatcagcatattctctcagatgcaggacgggaccgaaggacctgctgtgactgcaaat
gtgaagacattaccaatcccaacaccagcaccggccaagcccccgaccaccacgccrcca
cccacaatccctcctgctaaggaagtttgtaaggcagccaaagcagacctggtcttttta
gttgatggttcctggagtatcggtgacgacaacttcctgaagattatccgtttcctgtac
agcaccgtcggagctctggatcggataggcccagatggcacacaggtggccatcgcccag
ttcagtgacgacgctcggactgagttcaagctgaactcctacggtaacaaagagcgtctg
cttgatgccatcaacaagatctcctacaagggaggaaacactaaaacaggtcgagccatc
cagcatgtgaaggaaaacatcttcaccgctgagggaggagtcaggagaggaatccctaac
gtcctggtggttctgactgatggccgatcccaggatgatgtcaataaagtttccaaagag
atgcagatgtcaggttacattgtgtttgcaatcggcttcgctgatgccgactatggagag
ctggtgagcatcgccagcaaaccgagcgacaggcacgtcttcttcgtggacgayctggac
gcctttcagaggatcgaagagaagctggtgacctttgtgtgcgaggccgctactgcgact
tgtccatcaataccaatgagtggcagcacaaccccaggtttccgtatgatggagctgttt
ggacttgttgaaaataagtacaacagcatctctggtgtttccatggtacctggcaccttc
aatgcctttccctgtttccacctgcacagcaacgctctgatggcacagccaaccaggttt
atccatcctgaggggcttccctccgactacaccatcaccctgctgttcagagtgctgcct
gacacgccggaggagccctttgctatctgggagatcctcaataagaacaacgatccgctt
accggagtcatcctggacaatggaggaaaaactctgacattcttcaacaacgactacagg
ggagattttcagactgtcacatttgaaggtccagaaatcaaaaaactcttcttcggaagc
tttcacaagctgcacattgcaatcagcaagacgagcgccaaagtgttcatcgactgcaaa
atggtgacagagaagttcatcaacgcagcaggaaacatcaccacagacggagtggaagtt
ctgggcaggatggttcgctcccgagagaacaaggacaactctgcaccgttccagctccag
aactttgacattatttgcagcacatcctgggccaacagagacaagtgctgtgaactgcct
ggtctgaggaaggaggtagactgtccagccttacccaaagcctgcacctgcacacaggac
agcaaaggtccagctggtcctcccggagtgcctggcggtcctggaatcagaggggccaga
ggtgatcgtggagagccgggtccagtggtaagttgtactgctttactctttttaaagcca
ccgctgtgtggaaagggtgatgaaatctktatcattctgaatgaaacttaa
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integrated database retrieval system
