Poecilia reticulata (guppy): 103472838
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Entry
103472838 CDS
T05149
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 4-like isoform X1
KO
K11643
chromodomain-helicase-DNA-binding protein 4 [EC:5.6.2.-]
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103472838
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pret03036
]
103472838
Chromosome and associated proteins [BR:
pret03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
103472838
Chromatin remodeling factors
NuRD complex
103472838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
DUF1087
PHD
Chromo
ResIII
HDA2-3
PHD-1st_NSD
PHDvar_NSD
HTH_Hrp3
DEAD
PHD_2
Cep57_MT_bd
AAA_22
Motif
Other DBs
NCBI-GeneID:
103472838
NCBI-ProteinID:
XP_008420899
UniProt:
A0A3P9MWP5
LinkDB
All DBs
Position
LG11:complement(24359738..24383379)
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AA seq
1967 aa
AA seq
DB search
MSGSEDDRDDYGAADDRLMQDDEEEEISENESPKVKKKKKKAKKSRESKGSKRRSRREEL
TISSPEPMDMGGVEDVEDTGSAQRSESEGSDYTPGRKKKKKASGGKEKKRNSVPERSSKR
KEPEPEEDDDDDDDDSEPKSSSQLLDDWGMEDIDHVFTEEDYRSLTNYKAFSQFVRPLIA
AKNPKIAVSKMMMVLGAKWREFSTNNPLRGAAAANAALATANIPAAVETMVAEVTPAAEP
PAAPAEPLPTPAPPPLRKAKTKEGKGPNARKKSKPAPKPQEKKNNNAKTKKVAPLKIKLG
GFNSKRKRSSSEEDEPDVDSDFENGSINSVSISEGSNSRSSRSKKKLSKNKPKRKKETED
GDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGTWSCPHCEKEGIQW
EAREDASEGEEDNGETGEMEEDDHHMEFCRVCKDGGELLCCDSCPSSYHIHCLNPPLPEI
PNGEWICPRCTCPTLKGKVQKILTWRWGDPPPPTPVPRPPDLPAEAPDPAPLAGRSEREF
FAKWSNMSYWHCSWVTELQLEMHCQVMFRNYQRKNDMDEPPPIDFGEGEEDKCLKRKHKD
PMYTHLEEKYLRYGIKFEWLMIHRILNHSVDRKNNVHYLIKWRELAYDQATWESEDMDVP
EFDTYKVQYWNHRELMMGDDGRPGKKIKVKGRVKRPERPPENPVIDPTIKFERQPDYLDS
TGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVS
APLSTIINWEREFEMWAPDMYVVTYVGDKDSRAVIRENEFSFEDNAIRGGKKASRMKKDS
SIKFHVLLTSYELITIDMAILGSIDWACLVVDEAHRLKNNQSKFFRVLNNYPLQHKLLLT
GTPLQNNLEELFHLLNFLTPERFNNLEVFLEEFADIAKEDQIKKLHDMLGPHMLRRLKAD
VFKHMPSKTELIVRVELSPMQKKYYKFILTKNFEALNTKGGGNQVSLLNVVMDLKKCCNH
PYLFPAAAMEAPKMPNGMYDGSALTKSSGKLLLLQKMMRKLKEGGHRVLIFSQMTKMLDL
LEDFLENEGYKYERIDGGITGGMRQEAIDRFNAPGAQQFAFLLSTRAGGLGINLATADTV
IIYDSDWNPHNDIQAFSRAHRIGQNRKVMIYRFVTKASVEERITQVAKKKMMLTHLVVRP
GLGSKTGSMSKQELDDILKFGTEQLFKDDGEGENKEEDSSIIHYDDKAIERLLDRNQDAT
DDTELQSMNEYLSSFKVAQYVVKDEEEEEEEVQREIIKQEESVDPDYWEKLLRHHYEQQQ
EDLARNLGKGKRIRKQVNYNDGSQEDRADWQDDQSDGQSDYSVASEEGDEDFDERSEANS
RRPNRKGLRNDKDKPLPPLLARVGGNIEVLGFNSRQRKAFLNAVMRYGMPPQDAFTTQWL
VRDLRGKSEKEFKAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLIRK
KVQEFEHVNGQWSMPWMADLEENKRAAAQPDSPGKTPSTGTPADTQPNTPAPADDSVKND
EAPKDGEKDAKKEGEADKNGKEPAKANSEVIAIPDDDEKVPVETQEKKNGEEPMETDKPS
NGEAESAKEKEGEEGEGEGEGEKKSAEGGEEDKPAVDEKTEPAEVKPEEPEVKGEEKKEE
KTEKMDTTPPAEEKKDVKEEKEAPKPEEAAKLQNGDGSKEGVATAATAAAAASTASGVSE
EKKKAKTRFMFNIADGGFTELHSLWQNEERAATVTKKTNEIWHRRHDYWLLAGIIQHGYA
RWQDIQNDVRFAILNEPFKGEMNRGNFLEIKNKFLARRFKLLEQALVIEEQLRRAAYLNM
SEDPSHPSMALNTRFSEVECLAESHQHLSKESMSGNKPANAVLHKVLKQLEELLSDMKAD
VTRLPATIARIPPVAVRLQMSERNILSRLASRGPETQTQTQQQMPQQ
NT seq
5904 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaagtgaagatgacagagacgattatggagccgccgacgaccgcctaatgcaa
gatgatgaggaagaggagatctcagagaatgagtctccgaaggtgaagaagaagaagaaa
aaggccaagaagagccgggagagcaagggcagcaagaggcggtcgcgcagagaggagttg
acgatcagctccccagagcccatggacatgggtggagtggaagacgtggaggatacgggc
tcggcccaacgctccgagagcgagggcagcgactacactccaggacgcaagaagaagaag
aaagccagcggtggcaaagagaagaagaggaacagtgttcccgaaaggagctccaaaagg
aaagaaccagagccagaggaggacgacgacgatgacgatgatgactcggagccaaagtca
tcatctcagctgctggacgactggggcatggaggacattgaccatgtgttcaccgaggag
gattacagatccctgaccaactacaaggccttcagccagtttgtcaggccgctcattgca
gccaagaatcccaagatcgccgtgtccaagatgatgatggttttgggggcaaagtggcga
gagttcagcacaaacaaccctctgagaggagcagcagctgcgaatgctgcgctggctacc
gctaacataccagctgctgtagagaccatggtggcagaggtcacacctgcagccgagccc
ccggcagccccggccgagcctctgccgacgccggcgccgccgcctctccgcaaagccaaa
accaaggagggcaaaggtcccaacgcccgcaagaaatccaaaccagcaccaaagccacaa
gagaagaagaataacaatgccaagacgaagaaggtcgctcctttgaaaatcaagctggga
ggcttcaacagcaaaaggaagcgctcctcgagcgaggaggacgagcccgacgtcgacagc
gactttgagaatggcagcatcaacagtgtctccatctcggagggttcgaacagccgcagc
agccgcagcaagaagaagctctccaagaacaaacccaagaggaagaaagaaacggaagat
ggcgatgggtacgagacggaccatcaggactactgcgaggtttgccagcagggaggggag
atcatcctgtgtgacacctgccccagagcgtaccacatggtgtgtctggacccygacatg
gagaaggccccggagggcacctggagctgcccgcactgcgagaaggagggcatccagtgg
gaagccagagaggatgcctcagagggagaggaggacaacggcgagacgggcgagatggag
gaggacgaccatcacatggagttctgccgggtttgcaaagacggaggcgagctcctctgc
tgcgactcgtgtccgtcgtcgtaccacatccactgcctgaaccctccgctgcccgagatt
cccaatggggagtggatctgcccccggtgcacatgtccgaccttgaaggggaaggttcag
aagatcctaacatggcggtggggagacccgcctcctcctacgcccgtgccacgccctccg
gatctccccgccgaagccccagaccccgcccctctggccgggcggtccgaacgggagttc
ttcgccaaatggtccaacatgtcttactggcattgctcttgggtcacggagctccagctg
gagatgcactgccaggtgatgttcaggaactaccagaggaaaaacgacatggacgagccg
ccgcccatcgacttcggcgaaggagaggaggacaagtgcctgaagaggaagcacaaggat
cccatgtacactcacctggaggagaaataccttcgctacgggatcaagtttgagtggctg
atgatccaccgcatcctgaaccacagtgtggacaggaagaacaacgtccactacctgatc
aaatggcgcgagctggcgtacgaccaggccacctgggagtccgaggacatggacgtaccc
gagttcgacacctataaggttcagtactggaaccacagagagctgatgatgggagacgat
gggagaccagggaagaagatcaaggtgaaaggaagagtgaagcggccagagagacccccc
gagaacccggtgatagatccgaccataaagtttgagcggcagccagattacctggacagc
actggtgggactctgcacccttaccagctggagggtctcaactggctgcggttctcttgg
gctcagggcacagacaccatcctggctgacgagatgggtctgggcaagacggtccaaacc
gccgtcttcctctactcgctctataaggagggtcactccaaggggccgttcctggtcagc
gctcctctctccaccatcataaactgggagagagagtttgagatgtgggcgcccgacatg
tacgttgtgacgtacgtcggagacaaagacagcagagccgtcatcagggagaacgagttc
tccttcgaggacaacgccatccgcggagggaagaaggcgtcgaggatgaagaaagattca
tcaatcaagttccacgtcctgctgacttcctacgagttgatcaccatcgacatggccatc
ctaggctccatagactgggcctgcctggtggtggacgaggcccacagactgaaaaacaat
cagtccaagtttttccgggtcttgaacaattacccgctgcaacacaagctgctgctgacg
ggaactccactgcagaacaacctggaggagcttttccacctgctgaacttcctcacaccc
gagaggttcaacaacctggaggtctttctggaagagtttgctgacatcgctaaggaggat
cagatcaagaagctccacgacatgctgggtccgcacatgttgaggaggctgaaggccgac
gtcttcaagcacatgccttccaagaccgagctcatcgtccgggtggagctcagtcccatg
cagaaaaaatactacaaatttatcttgacgaaaaactttgaggccctcaacacaaaaggt
ggaggaaaccaggtttctctgctgaacgtcgtcatggacctgaagaagtgctgcaaccat
ccctacctctttcctgcagcagctatggaagcgccgaagatgcccaatgggatgtacgac
gggagcgctctcacaaagtcctctggaaaactgctgctgctgcagaagatgatgaggaag
ctgaaggaaggaggacacagagtcctcatcttctcacagatgaccaagatgttggatctg
ttggaggacttcttggaaaatgaagggtacaaatatgagcggatcgacggaggaatcacc
ggcgggatgagacaggaagccatcgatcgttttaacgctcccggcgctcagcagtttgcg
ttcttgttgtccacgagggccggcggtctgggaatcaatctggccacagccgacacggtc
atcatttacgactcggactggaatcctcacaatgacatccaggccttcagcagagctcat
cgtatcggtcagaacagaaaggtcatgatctacagatttgtcactaaggcctctgtggag
gagaggattactcaggtggccaagaagaagatgatgttgactcacctggtggtccgaccc
ggtctcggatccaagacgggctccatgtctaaacaggagctggacgacattctcaagttc
ggaacagaacagctgttcaaggacgacggagaaggtgagaacaaagaggaagacagcagc
atcatccattacgacgacaaagccatcgagcgacttctcgaccgcaatcaggacgccacc
gacgacacggagctgcagagcatgaacgaatacctgagctccttcaaagtggctcagtat
gtggtgaaagacgaggaggaagaggaggaggaagtgcagcgagaaatcatcaagcaggag
gagagcgtcgacccagactactgggagaagctgctgcggcaccactatgagcagcagcag
gaggatctggccagaaacctgggcaaaggcaaacgcatccgcaagcaggtcaactacaac
gacgggtcacaggaagacagagctgattggcaggacgaccagtctgatggacagtcggat
tactctgtggcgtctgaggaaggggatgaagactttgatgagcgatcagaagccaactct
cgcaggcccaacaggaagggcctgaggaacgacaaagacaaaccactgccccccctgctg
gccagggtcggaggcaacattgaggtgttgggtttcaattctcggcagaggaaggccttc
ctgaacgcggtgatgcgttatgggatgcctccgcaggacgccttcaccactcagtggctg
gtccgagacctgcgggggaaatctgagaaagaattcaaggcttacgtgtctctgttcatg
cgccacctgtgcgaacccggagcagacggagctgagactttcgcagatggcgtccccaga
gaagggttgtcccggcaacatgtcctcacacgcattggtgtcatgtcacttatacgcaaa
aaagtccaggagtttgagcacgtcaacggtcagtggtccatgccctggatggcygacctg
gaggagaacaagagggccgcggctcagccggactctccagggaaaaccccgtccaccggg
accccggccgacacacagcccaacactcctgctccagctgatgactcggtgaagaatgac
gaggcaccaaaggatggagagaaagacgcaaagaaagaaggcgaggcagataaaaacggc
aaagagccagctaaggccaacagcgaggttatcgccatcccggacgacgatgagaaggtc
cctgtggagacgcaggagaagaaaaacggcgaggagccgatggagacggacaaaccgagc
aacggagaagcggagagcgcaaaggaaaaggaaggagaggagggagagggagagggagag
ggagagaagaagagcgcagagggaggagaggaagacaaaccagctgtagatgaaaagacg
gagcctgcagaagtcaaacctgaggagcctgaagtcaaaggagaggaaaagaaggaagag
aagactgaaaagatggacaccactcctcctgcagaagaaaagaaagacgtgaaggaggag
aaagaagctccaaaaccagaggaggcggccaagctgcagaacggagacggcagcaaagag
ggcgtggctacagcggctacagcggcggcagcggcttccaccgccagcggcgtgagcgag
gagaagaagaaagccaaaacccgattcatgttcaacatcgcagatggaggattcacagag
ctgcactctttatggcagaacgargagcgcgccgccacggttaccaagaaaaccaatgag
atctggcaccgtcgccatgactactggctgctggccggcatcatacaacacggctacgcc
cgctggcaggacatccagaacgacgtgaggtttgccatcctcaacgagccgttcaaaggg
gagatgaacaggggcaacttcctggaaatcaagaacaagttcctggctcgaaggttcaag
ctgttggagcaggcgcttgtgatcgaggagcagctgcgtcgcgccgcctacctcaacatg
tcagaggatccctcccacccctccatggccctgaacacccgcttcagcgaggtggagtgt
ctggccgagtcccaccagcacttaagcaaggagtccatgtccgggaacaaaccggccaay
gccgtcctgcacaaagtgctaaagcagttggaagagctgctgagtgacatgaaggcggac
gtgacccgcctcccagcaaccatcgcccggataccgccggttgctgtccgactccagatg
tctgagaggaacatcctgagccgcctagcgagccgaggaccagaaacacagacgcagacg
cagcagcagatgccgcagcagtag
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