Poecilia reticulata (guppy): 103473063
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Entry
103473063 CDS
T05149
Name
(RefSeq) serine/arginine-rich splicing factor 4-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03040
Spliceosome
pret05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103473063
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
103473063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pret03041
]
103473063
Spliceosome [BR:
pret03041
]
Common components
Common spliceosomal components
SR proteins
103473063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
103473063
NCBI-ProteinID:
XP_008421219
LinkDB
All DBs
Position
LG11:complement(28204771..28210947)
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AA seq
371 aa
AA seq
DB search
MSRVYIGRLSYRAREKDVERFFKGYGKILEVDLKNGYGFVEFDDPRDADDAVYDLNGKEL
CGERVIVEHTKGPRRDGGYTGGRSGYGRWGGRDRYGPPVRTDYRLIVENLSSRCSWQDLK
DYMRQAGEVTYADTHKGRKNEGVIEFRQYSDMKRALEKLDGTEVNGRKIRLIEDRPGARR
RRSYSRSHSRSRSRSRRSHKSRSRSDSSSRSRSRSRAASRSRSRSHSKKSKSKKDEEERN
GAAKDDERSPSRSRSPRSKKSKKDGKSAKKDESRSRSRSASRSRSRSRSRSRSGSKDRPR
KSGSQDGEPPKSDVEAAEAERPSRSPEEPRAGSKSKSKSRSASPAKAGSRSRSASRSESR
SKSRSRSRSRS
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgggtctacatcggtcggctgagctacagagccagagagaaggacgtggagagg
ttcttcaagggttatgggaagattctggaagtggacctgaaaaatggctacggctttgta
gagttcgatgaccctcgtgacgcagacgatgccgtgtacgacctgaacggcaaagagctg
tgtggggagagggtcatcgtggagcacaccaaggggccgcggcgggacgggggctacacc
gggggccgcagtggctatgggcgctggggaggcagggacaggtacggcccacctgtccgc
accgattaccgcctcatagtggagaatctgtccagccgctgcagctggcaggacctgaag
gactacatgaggcaggcgggcgaggtgacgtacgccgacacccacaaaggccgtaagaac
gaaggcgtgatcgagttccggcagtactcggacatgaagcgggccctggagaagctggac
ggaaccgaggtcaacggcaggaagatccggctcatcgaggaccggcccggcgcccgccgc
cgccgctcatactcccgcagccactccaggtcccggtccaggagccgccggtcccacaag
agccgcagccgcagcgacagcagcagccggtcccggtcccgctccagagccgcgtcccgc
agccgcagccgcagccacagcaagaagagcaagagcaagaaggacgaggaagagcgcaac
ggcgccgccaaggacgacgagcgcagcccgagccgcagccgcagccccaggagcaaaaag
agcaagaaggacggcaagtctgccaagaaggacgagtcccggtcccgctccaggtccgcc
tcccgctccaggtctcgctccaggtcccgctccaggtccggctccaaggaccggcccagg
aagtccggctcccaggacggcgagccgcccaagagcgacgtggaggcggcggaggccgag
cggccgtcccgctcccccgaggagcccagagccggatccaagtccaagtccaagtcccgg
tccgcgtcgccggccaaagccggctccaggtcccgctccgcctcccgctccgagtcccgc
tccaagtctcggtcccggtcccgttcccgctcctag
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