Poecilia reticulata (guppy): 103473236
Help
Entry
103473236 CDS
T05149
Name
(RefSeq) tetratricopeptide repeat protein 28-like isoform X3
KO
K24936
tetratricopeptide repeat protein 28
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pret03037
]
103473236
Cilium and associated proteins [BR:
pret03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
103473236
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_8
TPR_2
TPR_10
TPR_MalT
TPR_17
Rapsyn_N
TPR_16
RPN7
TPR_14
TPR_NPHP3
TPR_11
PUB
TPR_6
TPR_19
TPR_9
Motif
Other DBs
NCBI-GeneID:
103473236
NCBI-ProteinID:
XP_008421528
LinkDB
All DBs
Position
LG12:complement(3216978..3332507)
Genome browser
AA seq
2541 aa
AA seq
DB search
MEKPRARKEKFSLFGSRTASRATNPSTSSSRSSSPGIPSAQVGKRLDRISGSSGPAALSK
AEFLERVRRSNQACQQGEFALAVRLYTEALTADPQNCILYSNRSAAYLKLGQHGKALDDA
IKARLINPKWPKAYFRQGVALQYLGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSPL
RDTLEPTYQQLQRMKLDKSPFVVVSVIGQELLTHGYHGASVVVLEAGLKIGTCSLKLRGS
VFSALSSAYWNLGDVERSMAHMQQDLEVTKTLGDQSGECRAHGNLGSALFSKSSYREALA
HHRNQLVLAMKLKDREAASGALSSLGHVYTAIGDYPNALASHKQCVLLARQTRCQLSEAR
QLGDMGAVYTALGDFTNAVQCHEQHLDIAKSLENRREEARAYSNLGSAYHSQRDFDKAIS
YHTKVLELAREQSDRTIEMRAYAGLGHAARCMQDLERARQYHQSQLEIAQELQDRAAQGR
ASSNLGIIHHMKGEYETALKLHKAHLLLAQELGDYAAQGRAYGNMGNAHHALGVYDQAVR
YHRQELQISLEVNDRQSQASTHGNLAVAYQALGAHDRALQHYRHHLTIARELRDTQTEAR
ALANLGNFHSWRGEYAQALPYFQQYLALSPGLQDLEGEGKVCHNLAYAHYCLGQYKDSVR
YYEQDLALAKDLQDKLAQAKAYCNLGLAHKALGEYRRAEECQRYLLSLAQALDNTQAVFR
AYGNLGDVFVCRGDPPGALKFYQQQLAVAQKAADQKMEADAYAALGSVHRLLRQLDAALS
FHSRELTLRKDLADPQGECRALGRLAAVHMALGDYTTTFQCYEAQLGLAQGLRDARLEAQ
VHGNMGITKMNMAVFEEAIGYFEQQLAMLQQLSGSEGMLDRGRAYGSLADCYDALGDYEE
AIQYYEKYLTVAQSLNHVQDQEKAYRGLGNAHRSLGSLQQALVCFEKRLVVAHELGGEGG
GKAQAYGELGTLHSQLGNYEQALSCLEHQLSIARSAGDKSLEAEASGALGGVYQLMADNE
TALQWHQRALSIAEQTGCVRSQGRAYGNLGLTYEALGNYERAVVFQEQHLSVAAQTNDLT
AKTMAYGSLGRTHHALQNYTQAVMYLQEGLRLAEQLSRREDEAKIRHRLGLSLRAGGNLE
EAQHQLYRASALFETIRHETQHNLDYKLSLFDLQTSSYQALQRVLVSLGRHDEALAIAER
GRTRAFADLLVERQRGSRQAAGADPYIPVTVEHILETVNGQKGLILYYSLAGGFLYSWLI
SPGTGIVKFNEAYLGEAGPEASEFQDGSGSPHGGGPVSLDQYICNAREALGVDSHHSRVC
SGSETESEAGDLLEQQFEELNNNLASATDPTGYLRMVSRNNRFNRSCRSMTSLYSSTVSP
VKDGLSPVCRPSNVGKPPLRALYDLLIAPMEGGLMHSSGSVGRNRQLVVVLEGELYLIPF
ALLKGSSSNEYLYERFNIISVPSLASLQATSKPNSRPSGPLLCPDGGSVAAVVGAPQLPP
SVMDRWLWGPLPSAQDEALSLGEQLGCHPLTGANATKERVLAALSQAECVHFATHTSWKL
AAIVLSPNHERSAGDGPQENALRGTAALADGADHEGKVERLFPRSHSSPERLRGAEERSE
DGESVCGVESLCDSTPLHDFLLTAADILDLCLSVKLVVLRSYPESSCRVTADGVVGLTRA
FLAAGVQCVCVSLWPVQVAASKLFMHTFYTALLNGSKASVALTEAMRNLQSSKHFSHPSN
WAGYLLIGSDVKLNSPMSLVGQALAEILQYPEKARDALRVLLHLVEKSLQRIQSGHCNPM
YTSQQSVENKVGGVPGWQALLSAVGFQLEVSGCGGGLPAAVFFPTSDPGDRLQQCSTTLQ
ALLGLTPPALQALCKLVTTSEAGEQLIHKAVKSMVVTLHQVLVQLQSGDKEQDFPLAPIQ
VSISVQLWRLPGCHEFLAALGFDLCEVGQEEVVLKTGKQASRRNMHFALQALLALFDSTE
LPKRLSMDSSSSLESLSSSQSASQPQSLPLSLSCYPPQPSFLPPGCSDNLSCDAISVYSL
SSLASSLSFLSRPEPAGSDIISHRSHQQEPEKQGGGTGLYYSSQRLARGRLANHGGASAG
GEDEEYEGFSIISSEPLGRAGRECDTLPLPAGHRQGRGGSGRGSAVGQTLIVSSKGSIST
PTSPLKAPPLALLDHPSCQVTQQISLPTRTVKGKVSSSESDQSSTETDSTVKSQEERMGP
AGQLDPHELAQKILEETHSHMQAVETLQKANTRVTSLRGAGGRQDPHTRQPSLSTPTTPT
FKPTRGARGFQPSETSAFSRPPSRASLKAGSSPFTVHKHLSPHASDSRPPPTPPKPPSRS
SSLQKINTSASSSPSSSLLAKEKKSPVVSQHKPKYSGSPYSCHISPSRSPADSASSPALS
YSSRGSVSAASSPTDPSELSQSKQDKVQAMHNLKTFWAGVGQKQEVPGRLASLRGGDKKM
STVQKDVLGLLNLSPRHGSGRKHADRQEDHDRPNGHRKLEPKPPLAPSADLPTNHKGGFK
LPSGNGYKFLSPGQFCPSSKC
NT seq
7626 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagcccagagcgaggaaagaaaagttctccctttttggctctcgcaccgccagc
agagccaccaacccttccacctcatcctctcgctcttcatctcccgggatcccctcggcc
caagtcgggaaaaggctggatcggatttccggctccagcggtccagccgccttgagcaaa
gctgagttcttggaacgtgtgcgccgcagtaaccaggcctgtcagcagggggagtttgcg
ctggctgtacgtctctacaccgaggccctcaccgcggacccgcaaaactgcatcctgtac
agcaaccggtctgcggcctacctcaaactgggacagcatggcaaggctctggacgacgca
atcaaagcccgtctaattaaccccaaatggcccaaggcttactttcgacaaggggttgct
ctgcagtacctgggtcgtcatgccgacgcgctggcagcgttcgcgtcaggcctggcacag
gaccccaagagtctccagctgcttgtcgggatggtggaggcggcaatgaaatcaccactc
agagacacacttgagcccacctaccagcagcttcagaggatgaagctggacaagagcccg
ttcgtagtggtgtccgtcatcggccaggagctgctgacgcatggttaccacggcgcctct
gtggtggtgctagaggcggggctgaagatcggcacatgctcgctgaagctgcgcggctcc
gtcttctccgctctcagctcggcgtactggaacctcggagatgtggagagaagcatggct
cacatgcagcaggacctggaggtgaccaagactctaggagaccagtcgggtgaatgccgg
gctcatgggaacctcggctcggcgttgttctctaaaagcagctacagagaagcgctggcc
caccacagaaaccagctggtgctggccatgaagctcaaggacagagaagcggcgtcgggc
gccctcagcagcctgggccatgtgtacaccgccataggggactaccccaacgctcttgcc
agccacaaacagtgtgtcctgctggcccgccagacccgctgccagctgtctgaggcgcgc
cagctgggtgacatgggtgccgtttacaccgcactgggagacttcaccaacgccgtccag
tgtcacgagcaacacctcgatatcgcaaagtctttggagaaccggagagaggaggcccgg
gcgtacagcaacctgggcagcgcctaccactcacagcgggactttgacaaggccatatct
taccataccaaggtgctggaattggcgcgggaacagtcggacagaacgattgagatgagg
gcgtacgccggtctgggtcatgctgctcgatgcatgcaggacctggagagggcccgtcag
taccaccaaagccagttagagattgctcaggagctgcaagacagggcggctcagggccgg
gcttcctccaacctgggcatcatacatcacatgaagggggagtatgaaacagcgctgaag
ctccacaaagcccacctgttgttggcgcaggagctgggtgactatgcggcgcagggcagg
gcctacgggaacatgggtaacgcacatcatgcgctgggcgtctacgaccaggcggtgcgg
taccacaggcaggagctgcagatctctctggaggtgaacgatcgccagtcgcaggcctcc
actcacggtaacctggcagtggcttatcaggcgctgggagctcatgaccgtgctctccag
cattaccgtcaccacctgaccatcgcacgggaactcagagacactcagacggaagcgaga
gccctagcaaacctggggaacttccacagctggaggggagagtacgctcaggctctgccc
tacttccagcagtacctggctctgtccccggggctgcaggacctggagggtgaagggaaa
gtctgccacaatctggcctatgctcactactgcctgggacagtacaaagattctgtcagg
tattatgagcaggacctggccctggctaaagacctgcaggacaaattagcacaagctaaa
gcctactgtaacctgggtttggcccacaaagctctcggagagtacagacgagcagaggag
tgtcagagatacctgctctctctggctcaggctctggataacacacaggcggttttcagg
gcctacgggaacctcggggacgtgtttgtgtgtcggggggatccacccggagcgctcaag
ttctaccagcagcagctggctgtggctcagaaagctgccgaccagaagatggaagccgac
gcgtatgctgcactgggatcagttcacaggctgctccgccagctggacgctgccctgtcc
ttccacagccgggagctgactctccgtaaggatctggccgacccccagggggagtgccgg
gcgcttggccgcctggcggcggtccacatggcgctgggcgactacaccacgaccttccag
tgctatgaggcccagctggggctagcgcagggcctccgggacgcccgactggaggcgcag
gtccacgggaacatgggcatcaccaagatgaacatggcggtgttcgaagaagccatcgga
tacttcgagcagcagctggccatgctgcagcagctgagcggcagcgagggcatgctggac
agaggcagggcctatgggagcctggccgactgctacgatgccctgggagactacgaggag
gccatccagtactacgagaagtacctgacggtggctcagagtctcaaccacgtccaggac
caagagaaggcctacagaggcctgggaaacgcacacaggtccttgggcagtctccagcag
gcactggtgtgcttcgagaagcggttggtggtggcccacgagctgggcggcgagggtggg
gggaaggcgcaggcttacggggagctgggcaccctgcacagccagctggggaactacgag
caggccctgtcctgtctggagcaccagctcagcatcgctcgctcagcaggggataaatcc
ctggaggccgaggcgagcggcgctctgggaggcgtttatcagctgatggcagacaacgaa
actgctctgcagtggcaccagagggcgctgagcatcgccgagcagacgggctgcgtgagg
agccagggccgcgcctacggcaacctgggcctgacctacgaggctctggggaactacgag
cgagccgtggtgtttcaggagcagcacctcagcgtggcggcgcagaccaacgacctgacg
gccaaaactatggcctacggaagcctggggaggacacaccacgccctgcagaactacact
caggctgtgatgtacctgcaggaaggtctgcggctggctgagcaactgagccggagagag
gacgaagccaagatccgccatcgcctcgggctttcactgagggccggcggcaacctggag
gaggcacagcaccagctgtacagagcttctgcgttgttcgagacaatccgccatgagacg
caacacaacctggattacaagctgtccttgtttgatctgcaaaccagctcgtatcaggct
ctccagagagtcctcgtcagcctagggcggcacgacgaggctctggccatagccgagcgg
gggcgcactcgagcgtttgccgatctgctggtggaacgccagagaggaagtaggcaagcg
gccggcgccgacccttacatcccggtcaccgtggagcacatcctggagacggtcaacggt
cagaaggggctgatcctctactattcgctggctggaggctttctctacagctggctcata
tctccaggcacaggcatcgtgaagttcaatgaggcgtacctgggagaggcggggcccgag
gcctctgagttccaggatggcagtgggagcccacacggtggaggccccgtgtctctggat
cagtacatctgcaacgccagagaggctctgggagtggacagccatcacagcagagtgtgc
tctggcagtgagacggagagtgaagctggagatctgctggagcaacagtttgaggagctg
aacaacaatctggcctccgccaccgatccaaccggctacctccgcatggtgtccagaaat
aaccgcttcaacaggagctgtcggagcatgacgagcctttacagctccaccgtgtctcca
gtgaaggacggcttatctccagtttgccgaccgtctaacgttggcaaacctcctctacga
gccctctacgacctactcatcgctcccatggaagggggtctgatgcacagcagtggatct
gttggcaggaacaggcagcttgtggtagttctggagggagaactgtacctgatccccttt
gccttgctgaaaggcagctcctccaatgagtacctgtatgaaaggtttaacatcatttct
gtaccgtctctggccagcctgcaggctacaagtaagcctaactctcgccccagcggtccc
ctgctgtgtccggacggagggtcggtggccgccgtggtcggggcccctcagctgcctccc
agcgtcatggaccgctggctgtgggggcccttaccctcggcccaggacgaggctctgtct
ttgggtgaacagctgggctgtcacccccttaccggggcaaacgccaccaaggagcgcgtc
ttagcggcgctgagtcaggccgagtgcgttcactttgcgacccacacgtcctggaagctc
gccgccatcgtcctgtcccccaaccatgagcgaagcgccggagacgggccgcaggagaac
gctctgcgcgggacagcggcgttagcggacggcgcggaccacgaggggaaggtcgagcgt
ttgtttcccaggagtcacagcagcccagagagactccgaggagcggaagaaagaagcgag
gacggggagagtgtttgcggagtggagagtctgtgcgacagcacgccgctccacgacttc
ctcctcactgccgccgacatcctggacctgtgcctctcggtcaagctggtggttctgagg
tcatacccggagtctagctgtagagtgacggctgacggagtggtgggtctgacccgggcc
ttcttggctgcgggcgttcagtgtgtgtgcgtgtctctgtggccggtgcaggtcgctgct
tccaagctcttcatgcacacgttctacacggcgctgctaaacggcagcaaagccagcgtg
gctctgacggaggccatgaggaacctgcagagcagcaagcacttctcacacccctccaac
tgggctggttacctgctgataggcagcgatgtgaagctgaacagccccatgtcgctggtg
ggtcaggccctggcagagatcctgcagtacccagagaaagcccgggacgccctcagggtg
ctgctgcacctggtagaaaagtcactgcagcgcattcagagcggtcactgcaaccccatg
tacacgtcgcagcagagcgtggagaacaaggtcggcggcgttcctgggtggcaggccctc
ctgtccgctgtgggcttccagctggaggtctccggctgcggtggcggactccctgcggcc
gtgttcttcccgacctctgaccccggagaccgtctgcagcagtgcagcaccacgctgcag
gctctgctcggtctgactcctccggctctgcaggctctatgtaagctggtcacaacatct
gaagcaggagagcagctcattcacaaggccgtgaaaagcatggtggtgacgcttcatcag
gtcctggtgcagctgcagtccggcgacaaagagcaagacttccccctggctcccatccag
gtgtcgattagcgttcagctctggaggctgccgggctgccatgagttcctggctgctctg
ggttttgatctgtgcgaggtcggtcaggaggaagtcgtgttaaagacgggaaaacaggcc
agcagacgtaacatgcatttcgcccttcaggcccttcttgccctgtttgactccacggag
cttcccaagcgactgagcatggacagttcgtcgtctttagagtctctgtcatcctcccag
tcggcctcccagcctcagtctttgcccctctctctcagctgttaccctccccagccctcc
ttcttaccccccggctgctccgacaacctctcctgcgacgccatctccgtctacagcctc
agctccctcgcctcctccctcagcttcctgtctcggcccgagccagcgggaagtgacatc
atcagccatcgctcgcatcaacaggagccagagaagcagggtggaggaacgggtctgtac
tactcctcgcaacgcctggcaagaggccggctggccaatcacggaggagcgtcggcagga
ggagaggacgaggagtacgagggcttctccattataagcagcgagccgttggggcgggcg
gggagggagtgcgacacactcccgctccctgcgggacaccggcagggcagaggtggttca
ggcagagggtctgcggtgggccagactctgatagtttcctccaaggggagcatcagcaca
cctacgtccccgctcaaagctccaccgctggcgctgctggaccatccaagctgccaggtc
acccaacaaatctcattgcccacacggacagttaaaggaaaggttagcagctccgagtcg
gaccaatcgagcaccgaaacggacagcactgtcaaatcccaagaagagaggatgggcccc
gccggacaactggatccccacgaattggcccagaagatcctggaggagacccacagccac
atgcaagctgtggagacgctgcagaaagcaaacaccagagtgacatctctgagaggagcc
gggggccgacaagaccctcacaccaggcaaccgtctctgtctacccccacgaccccgacc
tttaaacccaccagaggggcgcgtgggttccagccgtccgagaccagtgcgttcagcaga
cctcccagcagggctagtctgaaggccggctcgtccccttttaccgtccataagcacctt
tcaccccatgcctctgattcgaggcctcctccaactcctcccaaaccaccgtcccgctcg
tcatcgctgcagaaaatcaacacgtccgcctcttcttctccttcttcatctctcctagct
aaggagaagaagtcccccgtcgtctcacaacacaaacccaaatactccggttcaccttac
agctgccacatatcgccgtctcgctctcctgctgatagcgcctcatctccagccctctcc
tactcctccagaggctccgtctcggcagcgtccagcccgactgacccttcggagctcagc
cagtcaaagcaggacaaggtccaggcgatgcacaacctgaagaccttctgggccggcgtc
ggccagaaacaggaggtgcccggccgtttggcgtcgctccgaggcggcgacaaaaaaatg
agtacagttcagaaagacgttttgggtttgctgaacctctcacccagacacgggtctggt
aggaaacacgcggacagacaggaagaccacgacagacccaatgggcaccgcaagctggag
cccaaacctccacttgctccatcagccgatcttccaacaaaccacaaaggaggcttcaaa
cttccctctgggaacggatacaagtttctctcacctggacagttttgtccatcttctaaa
tgttaa
DBGET
integrated database retrieval system
