Poecilia reticulata (guppy): 103473255
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Entry
103473255 CDS
T05149
Symbol
sbno1
Name
(RefSeq) protein strawberry notch homolog 1 isoform X1
KO
K26273
protein strawberry notch
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pret03036
]
103473255 (sbno1)
Chromosome and associated proteins [BR:
pret03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
103473255 (sbno1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
103473255
NCBI-ProteinID:
XP_008421571
UniProt:
A0A3P9PWR6
LinkDB
All DBs
Position
LG12:3601498..3622507
Genome browser
AA seq
1405 aa
AA seq
DB search
MDPGQDLLLAALSESGICPNDLGLLDVDSQDVMHPSTAQQSISINALDVGVGAESVEVVR
SEPQTAVPVVTIRQHKPQPSTTTFVLNQLNQLPSLGTTATKQSVTNPIKHTITVTKVVHV
ASSGLRASATPPPTSVPPSVSTLVPSNKDQIQLKDLLRPNNVKTTILKGNSLMELMRLKP
PPDIAPPVATATATGAGEINNGIKKEVLGKDAARIWIKDDIKMLNFSNTLKAAGLKEEDE
HEEEEEEELGHAETYAEYMPMKLKIGLRHPDSVVETSSLSSVSPPDVWYRLSIPEEAIDR
GCLSALQLEAITYAAQQHETFLPNCDRAAYLIGDGAGVGKGRTIAGIIYENYLLGRKRSL
WFSVSNDLKYDAERDLRDIGAKNIQVHSLNKFKYGKISSKHNGSVKKGVIFATYSSLIGE
SQSGGKYKTRFQQLLHWCGEDFDGVIVFDECHKAKNVCPIGSSKPTKTGLAVLELQNKLP
KARVVYASATGASEPRNMAYMNRLGIWGHKTPFREFGNFIQAVERRGVGAMEIVAMDMKL
RGMYIARQLSFTGVTFKIEEVPLTQQYVHMYNKSVRLWVGAREKFQQAANLMEAEQRMKK
SMWGQFWSAHQRFFKYLCIASKVRRVVQLAREEVQNGKCVVIGLQSTGEARTLEALEEGG
GELNDFVSTAKGVLQSLIEKHFPAPDRQKLYSLLGIDLSAKKTPSPAENAAQPEQKGKKR
KGSEAKKQPKKKPRKHGGLSGTSSEESESEESDRESGKDSDDSFKSVSSGDEDDDFNPFR
DESDEDEEDDPWLIRKEPKKGKKEKKKKRRKSIDPDSIQSALLASGLGSTRPGFTASVNP
PLTPATVKTESQESYLTSQDSVELAQKMKKQLLEQLEGLAEDLPPNTLDELIDELGGPEN
VAEMTGRKGRVVSNDDGSITYESRSELDVPVEILNLTEKQRFMDGEKNIAIISEAASSGI
SLQADRRVKNQRRRVHMTMELPWSADRAIQQFGRTHRSNQVTAPEYVFLISELAGEQRFA
SIVAKRLESLGALTHGDRRATETRDLSRFNFDNKYGRNALEIVMKSIVKLDVPLVPPPSD
FKGDFFREIQSGLIGVGLINVEDRSGVLTLDKDYNNIGKFLNRILGMEVQQQNALFQYFS
DTLAAVIQEAKKNGRYDMGILDLGSGDEKVKKVDCRKFLTPSYTTSGHVELYTVGVERGM
SWEEATHAWAEQNGPDDGFYVQMRNNRKTAILVKEVNTKKRLFLVYRPNTGRQVKLETYA
DIKKKFKKVLSEDAKQHWTDQYQSSAKICSHAYWRGNCKKASVGLLCEIGLRCRTYYVLC
GSVLSVWNELEDVLSPVSGSNVKVQIVRLRTEDGQRIVGLIIPANCVSPLINKLSTSDQS
QQLAVQEQQKRQLLHPQSLTHVLNT
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atggatcctggacaggatttgctcctcgctgctttaagtgagagtggaatttgcccaaat
gatctcgggctcttagatgtggattctcaggatgttatgcatccttctacagcccagcag
tccatttccatcaatgctctggatgttggtgtgggagcagaatcggtggaagttgttcga
tctgagcctcaaactgcagtcccagttgttacaatcagacagcataaacctcagccatca
acaaccacatttgtcttaaatcaactgaatcagttgccgtcattagggaccactgctacc
aagcagtcagtcaccaacccaatcaaacataccataacggtcaccaaggtggtccatgtt
gccagttcaggactgcgtgcttcagcaacccccccacccacaagtgttcctccgtcagtg
tccacgctagtgccttccaacaaagatcagattcagctgaaagacctccttcggcccaac
aatgtgaaaaccaccattttaaagggcaacagtttgatggagctgatgagacttaaacct
ccacctgacatcgctccacctgtggcaacggctacagcaacaggcgcaggtgaaataaac
aatggaatcaagaaagaagtgttaggcaaagatgctgccaggatctggatcaaagatgac
attaaaatgctaaacttttcaaatactctgaaagctgcaggcctaaaagaagaggatgaa
catgaggaggaagaagaagaggagttgggtcacgcagagacgtatgcagagtacatgcct
atgaaattaaagatcggcctgaggcatccggattctgtggtggagaccagctctctgtcc
agcgtcagccctccagatgtttggtacagactgtccatcccagaggaagccattgatcgg
ggctgcttgtcggcactgcagctagaggcgatcacatatgctgctcagcaacatgagaca
ttcctacccaactgcgaccgagctgcctatttgattggagacggagccggtgtggggaaa
ggccggactatcgcagggatcatttatgagaactaccttctgggcagaaagagatcactt
tggtttagtgtctctaatgatttaaagtatgacgctgaaagggatttgagggacattggc
gccaagaatatccaggttcactcactaaacaagtttaaatacggcaaaatatcctccaaa
cataatgggagtgtgaagaaaggggtgatcttcgccacctactcgtctttgataggagag
agccagtcaggagggaagtacaagaccagattccaacaacttctccactggtgtggggaa
gactttgatggagtcattgtgtttgatgaatgtcacaaagctaaaaacgtttgtcccatc
ggctcctctaagccgactaagaccggcctcgccgttttggagctgcagaacaaacttccc
aaagctcgggttgtgtatgccagcgctactggagcctctgagccacgaaacatggcgtac
atgaaccggctgggaatatggggtcacaaaacaccgtttagagagtttggcaactttatc
caagcagttgaacgcagaggtgttggtgccatggaaatagttgctatggacatgaaactc
agagggatgtacatcgccagacagttgagttttacaggcgtgactttcaagattgaagaa
gtccctctaactcagcagtacgtccacatgtacaacaagtctgtgaggctgtgggttggc
gcacgtgagaagttccaacaggccgccaacctgatggaagcagagcagcgcatgaagaag
tccatgtggggtcagttctggtccgcccatcagaggttcttcaaatatctctgcattgcc
tccaaagtacgccgggtggtccagttagccagagaggaagttcagaacggaaagtgtgta
gtgattggtctgcagtccactggtgaggcgagaacactggaagccttggaggaaggagga
ggagagctcaacgactttgtgtcaacagcaaaaggtgtgctgcagtccctgatagagaag
cacttcccagctccagacagacagaagctttacagcctgctaggcatcgacctctctgca
aaaaaaactccctctcctgctgagaatgcagcacagccggaacaaaaaggaaagaagagg
aaaggttcagaggccaaaaaacagcctaaaaagaagcctcgcaagcacgggggtctgtct
ggtacaagttcagaggagagcgagtctgaggaatcggaccgagagtctgggaaagacagc
gacgacagcttcaagtctgtcagctcaggagacgaagacgatgacttcaatccattcaga
gacgagtctgacgaagatgaggaggacgatccctggctaatcagaaaggagccaaagaaa
gggaagaaggagaagaagaagaaaagaaggaagagtattgatccggactcgattcaaagt
gccttgttagcctcggggctgggctccaccaggcccggtttcaccgcctcagtgaacccc
cctcttactcctgctacagtcaaaacagagagccaggaaagctacctaacgagtcaggac
tcggtggaacttgcccagaaaatgaagaaacagctgctggaacaactggaggggttggca
gaagatctgcctccgaacaccctggatgagctgatcgacgagctgggagggccggaaaac
gtagcggagatgaccggtcgtaaaggtcgcgtggtcagtaacgacgacggcagcatcacc
tacgagtcccgctctgagctggatgtccctgtagaaatcctcaacctgactgagaaacag
aggttcatggatggagaaaagaacatagccatcatctcggaagcggccagctccggtatt
tccctgcaggccgatcggcgcgtgaagaaccagaggaggagagtccacatgaccatggag
ctgccgtggagcgcagacagagccatacagcagtttgggcgaacgcacagatcaaatcag
gtcacggctccagagtacgtctttctcatatcagaactggcaggagagcaaagatttgca
tccattgttgccaaaagactggaaagcctgggggctctcactcatggagaccgacgggcg
acagaaactagagatctgagcaggtttaactttgacaacaagtacggcagaaacgctctg
gaaattgtgatgaagtcgatagtaaagctcgacgttccgctggtgccaccaccctcagac
ttcaaaggggatttcttcagagagattcagagtgggctgataggtgtgggcctcataaat
gtggaggacagatctggagtgcttacactggacaaagactacaacaacatagggaaattc
ctgaaccggatattgggcatggaggttcagcaacaaaatgccttgttccagtatttctct
gacactctggcagcagtgattcaggaagccaagaagaatggcagatatgacatgggcatt
ctggatctcggctcgggtgacgagaaggtgaagaaggtggactgtcgaaagtttctgacg
ccaagctacacaacatcaggacacgtagaactctacactgtcggcgtggaaagaggaatg
tcttgggaagaagcgacacacgcctgggcagagcagaacggcccagacgatggcttctat
gtccagatgagaaataacaggaaaacagccatcctggtgaaggaagtgaacactaagaag
aggctgttcctggtctacaggccaaacaccggcagacaagtcaaactggaaacatacgcc
gacatcaaaaaaaagtttaagaaggttctgtcagaagatgccaagcagcactggactgac
cagtaccagtcatcagcaaaaatatgctctcatgcgtactggcgaggcaactgcaagaaa
gcctcagttggtctgctgtgtgaaattgggctgcgctgcaggacgtactacgttctgtgt
ggctctgtgctcagcgtgtggaacgaactggaagacgttctttctccagtcagcggaagc
aacgtgaaggtgcagattgtccgcctgcgcaccgaagacggtcagaggatagtcgggttg
atcattccagcgaactgcgtgtctccattgatcaacaagctctcgacctcagaccagagc
cagcagctggctgtgcaggagcagcagaagaggcagctgctccaccctcaaagtcttact
catgtgctcaacacataa
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