Poecilia reticulata (guppy): 103473484
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Entry
103473484 CDS
T05149
Symbol
nup54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103473484 (nup54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pret03019
]
103473484 (nup54)
Messenger RNA biogenesis [BR:
pret03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103473484 (nup54)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
Motif
Other DBs
NCBI-GeneID:
103473484
NCBI-ProteinID:
XP_008421998
UniProt:
A0A3P9N5H3
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Position
LG12:9854490..9861810
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AA seq
621 aa
AA seq
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MAFSFGGAATNTGAGTSGFSFGQFGAKTTASTTFGFNPTATTTTASSGFGTLTAPAFGAA
TTTAAPATGFSFGASNTGFGGLGAGSTTAGGFSFGGFGLNANPAAISFSAGCFGTATTTG
SVFNFGNSLASTGPFGGFGTTTTTAAAPGSTFNFAPSNTTGGLFGNTQNKGFGFPSGLGT
GTTTGATGFGTGLGTTGLGFGSFNIQPTQQQQGGLFGQPAQQQGQAQPTQLYQQVTALSA
PTLLGDERDSILAKWNQLQAYWGTGKGYYVNNNLPVDFTQENPFCRFKAVGYSCVPVSKD
EDGLVVLVLNKKEPDTRAQQQQLVESLHKVLGSNQILTVNVEGVKALPNDQTEVIIYVVE
RSPNGTSKRIPASTLFAYLEQSGIKAQLTQIGVIMSVTRTELSPAQLKQLLQNAPAGVDP
IIWEQAKVDNPDPEKLIPVPMVGFKELLRRLQIQEQMTKQHQTRVDIISNDISELQKNQA
TTVAKIAQYKRKLMDLSHRVLQVLIKQEIQRKSGYAIQVDEEHLRVQLDTIQSELNAPTQ
FKGRLNELMSQIRMQNHFGAVRSEERYNVDADLLREIKQHLKQQQEGLSHLISVIKDDLE
DIKLVEHGLSDGGHMRGGILS
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcagttttggcggtgccgcgactaacacaggggcagggacgtccgggttttca
tttggtcagtttggtgccaaaaccacagcttcaacaacgtttggttttaacccgacagcg
accactaccaccgcttcttcaggctttggcactctgacggctcctgcttttggcgcagcc
acgactacagctgcaccagccacgggatttagttttggtgcctccaacacaggatttggg
gggcttggagctggaagcaccacggctggtgggtttagctttggggggtttggtttaaat
gcaaacccagcagcaatcagcttcagtgcaggttgcttcggtacagcaaccacaactggc
tctgttttcaattttggtaatagcctggctagcacaggtccatttggtggctttgggaca
actacaacgactgctgccgcaccaggatccactttcaactttgccccctccaacacaaca
gggggcttgtttggtaacacgcagaacaaagggtttggatttccatctggactcggaact
ggtaccactactggagcgacgggctttggaactggattaggaacaactggcctcggtttt
ggaagttttaacatccagccgacacaacagcaacaaggaggcttgtttggccagccggcc
cagcagcagggtcaagctcagccaacccagctttaccagcaagtgaccgctctgtcagcc
ccaactctgctgggagacgaacgggattccatacttgcaaagtggaaccagttgcaggcc
tactggggaacagggaagggctattatgttaacaacaacctgccagtggactttactcag
gagaaccctttctgcaggttcaaggcagtggggtatagctgtgtcccagtaagcaaggac
gaagatggtttagtggtgttggtgctgaataaaaaggaacctgacacccgtgctcagcag
cagcagctggtcgagtcgctgcacaaggttctgggaagcaaccagattctgaccgtcaat
gtagagggtgttaaagctctgcccaacgatcagacagaagtgatcatttatgtggtggag
cgttcccccaatggcacctccaagaggatcccagcttccacactcttcgcctacctggag
cagtccggcatcaaggctcagctcacccagattggagtgatcatgtcagtaacgcgcaca
gagctgtccccagcacagctgaagcagctgctgcaaaacgctcctgcaggtgtggatccc
atcatttgggaacaagctaaggtggacaaccctgacccagagaagttaatccccgtaccc
atggtgggtttcaaggagctgctccgcagattgcagatccaggagcagatgaccaagcaa
caccagaccagagtggatataatctccaacgacatcagtgagctgcagaagaaccaggcg
acaactgtagccaagattgctcaatacaagaggaagctgatggatctgtctcacagggtg
ctgcaggtactgataaagcaggagattcagagaaaaagcggctacgccatccaagtggat
gaggagcatctgagggtgcagctggacaccattcagtcagaactcaatgcacccacacag
ttcaagggtcggttgaatgagctgatgtctcaaattcgaatgcagaaccactttggagcc
gtgagatcagaagagcgctacaacgtcgacgcagacctgctccgagaaatcaaacaacac
ttaaagcagcaacaagaaggtttaagtcacctgatcagcgtcatcaaagatgacttggag
gacatcaaactcgtagaacatggactaagcgacggcggccacatgagagggggcatcctg
agctga
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