Poecilia reticulata (guppy): 103473599
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Entry
103473599 CDS
T05149
Symbol
pus1
Name
(RefSeq) tRNA pseudouridine synthase A, mitochondrial
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pret03016
]
103473599 (pus1)
Enzymes [BR:
pret01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
103473599 (pus1)
Transfer RNA biogenesis [BR:
pret03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
103473599 (pus1)
Prokaryotic type
103473599 (pus1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-GeneID:
103473599
NCBI-ProteinID:
XP_008422176
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All DBs
Position
LG12:complement(13785480..13788178)
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AA seq
417 aa
AA seq
DB search
MFKTRPLLSALVNYRQLLETNGLKFLCTMSEEARDQETAKLLKRPNEVNEDSAESATKRI
KAEGGHNEDDKRYPKKKVVLLLAYSGKGYYGMQRNPGNSQFRTIEDDLVTALVKSGCIPG
NHGDDMRKMSFQRCARTDKGVSAAGQVVSLKLRLIEDIIEKINENLPPQIRVLGLKRVTQ
GFNSKNNCDARTYAYMLPTVAFSPKDYDTENIASFRLEAETLQKVNQLFALYKGTHNFHN
FTSQKAPSDPSARRYITEMSCGEPFVRNSYEFAVITVRGQSFMLHQIRKMIGLVIAVIRG
FAKEEVMERSWGQEKVDVPKAPGLGLVLERVHFDRYNKRFGGDGLHERLEWAREEEAIKA
FKEAHVYPTIVKTECEEGSMVSWMATLPSHDFEATVTGTQDNKDQKQENADEGNGSD
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaaccagacccctgttaagtgccttagttaactacagacagttgttagagaca
aacggtttaaagttcttgtgcacaatgagtgaagaagccagagatcaagagacagccaag
ctgttaaaaaggccaaatgaggtgaatgaggactcagctgagagcgccacgaagagaata
aaagcagaaggggggcacaatgaagatgacaagaggtacccaaagaagaaagtggtcctt
cttttggcatattctggaaagggatactatggcatgcagagaaatcctggaaactcccag
tttagaaccattgaagatgatctggtcactgctctagttaaatctggctgcattcctgga
aaccacggtgatgacatgaggaagatgtccttccaaagatgtgccagaacggataagggt
gtttctgctgctggtcaagtggtttcactgaagctccgtttgattgaggacataatagaa
aaaatcaatgagaatttaccaccacagatcagggtgcttgggctcaagcgagtgacccag
ggatttaattccaaaaataactgtgatgcccgtacgtacgcctacatgctcccaaccgta
gccttttctcctaaagactatgacaccgagaacatagcttcatttcgtctagaagcagag
actcttcagaaggtgaaccaactttttgccctctacaaaggcacccataacttccacaac
ttcacctcccaaaaggctccaagtgaccccagcgcccgccgctacatcacagagatgtcc
tgcggagagccttttgtccgcaacagctacgagtttgccgtgatcaccgtgcgaggccag
agctttatgctgcaccagattcgcaagatgatcggcctggtgatcgcagtgatcagaggc
ttcgccaaggaggaggtgatggagcgaagctggggtcaggagaaggtggacgtcccaaaa
gctccgggactcgggctggtactcgagagggttcactttgatcggtacaacaagcggttc
ggaggggacggtctgcatgagcggctagagtgggctcgcgaggaggaggcaatcaaggcc
ttcaaagaggctcacgtatatccgaccattgtcaagacggaatgtgaggagggctccatg
gtcagctggatggccactcttcccagccatgattttgaagcaacagttactggaacacaa
gacaataaggaccaaaaacaggagaatgcagatgaagggaacggctccgattag
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