Poecilia reticulata (guppy): 103473769
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Entry
103473769 CDS
T05149
Name
(RefSeq) PDZ and LIM domain protein 5-like isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
103473769
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pret04990
]
103473769
Domain-containing proteins not elsewhere classified [BR:
pret04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
103473769
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Gene cluster
GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
LIM_FHL2-3_N
PDZ_2
Motif
Other DBs
NCBI-GeneID:
103473769
NCBI-ProteinID:
XP_008422469
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Position
LG12:16617221..16659874
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AA seq
611 aa
AA seq
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MNSSYSVSLAGPAPWGFRLQGGKDFCLPLTISRLTDGGKAVKAGMNIGDIILSINGISSE
GMNHLEAQNKIKACTGNLSLTLQRASAVSKEESHKEEPQEIIKPVPITHPAPSTTYTKPP
SQPTPLYNKTARPFGGSGSGVAASSSPTAPKVASIPSESSAFTPAAPSQPPQPPFALKSS
LPASDSAVVNSAPKIGPGRSAFTSPSASSTSSNSSSPRVTAPPSHPNVPQPSVYNTPINL
YSNANACEVAVGQRRGLLESQGLSEHVNGKAGVDLEKSVSPLSDASKKRLIEDTEDWHPR
TGTSQSRSFRILAQMTGTENEQLPENGKKESADQTAPSVHTSPAAKTYSNSAAAPRNGSV
VPGSTFKTPAQNKASFQPGGSAGFSKVGAGPSFGKIVSPAQKELDRPTPQPHPEDLNSLV
QRAEHIPAGTRTPMCCKCNKVIRGPFLVAMGMSWHPEEFNCAHCHSSLAERGFVEEKNQV
YCVHCYEQFFAPTCASCNQKILGEVMNALKQTWHVSCFVCAACHQPIRGNTFHMEDGQPY
CERDYYTMFGTNCHGCDFPIEAGDKFLEALGFTWHDTCFVCVVCSTSLEGQPFFSKKDKP
LCKKHAHSVNI
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcagctacagtgtctccctggccggccccgccccgtggggctttagactgcaa
ggagggaaggacttctgcctgcccctcaccatctcacggttgactgacgggggcaaggca
gtcaaagccgggatgaacattggagatatcatcctttccattaatgggatttcctcagaa
ggcatgaatcaccttgaggctcagaacaagattaaagcctgcacaggcaacctcagtctc
actctacaaagagcctccgctgtctcgaaagaggaatcgcacaaggaagagcctcaggaa
atcattaagcctgtgccgatcactcaccccgcgccgagcaccacatacaccaaaccacca
agccagcccactcctttgtacaacaagacagctcggccttttgggggcagcggcagtggg
gttgctgcgtcttcctccccgactgctccgaaagttgcctctattccttccgaatcatca
gctttcaccccagccgctccctctcagcctccacagcctccctttgcattgaagtcgagc
ctccccgcttcagattcggccgtagtaaactctgcccccaaaatcggccccggccgttct
gccttcacctccccctctgcctcatccacttcatctaactcatcttcacccagagtgacg
gcccccccttcccatcctaatgtcccgcagccctctgtctataacacacctatcaacctg
tactccaacgccaatgcttgtgaagttgctgttggacaaaggcgaggccttttggagagc
cagggtctctcagagcatgtaaatgggaaagctggtgtggatcttgaaaagagcgtgtcc
cctctgagtgacgccagcaaaaagcgtcttattgaagacacggaggactggcacccacgg
actggtacctcccagtctcgctccttccggatcctcgcacaaatgactggcactgagaac
gaacaattgccagaaaatggaaaaaaagaatcagctgaccaaaccgctcccagtgttcac
acatcacctgctgcaaaaacatattccaattctgcagcagcacccaggaatggcagcgta
gtccctggatctacatttaagactcctgctcagaacaaagcctccttccaacctggaggt
tctgcaggcttttctaaagtgggagcaggtccctcatttgggaaaatagtcagtcctgct
cagaaagaactggaccgccccactccacagccacatcctgaggatctgaactctttggtg
cagcgtgctgagcatatacctgctggtacccggaccccaatgtgctgcaagtgcaacaaa
gtcataagaggcccgttcctcgtggccatgggcatgtcctggcaccccgaggaattcaac
tgtgctcactgccactcctccctggcagaacggggatttgttgaagagaagaaccaggtg
tactgtgtgcattgctacgagcagttctttgctcccacttgtgccagctgcaaccagaag
atccttggggaagtcatgaatgccctgaagcagacctggcatgtgtcctgttttgtctgc
gctgcctgccaccagccaatcagaggcaacacatttcacatggaggacggacagccgtac
tgtgaaagagactactacaccatgtttgggaccaactgccacggctgcgacttccccatc
gaggccggagacaagttcctggaggcgctgggtttcacctggcatgacacctgttttgtg
tgtgtggtttgctccaccagcctggaaggccaacctttcttctccaagaaggacaagcct
ttgtgcaagaaacatgctcactctgtcaacatctga
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