Poecilia reticulata (guppy): 103474036
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Entry
103474036 CDS
T05149
Symbol
vldlr
Name
(RefSeq) very low-density lipoprotein receptor
KO
K20053
very low-density lipoprotein receptor
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pret04131
]
103474036 (vldlr)
Membrane trafficking [BR:
pret04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
103474036 (vldlr)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
hEGF
Motif
Other DBs
NCBI-GeneID:
103474036
NCBI-ProteinID:
XP_008422976
LinkDB
All DBs
Position
LG12:complement(24727913..24744051)
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AA seq
738 aa
AA seq
DB search
MRTCRVNEFSCGPGTTLCIPIFWKCDGEKDCDKGEDEVNCGNVTCALNEFTCASGRCVSR
NFVCNGEDDCGDGSDEVDCAPSSCAPNEFQCGNASCIPANWVCDDDVDCQDQSDEAPARC
GRHPTPPAKCLPSEMQCSSGECXHKKWRCDGDPDCKDGSDEANCPARSCDPDKFKCDDGS
CIQGSRQCNGYRDCDDGSDEMNCRNLTQCNGPEKFKCRSGECIEMSKVCNKIRDCPDWSD
EPINECNVNECLLNNGGCSHICKDMVIGFECDCTPGLQLIDHKTCGDINECMNPGICSQI
CINLKGGYKCECHNGYQMDPATSVCKAVGKEPCLIFTNRRDIRRLGLERKEYTQIVEQQR
NAAALDADFNQQTIFWADLGQRAIYSTVLDRRGDVGVHKKVIDNVQTPLGIAVDWIYNNL
YWSDLGAKTISVANFNGTKRKVLFNTGLREPASIAVDPLSGFLYWSDWGEPAKIEKSGMN
GADRQVLVATDIQWPNGITLDLIKGRLYWVDSKLHMLSSVDLNGDNRNKVLQSADYLVHP
FAVTVFEDRVFWTDGENKAIYGANKFSGSDVVTLASNLNDPQDVIVYHELIQLAGTNWCT
ERSENGGCSFLCLPAPQINKHSPKYSCVCPAGQELAADGQRCRPEANVSTSIQVDSTARG
SAAAWAVLPVLLLAMAGAGAYLMWRNWQLKNQKSMNFDNPVYLKTTEEDLNIDITRHGAN
VGHTYPAISIVSTDDDLS
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgaggacgtgtcgtgttaacgagttcagctgcggcccgggaaccacgctttgcatcccc
atcttctggaaatgtgacggagagaaggactgcgacaaaggagaggatgaagtcaactgt
ggtaacgtcacctgygctctgaacgagttcacctgcgccagcggccgctgcgtctccagg
aactttgtgtgcaacggcgaggacgactgcggcgacggctcggacgaggtggactgcgcg
ccgtcgtcctgcgctcccaacgagttccagtgtgggaacgcgtcctgcatcccggccaac
tgggtgtgtgacgacgacgtcgactgtcaggaccagtcagatgaagctccggctcggtgc
ggccgccacccgacgccgcccgccaagtgtttgcccagcgagatgcagtgcagctctgga
gaatgcrtccacaagaagtggagatgtgacggcgaccccgactgcaaggacggcagcgac
gaggcaaactgtcctgcrcggagttgtgacccggataagtttaaatgtgacgatggaagc
tgcatccagggaagcagacagtgtaacggctacagagactgtgacgacggatcagatgaa
atgaactgcaggaacctgactcagtgcaacgggccagagaagttcaagtgtcgcagcgga
gaatgtatcgaaatgagcaaagtgtgcaacaagatcagagactgtccagactggagcgac
gagccgatcaacgagtgcaacgtgaacgagtgtctcctgaacaacggcggctgctcccac
atctgcaaagacatggtgattggcttcgaatgcgactgcacacctggactgcagctcatc
gaccacaagacctgcggagacatcaatgagtgcatgaatcctggtatctgcagtcagatc
tgcatcaacctgaagggcggctacaagtgtgaatgtcataacggctaccagatggatccg
gctaccagcgtctgcaaggctgttggtaaggagccgtgcctgatcttcaccaaccgccgt
gatattcgccgtctgggtctggagaggaaggagtacacacagattgtagagcagcagaga
aacgcagcggctctggatgcagatttcaaccagcagactatcttctgggccgacctggga
cagagggccatttacagcaccgtcctggacaggcgaggcgacgtcggtgtccataagaag
gtgatcgataacgtccagactcctctgggcatcgctgtggactggatctataacaacctg
tactggtccgatctgggagccaaaaccatttctgtggcgaactttaacggaaccaaacgg
aaagttctgttyaacacgggcctgagrgaaccygcctccatcgcygtggatcctttatct
gggtttctgtactggtctgactggggagagccrgctaagatcgagaagtctggaatgaac
ggagcggaccggcaggttctggtggccactgacatccagtggcccaacgggatcacactg
gatctgatcaaaggtcggctctactgggtcgactccaagctgcacatgctcagtagcgtc
gacctgaacggagacaacaggaacaaagtgctgcagtctgcagattatctggttcatcca
ttygccgtcaccgtgttcgaggatcgggttttctggaccgacggtgaaaacaaggccatc
tacggggccaacaagttctctggttctgatgtcgtcacgctggccagcaacctgaacgac
cctcaggacgtcatcgtctaccatgagctgatccagctggccggaaccaactggtgcaca
gagagaagtgagaacggcggctgcagcttcttgtgtcttcctgctccacagatcaacaaa
cactcccccaagtacagctgtgtgtgtcctgcaggccaggagctggcagcagacggycag
cgctgcagacctgaagccaatgtgagcacgtctatccaggtggactccacagccagaggc
tctgctgctgcctgggccgtcctacccgtcttgctgctggccatggccggagccggcgcc
tacctgatgtggaggaactggcagctgaagaaccagaagagcatgaacttcgacaaccca
gtctacctgaaaaccacagaagaagacctcaacatcgacatcacgcgccacggcgccaac
gtgggccacacctacccagcgatttcaatcgtgagcacagacgatgatttatcctga
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integrated database retrieval system
