Poecilia reticulata (guppy): 103474056
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Entry
103474056 CDS
T05149
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-like
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03082
ATP-dependent chromatin remodeling
pret03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103474056
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
103474056
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pret01009
]
103474056
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pret03021
]
103474056
03036 Chromosome and associated proteins [BR:
pret03036
]
103474056
Protein phosphatases and associated proteins [BR:
pret01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103474056
Transcription machinery [BR:
pret03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103474056
SWI/SNF complex
103474056
Chromosome and associated proteins [BR:
pret03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103474056
PBAF complex
103474056
SWI/SNF complex
103474056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
Motif
Other DBs
NCBI-GeneID:
103474056
NCBI-ProteinID:
XP_017163256
UniProt:
A0A3P9NHH7
LinkDB
All DBs
Position
LG12:complement(25566926..25573959)
Genome browser
AA seq
368 aa
AA seq
DB search
MQLALSKTFGQKPVKFQLEEDGDFYMVGSEVGNYLRMFRGSLYKRYPSLWRRLASVEERK
KIMASSHATSVTLLKASECEEIFDGNDEKYKAVSISTEPPAYLREQKAKRSSQWVPTLPN
SSHHLDAVPSSTSINRNRIGRDKKRTFPLCFDDHDPAVIHENAAQAESLVPIRLDMEIDG
QKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAVASAIRQQIDSYPSDGLLEEQ
ADQRVIIKLNIHVGNISLVDQFEWDMSERDNSPEAFALKLCSELGLGGEFVTTIAYSIRG
QLSWHQRTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKKIRDQDRNTRRIRR
LANTAPSW
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgcagctagctctgagtaaaacatttggccagaaaccagtcaagttccagctggaggaa
gatggagacttttacatggtgggatcagaggtcgggaactacctgcggatgttcagaggc
tccctctacaagcgctacccgtcgctatggagacggctggcctccgtggaggagaggaag
aagatcatggcttcatcacacgccaccagcgtgacgctgctgaaggcctcggagtgcgag
gagatcttcgacgggaacgatgagaagtacaaggccgtgtccatcagcaccgagcctccg
gcgtacctcagggagcagaaggcgaagcgcagcagccagtgggttcccaccttacccaac
agctcccatcacctggacgccgttccgtcctccacctccatcaacaggaaccggattggc
cgcgacaagaagaggaccttccccctctgcttcgatgaccacgacccggcggtgatccat
gagaacgcggcgcaggcggagtcgctggttccgatccggttggacatggagatcgacgga
cagaagctgagagacgccttcacctggaacatgaacgagaagctgatgacgccggagatg
ttcgccgagatcctgtgcgacgacctggacctgaacccgctggccttcgtccccgccgtg
gcgtccgccatccgccagcagatcgactcgtatcctagcgacgggctgctggaggagcag
gccgaccagcgcgtcatcatcaagctgaacatccacgtggggaacatttctctggtggac
cagtttgagtgggacatgtcggagcgcgacaactcgccggaggccttcgccctgaagctg
tgctccgagctcggcctgggcggagagttcgtcaccaccatcgcctacagcatccggggg
cagctcagctggcaccagcgcacctacgccttcagtgagaacccgctccccacggtggag
atcgccatcaggaacaccggagacgccgaccagtggtgccccctgctggagactctgaca
gacgcagaaatggagaagaagatccgagaccaggacagaaacacaaggagaatcagacgt
ctggccaacaccgccccctcctggtag
DBGET
integrated database retrieval system
